RNA–Protein interactions for RNA: ENST00000608970.1

LARP4B-209, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 2

Gene LARP4B, Length 656 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-209ENST00000608970 AEBP2Q6ZN18 517 aaPredicted RBP40.49■■■■■ 4.07
LARP4B-209ENST00000608970 CHIC1Q5VXU3 224 aa38.91■■■■□ 3.82
LARP4B-209ENST00000608970 SENP3Q9H4L4 574 aaPredicted RBP34.61■■■■□ 3.13
LARP4B-209ENST00000608970 PHF23Q9BUL5 403 aaPredicted RBP34.16■■■■□ 3.06
LARP4B-209ENST00000608970 FOXD1Q16676 465 aa32.12■■■□□ 2.73
LARP4B-209ENST00000608970 PLPPR3Q6T4P5 718 aa31.33■■■□□ 2.61
LARP4B-209ENST00000608970 PPP6R1Q9UPN7 881 aa30.3■■■□□ 2.44
LARP4B-209ENST00000608970 ADRA2BP18089 450 aa30.26■■■□□ 2.43
LARP4B-209ENST00000608970 PIAS4Q8N2W9 510 aaPredicted RBP30.18■■■□□ 2.42
LARP4B-209ENST00000608970 MSH5O43196 834 aa30■■■□□ 2.39
LARP4B-209ENST00000608970 POTEDQ86YR6 584 aa28.52■■■□□ 2.16
LARP4B-209ENST00000608970 SCAF1Q9H7N4 1312 aaKnown RBP27.82■■■□□ 2.04
LARP4B-209ENST00000608970 NISCHQ9Y2I1 1504 aa27.79■■■□□ 2.04
LARP4B-209ENST00000608970 MAPK8IP2Q13387 824 aaPredicted RBP27.65■■■□□ 2.02
LARP4B-209ENST00000608970 PPP4R3CPQ6ZMV5 832 aa27.47■■□□□ 1.99
LARP4B-209ENST00000608970 DMRT2Q9Y5R5 561 aa27.46■■□□□ 1.99
LARP4B-209ENST00000608970 CNKSR2Q8WXI2 1034 aa26.89■■□□□ 1.9
LARP4B-209ENST00000608970 NCBP3Q53F19 620 aaKnown RBP26.62■■□□□ 1.85
LARP4B-209ENST00000608970 HOXD11P31277 338 aaPredicted RBP26.6■■□□□ 1.85
LARP4B-209ENST00000608970 RNF216Q9NWF9 866 aaPredicted RBP26.54■■□□□ 1.84
LARP4B-209ENST00000608970 DCAF8L1A6NGE4 600 aa26.38■■□□□ 1.81
LARP4B-209ENST00000608970 NPM3O75607 178 aaKnown RBP26.13■■□□□ 1.77
LARP4B-209ENST00000608970 KCNA4P22459 653 aa25.98■■□□□ 1.75
LARP4B-209ENST00000608970 DNAJC5BQ9UF47 199 aa25.65■■□□□ 1.7
LARP4B-209ENST00000608970 RNF39Q9H2S5 420 aa25.58■■□□□ 1.69
LARP4B-209ENST00000608970 CACNB1Q02641 598 aaPredicted RBP25.49■■□□□ 1.67
LARP4B-209ENST00000608970 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.41■■□□□ 1.669e-8■□□□□ 8.3
LARP4B-209ENST00000608970 C1QBPQ07021 282 aaKnown RBP25.28■■□□□ 1.64
LARP4B-209ENST00000608970 U3KPZ7 1027 aaPredicted RBP24.85■■□□□ 1.57
LARP4B-209ENST00000608970 SLC4A2P04920 1241 aa24.82■■□□□ 1.56
LARP4B-209ENST00000608970 CCDC180Q9P1Z9 1646 aa24.66■■□□□ 1.54
LARP4B-209ENST00000608970 SLC4A1APQ9BWU0 796 aaKnown RBP24.66■■□□□ 1.54
LARP4B-209ENST00000608970 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.41■■□□□ 1.5
LARP4B-209ENST00000608970 HNRNPUL2Q1KMD3 747 aaKnown RBP24.41■■□□□ 1.5
LARP4B-209ENST00000608970 CAPN15O75808 1086 aa24.37■■□□□ 1.49
LARP4B-209ENST00000608970 SPINK5Q9NQ38 1064 aaPredicted RBP24.36■■□□□ 1.49
LARP4B-209ENST00000608970 APLP2Q06481 763 aa24.35■■□□□ 1.49
LARP4B-209ENST00000608970 ABCC9O60706 1549 aa24.27■■□□□ 1.48
LARP4B-209ENST00000608970 SAMD1Q6SPF0 538 aaPredicted RBP24.26■■□□□ 1.47
LARP4B-209ENST00000608970 MYCNP04198 464 aaPredicted RBP24.23■■□□□ 1.47
LARP4B-209ENST00000608970 FOXD4L1Q9NU39 408 aa24.18■■□□□ 1.46
LARP4B-209ENST00000608970 DSG3P32926 999 aa24.08■■□□□ 1.45
LARP4B-209ENST00000608970 ZNF219Q9P2Y4 722 aaPredicted RBP24.08■■□□□ 1.45
LARP4B-209ENST00000608970 TRHP20396 242 aaPredicted RBP24.07■■□□□ 1.44
LARP4B-209ENST00000608970 ZBTB22O15209 634 aa23.84■■□□□ 1.41
LARP4B-209ENST00000608970 ABCB7O75027 752 aa23.8■■□□□ 1.4
LARP4B-209ENST00000608970 DCAF8L2P0C7V8 631 aa23.57■■□□□ 1.36
LARP4B-209ENST00000608970 ATF5Q9Y2D1 282 aaPredicted RBP23.52■■□□□ 1.36
LARP4B-209ENST00000608970 POLA2Q14181 598 aa23.49■■□□□ 1.35
LARP4B-209ENST00000608970 ATXN8OSP0DMR3 200 aa23.41■■□□□ 1.34
LARP4B-209ENST00000608970 RB1CC1Q8TDY2 1594 aa23.35■■□□□ 1.33
LARP4B-209ENST00000608970 NACADO15069 1562 aa23.29■■□□□ 1.32
LARP4B-209ENST00000608970 CSRNP3Q8WYN3 585 aa23.14■■□□□ 1.29
LARP4B-209ENST00000608970 ZBTB12Q9Y330 459 aaPredicted RBP23.13■■□□□ 1.29
LARP4B-209ENST00000608970 EHMT2Q96KQ7 1210 aa23.1■■□□□ 1.29
LARP4B-209ENST00000608970 MYO15BQ96JP2 1530 aa23.09■■□□□ 1.29
LARP4B-209ENST00000608970 ZCCHC6Q5VYS8 1495 aaKnown RBP23.09■■□□□ 1.29
LARP4B-209ENST00000608970 RBM42Q9BTD8 480 aaKnown RBP23.07■■□□□ 1.28
LARP4B-209ENST00000608970 DCAF1Q9Y4B6 1507 aa22.98■■□□□ 1.27
LARP4B-209ENST00000608970 PABPN1Q86U42 306 aaKnown RBP eCLIP22.75■■□□□ 1.23
LARP4B-209ENST00000608970 FBLN2P98095 1184 aa22.73■■□□□ 1.23
LARP4B-209ENST00000608970 OSCARQ8IYS5 282 aa22.73■■□□□ 1.23
LARP4B-209ENST00000608970 AKT1S1Q96B36 256 aa22.58■■□□□ 1.21
LARP4B-209ENST00000608970 UNC13AQ9UPW8 1703 aa22.56■■□□□ 1.2
LARP4B-209ENST00000608970 SCRIBQ14160 1630 aa22.54■■□□□ 1.2
LARP4B-209ENST00000608970 MKRN4PQ13434 485 aaPredicted RBP22.47■■□□□ 1.19
LARP4B-209ENST00000608970 POTEHQ6S545 545 aa22.46■■□□□ 1.19
LARP4B-209ENST00000608970 BICRAQ9NZM4 1560 aa22.45■■□□□ 1.18
LARP4B-209ENST00000608970 SPDYE2BA6NHP3 402 aa22.41■■□□□ 1.18
LARP4B-209ENST00000608970 SPDYE6P0CI01 402 aa22.41■■□□□ 1.18
LARP4B-209ENST00000608970 SPDYE2Q495Y8 402 aa22.41■■□□□ 1.18
LARP4B-209ENST00000608970 SHROOM4Q9ULL8 1493 aa22.37■■□□□ 1.17
LARP4B-209ENST00000608970 CHRDL2Q6WN34 429 aa22.34■■□□□ 1.17
LARP4B-209ENST00000608970 REM2Q8IYK8 340 aaPredicted RBP22.33■■□□□ 1.17
LARP4B-209ENST00000608970 ZNF692Q9BU19 519 aaPredicted RBP22.2■■□□□ 1.14
LARP4B-209ENST00000608970 SSUH2Q9Y2M2 353 aa22.11■■□□□ 1.13
LARP4B-209ENST00000608970 PITPNM1O00562 1244 aa22.08■■□□□ 1.13
LARP4B-209ENST00000608970 EIF4G1Q04637 1599 aaKnown RBP21.96■■□□□ 1.11
LARP4B-209ENST00000608970 SPDYE1Q8NFV5 336 aaPredicted RBP21.94■■□□□ 1.1
LARP4B-209ENST00000608970 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
LARP4B-209ENST00000608970 PIP4P2Q8N4L2 257 aa21.86■■□□□ 1.09
LARP4B-209ENST00000608970 CLEC11AQ9Y240 323 aa21.86■■□□□ 1.09
LARP4B-209ENST00000608970 CECR2Q9BXF3 1484 aa21.83■■□□□ 1.09
LARP4B-209ENST00000608970 FXR2P51116 673 aaKnown RBP eCLIP21.8■■□□□ 1.082e-6■■■■□ 24.4
LARP4B-209ENST00000608970 SPDYE4A6NLX3 237 aa21.7■■□□□ 1.06
LARP4B-209ENST00000608970 BAZ1AQ9NRL2 1556 aaPredicted RBP21.59■■□□□ 1.05
LARP4B-209ENST00000608970 PRR29P0C7W0 189 aa21.57■■□□□ 1.04
LARP4B-209ENST00000608970 PRKAR2AP13861 404 aaKnown RBP21.54■■□□□ 1.04
LARP4B-209ENST00000608970 SMARCA4P51532 1647 aa21.53■■□□□ 1.04
LARP4B-209ENST00000608970 SMARCA2P51531 1590 aa21.49■■□□□ 1.03
LARP4B-209ENST00000608970 NCAPD3P42695 1498 aa21.49■■□□□ 1.03
LARP4B-209ENST00000608970 ATAD2BQ9ULI0 1458 aa21.47■■□□□ 1.03
LARP4B-209ENST00000608970 HAX1O00165 279 aa21.42■■□□□ 1.02
LARP4B-209ENST00000608970 STAG3Q9UJ98 1225 aa21.42■■□□□ 1.02
LARP4B-209ENST00000608970 MROH2BQ7Z745 1585 aa21.37■■□□□ 1.01
LARP4B-209ENST00000608970 BAZ1BQ9UIG0 1483 aaKnown RBP21.37■■□□□ 1.01
LARP4B-209ENST00000608970 CHADLQ6NUI6 762 aa21.35■■□□□ 1.01
LARP4B-209ENST00000608970 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
LARP4B-209ENST00000608970 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
LARP4B-209ENST00000608970 SP7Q8TDD2 431 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms