RNA–Protein interactions for RNA: ENST00000588195.5

PCSK4-207, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 2

Gene PCSK4, Length 1,806 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-207ENST00000588195 NISCHQ9Y2I1 1504 aa45.34■■■■■ 4.85
PCSK4-207ENST00000588195 CCDC180Q9P1Z9 1646 aa39.34■■■■□ 3.89
PCSK4-207ENST00000588195 ZCCHC6Q5VYS8 1495 aaKnown RBP38.22■■■■□ 3.71
PCSK4-207ENST00000588195 DCAF1Q9Y4B6 1507 aa37.47■■■■□ 3.59
PCSK4-207ENST00000588195 SHROOM4Q9ULL8 1493 aa37.38■■■■□ 3.57
PCSK4-207ENST00000588195 DCAF8L2P0C7V8 631 aa37.2■■■■□ 3.55
PCSK4-207ENST00000588195 MYO15BQ96JP2 1530 aa36.8■■■■□ 3.48
PCSK4-207ENST00000588195 ABCC9O60706 1549 aa36.7■■■■□ 3.47
PCSK4-207ENST00000588195 NACADO15069 1562 aa36.46■■■■□ 3.43
PCSK4-207ENST00000588195 SCRIBQ14160 1630 aa36.28■■■■□ 3.4
PCSK4-207ENST00000588195 SUPT5HO00267 1087 aaKnown RBP36.18■■■■□ 3.38
PCSK4-207ENST00000588195 RB1CC1Q8TDY2 1594 aa36.03■■■■□ 3.36
PCSK4-207ENST00000588195 UNC13AQ9UPW8 1703 aa35.51■■■■□ 3.28
PCSK4-207ENST00000588195 RSF1Q96T23 1441 aaPredicted RBP35.37■■■■□ 3.25
PCSK4-207ENST00000588195 CECR2Q9BXF3 1484 aa35.22■■■■□ 3.23
PCSK4-207ENST00000588195 MROH2BQ7Z745 1585 aa35.09■■■■□ 3.21
PCSK4-207ENST00000588195 BICRAQ9NZM4 1560 aa35■■■■□ 3.19
PCSK4-207ENST00000588195 BAZ1AQ9NRL2 1556 aaPredicted RBP34.97■■■■□ 3.19
PCSK4-207ENST00000588195 CHIC1Q5VXU3 224 aa34.91■■■■□ 3.18
PCSK4-207ENST00000588195 WIZO95785 1651 aa34.88■■■■□ 3.17
PCSK4-207ENST00000588195 SMARCA4P51532 1647 aa34.79■■■■□ 3.16
PCSK4-207ENST00000588195 PABPN1Q86U42 306 aaKnown RBP eCLIP34.68■■■■□ 3.14
PCSK4-207ENST00000588195 TOP2AP11388 1531 aaKnown RBP34.47■■■■□ 3.11
PCSK4-207ENST00000588195 PEG3Q9GZU2 1588 aa34.32■■■■□ 3.08
PCSK4-207ENST00000588195 SMARCA2P51531 1590 aa34.19■■■■□ 3.06
PCSK4-207ENST00000588195 EIF4G1Q04637 1599 aaKnown RBP34.18■■■■□ 3.06
PCSK4-207ENST00000588195 CCDC88BA6NC98 1476 aa34.11■■■■□ 3.05
PCSK4-207ENST00000588195 ATAD2BQ9ULI0 1458 aa34.04■■■■□ 3.04
PCSK4-207ENST00000588195 TRIM41Q8WV44 630 aa33.94■■■■□ 3.02
PCSK4-207ENST00000588195 BAZ1BQ9UIG0 1483 aaKnown RBP33.87■■■■□ 3.01
PCSK4-207ENST00000588195 HMGXB3Q12766 1538 aa33.67■■■□□ 2.98
PCSK4-207ENST00000588195 ABCC8Q09428 1581 aa33.63■■■□□ 2.97
PCSK4-207ENST00000588195 NCAPD3P42695 1498 aa33.62■■■□□ 2.97
PCSK4-207ENST00000588195 LOC105371045A0A1W2PR82 267 aa33.61■■■□□ 2.97
PCSK4-207ENST00000588195 FAM9AQ8IZU1 332 aaPredicted RBP33.37■■■□□ 2.93
PCSK4-207ENST00000588195 WRNQ14191 1432 aaPredicted RBP eCLIP33.27■■■□□ 2.92
PCSK4-207ENST00000588195 CC2D2AQ9P2K1 1620 aa33.26■■■□□ 2.92
PCSK4-207ENST00000588195 SYNJ1O43426 1573 aa33.19■■■□□ 2.9
PCSK4-207ENST00000588195 PRDM2Q13029 1718 aa33.06■■■□□ 2.88
PCSK4-207ENST00000588195 SOGA1O94964 1423 aa33.05■■■□□ 2.88
PCSK4-207ENST00000588195 CFTRP13569 1480 aa33.04■■■□□ 2.88
PCSK4-207ENST00000588195 EEA1Q15075 1411 aa33.04■■■□□ 2.88
PCSK4-207ENST00000588195 TOP2BQ02880 1626 aa32.99■■■□□ 2.87
PCSK4-207ENST00000588195 BIVM-ERCC5R4GMW8 1640 aa32.98■■■□□ 2.87
PCSK4-207ENST00000588195 RUSC2Q8N2Y8 1516 aa32.93■■■□□ 2.86
PCSK4-207ENST00000588195 EHMT2Q96KQ7 1210 aa32.91■■■□□ 2.86
PCSK4-207ENST00000588195 CSRNP3Q8WYN3 585 aa32.79■■■□□ 2.84
PCSK4-207ENST00000588195 CADPSQ9ULU8 1353 aa32.79■■■□□ 2.84
PCSK4-207ENST00000588195 CUX1P39880 1505 aa32.77■■■□□ 2.84
PCSK4-207ENST00000588195 KIF21BO75037 1637 aa32.67■■■□□ 2.82
PCSK4-207ENST00000588195 GOLGA3Q08378 1498 aa32.65■■■□□ 2.82
PCSK4-207ENST00000588195 TNIKQ9UKE5 1360 aa32.62■■■□□ 2.81
PCSK4-207ENST00000588195 PCGF6Q9BYE7 350 aa32.61■■■□□ 2.81
PCSK4-207ENST00000588195 CEP164Q9UPV0 1460 aa32.58■■■□□ 2.81
PCSK4-207ENST00000588195 CEP162Q5TB80 1403 aa32.52■■■□□ 2.8
PCSK4-207ENST00000588195 FANCD2Q9BXW9 1451 aa32.47■■■□□ 2.79
PCSK4-207ENST00000588195 TRIM26Q12899 539 aaPredicted RBP32.45■■■□□ 2.79
PCSK4-207ENST00000588195 LAMC3Q9Y6N6 1575 aa32.43■■■□□ 2.78
PCSK4-207ENST00000588195 NESP48681 1621 aa32.42■■■□□ 2.78
PCSK4-207ENST00000588195 UBTFP17480 764 aaKnown RBP32.42■■■□□ 2.78
PCSK4-207ENST00000588195 RAPGEF2Q9Y4G8 1499 aa32.36■■■□□ 2.77
PCSK4-207ENST00000588195 KIF27Q86VH2 1401 aa32.35■■■□□ 2.77
PCSK4-207ENST00000588195 ERICH3Q5RHP9 1530 aa32.32■■■□□ 2.77
PCSK4-207ENST00000588195 FGD5Q6ZNL6 1462 aa32.31■■■□□ 2.76
PCSK4-207ENST00000588195 DNMBPQ6XZF7 1577 aa32.3■■■□□ 2.76
PCSK4-207ENST00000588195 PRXQ9BXM0 1461 aa32.3■■■□□ 2.76
PCSK4-207ENST00000588195 DNAJC5BQ9UF47 199 aa32.23■■■□□ 2.75
PCSK4-207ENST00000588195 TOPBP1Q92547 1522 aa32.2■■■□□ 2.75
PCSK4-207ENST00000588195 CUX2O14529 1486 aa32.19■■■□□ 2.74
PCSK4-207ENST00000588195 CLIP1P30622 1438 aa32.12■■■□□ 2.73
PCSK4-207ENST00000588195 HRCP23327 699 aa32.11■■■□□ 2.73
PCSK4-207ENST00000588195 KIF21AQ7Z4S6 1674 aa32.1■■■□□ 2.73
PCSK4-207ENST00000588195 PDS5BQ9NTI5 1447 aa32.1■■■□□ 2.73
PCSK4-207ENST00000588195 POLA1P09884 1462 aaPredicted RBP32.08■■■□□ 2.73
PCSK4-207ENST00000588195 URB2Q14146 1524 aaKnown RBP32.07■■■□□ 2.72
PCSK4-207ENST00000588195 ABCA10Q8WWZ4 1543 aa32.03■■■□□ 2.72
PCSK4-207ENST00000588195 IGF1RP08069 1367 aa32.02■■■□□ 2.72
PCSK4-207ENST00000588195 PPARGC1BQ86YN6 1023 aaKnown RBP32■■■□□ 2.71
PCSK4-207ENST00000588195 RAD54L2Q9Y4B4 1467 aa31.99■■■□□ 2.71
PCSK4-207ENST00000588195 WDR97A6NE52 1622 aa31.98■■■□□ 2.71
PCSK4-207ENST00000588195 VPS8Q8N3P4 1428 aa31.93■■■□□ 2.7
PCSK4-207ENST00000588195 CARMIL1Q5VZK9 1371 aa31.86■■■□□ 2.69
PCSK4-207ENST00000588195 ARAP1Q96P48 1450 aa31.8■■■□□ 2.68
PCSK4-207ENST00000588195 CUL7Q14999 1698 aa31.8■■■□□ 2.68
PCSK4-207ENST00000588195 ABCA5Q8WWZ7 1642 aa31.78■■■□□ 2.68
PCSK4-207ENST00000588195 RANGAP1P46060 587 aaPredicted RBP31.77■■■□□ 2.68
PCSK4-207ENST00000588195 TARBP1Q13395 1621 aaKnown RBP31.72■■■□□ 2.67
PCSK4-207ENST00000588195 MRC2Q9UBG0 1479 aa31.71■■■□□ 2.67
PCSK4-207ENST00000588195 ARHGAP35Q9NRY4 1499 aa31.68■■■□□ 2.66
PCSK4-207ENST00000588195 TTBK1Q5TCY1 1321 aaPredicted RBP31.65■■■□□ 2.66
PCSK4-207ENST00000588195 GAPVD1Q14C86 1478 aa31.61■■■□□ 2.65
PCSK4-207ENST00000588195 CTTNBP2Q8WZ74 1663 aa31.59■■■□□ 2.65
PCSK4-207ENST00000588195 TDRD9Q8NDG6 1382 aaKnown RBP31.59■■■□□ 2.65
PCSK4-207ENST00000588195 WDR62O43379 1518 aa31.55■■■□□ 2.64
PCSK4-207ENST00000588195 APLP2Q06481 763 aa31.53■■■□□ 2.64
PCSK4-207ENST00000588195 PBRM1Q86U86 1689 aa31.52■■■□□ 2.64
PCSK4-207ENST00000588195 EFCAB5A4FU69 1503 aa31.4■■■□□ 2.62
PCSK4-207ENST00000588195 ZEB1P37275 1124 aaPredicted RBP31.39■■■□□ 2.62
PCSK4-207ENST00000588195 THOC2Q8NI27 1593 aaKnown RBP31.39■■■□□ 2.62
PCSK4-207ENST00000588195 IFT140Q96RY7 1462 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms