RNA–Protein interactions for RNA: ENST00000469487.1

LARP4B-206, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 2

Gene LARP4B, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-206ENST00000469487 NISCHQ9Y2I1 1504 aa29.69■■■□□ 2.34
LARP4B-206ENST00000469487 CCDC180Q9P1Z9 1646 aa26.22■■□□□ 1.79
LARP4B-206ENST00000469487 ABCC9O60706 1549 aa25.62■■□□□ 1.69
LARP4B-206ENST00000469487 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.57
LARP4B-206ENST00000469487 DCAF8L2P0C7V8 631 aa24.72■■□□□ 1.55
LARP4B-206ENST00000469487 DCAF1Q9Y4B6 1507 aa24.58■■□□□ 1.53
LARP4B-206ENST00000469487 NACADO15069 1562 aa24.56■■□□□ 1.52
LARP4B-206ENST00000469487 MYO15BQ96JP2 1530 aa24.52■■□□□ 1.52
LARP4B-206ENST00000469487 RB1CC1Q8TDY2 1594 aa24.5■■□□□ 1.51
LARP4B-206ENST00000469487 DNAJC5BQ9UF47 199 aa24.39■■□□□ 1.49
LARP4B-206ENST00000469487 SCRIBQ14160 1630 aa23.99■■□□□ 1.43
LARP4B-206ENST00000469487 UNC13AQ9UPW8 1703 aa23.87■■□□□ 1.41
LARP4B-206ENST00000469487 PABPN1Q86U42 306 aaKnown RBP eCLIP23.79■■□□□ 1.4
LARP4B-206ENST00000469487 SHROOM4Q9ULL8 1493 aa23.78■■□□□ 1.4
LARP4B-206ENST00000469487 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
LARP4B-206ENST00000469487 CC2D2AQ9P2K1 1620 aa23.15■■□□□ 1.3
LARP4B-206ENST00000469487 CECR2Q9BXF3 1484 aa23.13■■□□□ 1.29
LARP4B-206ENST00000469487 EIF4G1Q04637 1599 aaKnown RBP23.05■■□□□ 1.28
LARP4B-206ENST00000469487 BAZ1AQ9NRL2 1556 aaPredicted RBP23.02■■□□□ 1.28
LARP4B-206ENST00000469487 SMARCA4P51532 1647 aa22.96■■□□□ 1.27
LARP4B-206ENST00000469487 MROH2BQ7Z745 1585 aa22.88■■□□□ 1.25
LARP4B-206ENST00000469487 RSF1Q96T23 1441 aaPredicted RBP22.77■■□□□ 1.24
LARP4B-206ENST00000469487 SMARCA2P51531 1590 aa22.75■■□□□ 1.23
LARP4B-206ENST00000469487 ATAD2BQ9ULI0 1458 aa22.72■■□□□ 1.23
LARP4B-206ENST00000469487 PEG3Q9GZU2 1588 aa22.7■■□□□ 1.22
LARP4B-206ENST00000469487 DNAJC5Q9H3Z4 198 aa22.67■■□□□ 1.22
LARP4B-206ENST00000469487 WIZO95785 1651 aa22.66■■□□□ 1.22
LARP4B-206ENST00000469487 NCAPD3P42695 1498 aa22.63■■□□□ 1.21
LARP4B-206ENST00000469487 SUPT5HO00267 1087 aaKnown RBP22.61■■□□□ 1.21
LARP4B-206ENST00000469487 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
LARP4B-206ENST00000469487 HMGXB3Q12766 1538 aa22.58■■□□□ 1.21
LARP4B-206ENST00000469487 TOP2AP11388 1531 aaKnown RBP22.48■■□□□ 1.19
LARP4B-206ENST00000469487 CUX2O14529 1486 aa22.28■■□□□ 1.16
LARP4B-206ENST00000469487 CCDC88BA6NC98 1476 aa22.19■■□□□ 1.14
LARP4B-206ENST00000469487 ERCC6Q03468 1493 aa22.12■■□□□ 1.13
LARP4B-206ENST00000469487 CADPSQ9ULU8 1353 aa22.01■■□□□ 1.11
LARP4B-206ENST00000469487 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
LARP4B-206ENST00000469487 CFTRP13569 1480 aa21.96■■□□□ 1.11
LARP4B-206ENST00000469487 NESP48681 1621 aa21.95■■□□□ 1.1
LARP4B-206ENST00000469487 PDS5BQ9NTI5 1447 aa21.86■■□□□ 1.09
LARP4B-206ENST00000469487 PRDM2Q13029 1718 aa21.86■■□□□ 1.09
LARP4B-206ENST00000469487 THOC2Q8NI27 1593 aaKnown RBP21.79■■□□□ 1.08
LARP4B-206ENST00000469487 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.08
LARP4B-206ENST00000469487 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
LARP4B-206ENST00000469487 KIF21AQ7Z4S6 1674 aa21.71■■□□□ 1.07
LARP4B-206ENST00000469487 MRC2Q9UBG0 1479 aa21.59■■□□□ 1.05
LARP4B-206ENST00000469487 ABCC8Q09428 1581 aa21.52■■□□□ 1.04
LARP4B-206ENST00000469487 WRNQ14191 1432 aaPredicted RBP eCLIP21.51■■□□□ 1.03
LARP4B-206ENST00000469487 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
LARP4B-206ENST00000469487 DNMBPQ6XZF7 1577 aa21.49■■□□□ 1.03
LARP4B-206ENST00000469487 WDR62O43379 1518 aa21.48■■□□□ 1.03
LARP4B-206ENST00000469487 TOPBP1Q92547 1522 aa21.47■■□□□ 1.03
LARP4B-206ENST00000469487 CUX1P39880 1505 aa21.45■■□□□ 1.02
LARP4B-206ENST00000469487 TRIM41Q8WV44 630 aa21.42■■□□□ 1.02
LARP4B-206ENST00000469487 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
LARP4B-206ENST00000469487 TOP2BQ02880 1626 aa21.39■■□□□ 1.01
LARP4B-206ENST00000469487 BIVM-ERCC5R4GMW8 1640 aa21.38■■□□□ 1.01
LARP4B-206ENST00000469487 FGD5Q6ZNL6 1462 aa21.33■■□□□ 1.01
LARP4B-206ENST00000469487 POLA1P09884 1462 aaPredicted RBP21.31■■□□□ 1
LARP4B-206ENST00000469487 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
LARP4B-206ENST00000469487 SOGA1O94964 1423 aa21.26■□□□□ 0.99
LARP4B-206ENST00000469487 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
LARP4B-206ENST00000469487 RAD54L2Q9Y4B4 1467 aa21.2■□□□□ 0.98
LARP4B-206ENST00000469487 OSCARQ8IYS5 282 aa21.18■□□□□ 0.98
LARP4B-206ENST00000469487 TARBP1Q13395 1621 aaKnown RBP21.16■□□□□ 0.98
LARP4B-206ENST00000469487 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.98
LARP4B-206ENST00000469487 WDR97A6NE52 1622 aa21.1■□□□□ 0.97
LARP4B-206ENST00000469487 ZNF608Q9ULD9 1512 aaPredicted RBP21.06■□□□□ 0.96
LARP4B-206ENST00000469487 TDRD9Q8NDG6 1382 aaKnown RBP21.06■□□□□ 0.96
LARP4B-206ENST00000469487 KIF27Q86VH2 1401 aa21.05■□□□□ 0.96
LARP4B-206ENST00000469487 EIF4G3O43432 1585 aaKnown RBP21.03■□□□□ 0.96
LARP4B-206ENST00000469487 AQRO60306 1485 aaKnown RBP eCLIP21.02■□□□□ 0.96
LARP4B-206ENST00000469487 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
LARP4B-206ENST00000469487 ABCA5Q8WWZ7 1642 aa21■□□□□ 0.95
LARP4B-206ENST00000469487 GRIN2BQ13224 1484 aa20.96■□□□□ 0.95
LARP4B-206ENST00000469487 EEA1Q15075 1411 aa20.95■□□□□ 0.95
LARP4B-206ENST00000469487 PBRM1Q86U86 1689 aa20.93■□□□□ 0.94
LARP4B-206ENST00000469487 RIMBP3CA6NJZ7 1639 aa20.93■□□□□ 0.94
LARP4B-206ENST00000469487 RIMBP3BA6NNM3 1639 aa20.93■□□□□ 0.94
LARP4B-206ENST00000469487 RIMBP3Q9UFD9 1639 aa20.93■□□□□ 0.94
LARP4B-206ENST00000469487 ERICH3Q5RHP9 1530 aa20.91■□□□□ 0.94
LARP4B-206ENST00000469487 RUSC2Q8N2Y8 1516 aa20.91■□□□□ 0.94
LARP4B-206ENST00000469487 FAM9AQ8IZU1 332 aaPredicted RBP20.88■□□□□ 0.93
LARP4B-206ENST00000469487 SNAPC4Q5SXM2 1469 aa20.87■□□□□ 0.93
LARP4B-206ENST00000469487 MAGI1Q96QZ7 1491 aaPredicted RBP20.86■□□□□ 0.93
LARP4B-206ENST00000469487 IGF1RP08069 1367 aa20.85■□□□□ 0.93
LARP4B-206ENST00000469487 ARHGEF11O15085 1522 aa20.83■□□□□ 0.93
LARP4B-206ENST00000469487 CSRNP3Q8WYN3 585 aa20.83■□□□□ 0.93
LARP4B-206ENST00000469487 CUL7Q14999 1698 aa20.82■□□□□ 0.92
LARP4B-206ENST00000469487 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
LARP4B-206ENST00000469487 FHAD1B1AJZ9 1412 aa20.79■□□□□ 0.92
LARP4B-206ENST00000469487 CARMIL1Q5VZK9 1371 aa20.79■□□□□ 0.92
LARP4B-206ENST00000469487 FBLN2P98095 1184 aa20.76■□□□□ 0.91
LARP4B-206ENST00000469487 CHMP7Q8WUX9 453 aaPredicted RBP20.76■□□□□ 0.91
LARP4B-206ENST00000469487 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
LARP4B-206ENST00000469487 RAPGEF2Q9Y4G8 1499 aa20.71■□□□□ 0.91
LARP4B-206ENST00000469487 PRXQ9BXM0 1461 aa20.69■□□□□ 0.9
LARP4B-206ENST00000469487 CHD1O14646 1710 aa20.68■□□□□ 0.9
LARP4B-206ENST00000469487 CYB5RLQ6IPT4 315 aa20.68■□□□□ 0.9
LARP4B-206ENST00000469487 GRIN2AQ12879 1464 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms