RNA–Protein interactions for RNA: ENST00000590118.5

CROCCP3-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 4 BASIC

Gene CROCCP3, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-204ENST00000590118 NISCHQ9Y2I1 1504 aa35.85■■■■□ 3.33
CROCCP3-204ENST00000590118 ABCC9O60706 1549 aa32.87■■■□□ 2.85
CROCCP3-204ENST00000590118 CCDC180Q9P1Z9 1646 aa32.37■■■□□ 2.77
CROCCP3-204ENST00000590118 DNAJC5BQ9UF47 199 aa31.32■■■□□ 2.6
CROCCP3-204ENST00000590118 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
CROCCP3-204ENST00000590118 NACADO15069 1562 aa30.74■■■□□ 2.51
CROCCP3-204ENST00000590118 PABPN1Q86U42 306 aaKnown RBP eCLIP30.54■■■□□ 2.48
CROCCP3-204ENST00000590118 DCAF8L2P0C7V8 631 aa30.49■■■□□ 2.47
CROCCP3-204ENST00000590118 UNC13AQ9UPW8 1703 aa30.37■■■□□ 2.45
CROCCP3-204ENST00000590118 BICRAQ9NZM4 1560 aa30.2■■■□□ 2.42
CROCCP3-204ENST00000590118 MYO15BQ96JP2 1530 aa30.16■■■□□ 2.42
CROCCP3-204ENST00000590118 SHROOM4Q9ULL8 1493 aa29.71■■■□□ 2.35
CROCCP3-204ENST00000590118 CECR2Q9BXF3 1484 aa29.67■■■□□ 2.34
CROCCP3-204ENST00000590118 CC2D2AQ9P2K1 1620 aa29.67■■■□□ 2.34
CROCCP3-204ENST00000590118 ZCCHC6Q5VYS8 1495 aaKnown RBP29.6■■■□□ 2.33
CROCCP3-204ENST00000590118 DCAF1Q9Y4B6 1507 aa29.58■■■□□ 2.33
CROCCP3-204ENST00000590118 EIF4G1Q04637 1599 aaKnown RBP29.47■■■□□ 2.31
CROCCP3-204ENST00000590118 SCRIBQ14160 1630 aa29.45■■■□□ 2.31
CROCCP3-204ENST00000590118 DNAJC5Q9H3Z4 198 aa29.13■■■□□ 2.25
CROCCP3-204ENST00000590118 CUX2O14529 1486 aa28.53■■■□□ 2.16
CROCCP3-204ENST00000590118 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
CROCCP3-204ENST00000590118 NCAPD3P42695 1498 aa28.4■■■□□ 2.14
CROCCP3-204ENST00000590118 ATAD2BQ9ULI0 1458 aa28.23■■■□□ 2.11
CROCCP3-204ENST00000590118 HMGXB3Q12766 1538 aa28.12■■■□□ 2.09
CROCCP3-204ENST00000590118 SMARCA2P51531 1590 aa28.11■■■□□ 2.09
CROCCP3-204ENST00000590118 NESP48681 1621 aa28.1■■■□□ 2.09
CROCCP3-204ENST00000590118 SMARCA4P51532 1647 aa28.07■■■□□ 2.08
CROCCP3-204ENST00000590118 BAZ1BQ9UIG0 1483 aaKnown RBP27.91■■■□□ 2.06
CROCCP3-204ENST00000590118 THOC2Q8NI27 1593 aaKnown RBP27.9■■■□□ 2.06
CROCCP3-204ENST00000590118 BAZ1AQ9NRL2 1556 aaPredicted RBP27.85■■■□□ 2.05
CROCCP3-204ENST00000590118 LAMC3Q9Y6N6 1575 aa27.82■■■□□ 2.04
CROCCP3-204ENST00000590118 PEG3Q9GZU2 1588 aa27.81■■■□□ 2.04
CROCCP3-204ENST00000590118 KIF21AQ7Z4S6 1674 aa27.72■■■□□ 2.03
CROCCP3-204ENST00000590118 PDS5BQ9NTI5 1447 aa27.68■■■□□ 2.02
CROCCP3-204ENST00000590118 MROH2BQ7Z745 1585 aa27.62■■■□□ 2.01
CROCCP3-204ENST00000590118 TRIM41Q8WV44 630 aa27.61■■■□□ 2.01
CROCCP3-204ENST00000590118 CADPSQ9ULU8 1353 aa27.51■■□□□ 1.99
CROCCP3-204ENST00000590118 MRC2Q9UBG0 1479 aa27.46■■□□□ 1.99
CROCCP3-204ENST00000590118 WDR62O43379 1518 aa27.41■■□□□ 1.98
CROCCP3-204ENST00000590118 WIZO95785 1651 aa27.27■■□□□ 1.96
CROCCP3-204ENST00000590118 CEP164Q9UPV0 1460 aa27.25■■□□□ 1.95
CROCCP3-204ENST00000590118 FANCD2Q9BXW9 1451 aa27.19■■□□□ 1.94
CROCCP3-204ENST00000590118 OSCARQ8IYS5 282 aa27.18■■□□□ 1.94
CROCCP3-204ENST00000590118 CFTRP13569 1480 aa27.09■■□□□ 1.93
CROCCP3-204ENST00000590118 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
CROCCP3-204ENST00000590118 RSF1Q96T23 1441 aaPredicted RBP26.88■■□□□ 1.89
CROCCP3-204ENST00000590118 TOP2AP11388 1531 aaKnown RBP26.87■■□□□ 1.89
CROCCP3-204ENST00000590118 RIMBP3CA6NJZ7 1639 aa26.85■■□□□ 1.89
CROCCP3-204ENST00000590118 RIMBP3BA6NNM3 1639 aa26.85■■□□□ 1.89
CROCCP3-204ENST00000590118 RIMBP3Q9UFD9 1639 aa26.85■■□□□ 1.89
CROCCP3-204ENST00000590118 PRDM2Q13029 1718 aa26.76■■□□□ 1.87
CROCCP3-204ENST00000590118 ZNF608Q9ULD9 1512 aaPredicted RBP26.75■■□□□ 1.87
CROCCP3-204ENST00000590118 IFT140Q96RY7 1462 aa26.74■■□□□ 1.87
CROCCP3-204ENST00000590118 ARHGEF11O15085 1522 aa26.71■■□□□ 1.87
CROCCP3-204ENST00000590118 TOPBP1Q92547 1522 aa26.62■■□□□ 1.85
CROCCP3-204ENST00000590118 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
CROCCP3-204ENST00000590118 CYB5RLQ6IPT4 315 aa26.58■■□□□ 1.85
CROCCP3-204ENST00000590118 EIF4G3O43432 1585 aaKnown RBP26.55■■□□□ 1.84
CROCCP3-204ENST00000590118 ABCC8Q09428 1581 aa26.53■■□□□ 1.84
CROCCP3-204ENST00000590118 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
CROCCP3-204ENST00000590118 CHD1O14646 1710 aa26.46■■□□□ 1.83
CROCCP3-204ENST00000590118 AQRO60306 1485 aaKnown RBP eCLIP26.45■■□□□ 1.82
CROCCP3-204ENST00000590118 TRHP20396 242 aaPredicted RBP26.43■■□□□ 1.82
CROCCP3-204ENST00000590118 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
CROCCP3-204ENST00000590118 TARBP1Q13395 1621 aaKnown RBP26.42■■□□□ 1.82
CROCCP3-204ENST00000590118 FBLN2P98095 1184 aa26.37■■□□□ 1.81
CROCCP3-204ENST00000590118 POLA1P09884 1462 aaPredicted RBP26.31■■□□□ 1.8
CROCCP3-204ENST00000590118 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
CROCCP3-204ENST00000590118 TDRD9Q8NDG6 1382 aaKnown RBP26.21■■□□□ 1.79
CROCCP3-204ENST00000590118 SOGA1O94964 1423 aa26.2■■□□□ 1.78
CROCCP3-204ENST00000590118 SNAPC4Q5SXM2 1469 aa26.15■■□□□ 1.78
CROCCP3-204ENST00000590118 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.78
CROCCP3-204ENST00000590118 CHMP7Q8WUX9 453 aaPredicted RBP26.11■■□□□ 1.77
CROCCP3-204ENST00000590118 WDR97A6NE52 1622 aa26.1■■□□□ 1.77
CROCCP3-204ENST00000590118 SYNJ1O43426 1573 aa26.08■■□□□ 1.77
CROCCP3-204ENST00000590118 FGD5Q6ZNL6 1462 aa26.07■■□□□ 1.76
CROCCP3-204ENST00000590118 MAGI1Q96QZ7 1491 aaPredicted RBP26.06■■□□□ 1.76
CROCCP3-204ENST00000590118 AEBP2Q6ZN18 517 aaPredicted RBP26.02■■□□□ 1.76
CROCCP3-204ENST00000590118 GRIN2BQ13224 1484 aa26.01■■□□□ 1.75
CROCCP3-204ENST00000590118 SYNJ2O15056 1496 aa25.98■■□□□ 1.75
CROCCP3-204ENST00000590118 CUX1P39880 1505 aa25.98■■□□□ 1.75
CROCCP3-204ENST00000590118 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
CROCCP3-204ENST00000590118 PBRM1Q86U86 1689 aa25.86■■□□□ 1.73
CROCCP3-204ENST00000590118 ABCA10Q8WWZ4 1543 aa25.76■■□□□ 1.71
CROCCP3-204ENST00000590118 ABCA5Q8WWZ7 1642 aa25.74■■□□□ 1.71
CROCCP3-204ENST00000590118 ERCC6L2Q5T890 1561 aa25.71■■□□□ 1.71
CROCCP3-204ENST00000590118 GRIN2AQ12879 1464 aa25.67■■□□□ 1.7
CROCCP3-204ENST00000590118 CEP170Q5SW79 1584 aa25.63■■□□□ 1.69
CROCCP3-204ENST00000590118 NUP160Q12769 1436 aa25.63■■□□□ 1.69
CROCCP3-204ENST00000590118 ADAMTS12P58397 1594 aa25.58■■□□□ 1.69
CROCCP3-204ENST00000590118 SHROOM2Q13796 1616 aa25.55■■□□□ 1.68
CROCCP3-204ENST00000590118 WRNQ14191 1432 aaPredicted RBP eCLIP25.55■■□□□ 1.68
CROCCP3-204ENST00000590118 FHAD1B1AJZ9 1412 aa25.52■■□□□ 1.68
CROCCP3-204ENST00000590118 KIF13AQ9H1H9 1805 aa25.5■■□□□ 1.67
CROCCP3-204ENST00000590118 TOP2BQ02880 1626 aa25.42■■□□□ 1.66
CROCCP3-204ENST00000590118 BIVM-ERCC5R4GMW8 1640 aa25.42■■□□□ 1.66
CROCCP3-204ENST00000590118 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
CROCCP3-204ENST00000590118 PRG4Q92954 1404 aaPredicted RBP25.41■■□□□ 1.66
CROCCP3-204ENST00000590118 JPH4Q96JJ6 628 aa25.38■■□□□ 1.65
CROCCP3-204ENST00000590118 SUPT5HO00267 1087 aaKnown RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms