RNA–Protein interactions for RNA: ENST00000586616.5

PCSK4-205, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 2

Gene PCSK4, Length 2,855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-205ENST00000586616 NISCHQ9Y2I1 1504 aa40.09■■■■■ 4.01
PCSK4-205ENST00000586616 HRCP23327 699 aa35.8■■■■□ 3.32
PCSK4-205ENST00000586616 SHROOM4Q9ULL8 1493 aa35.6■■■■□ 3.29
PCSK4-205ENST00000586616 SUPT5HO00267 1087 aaKnown RBP35.47■■■■□ 3.27
PCSK4-205ENST00000586616 PCGF6Q9BYE7 350 aa35.16■■■■□ 3.22
PCSK4-205ENST00000586616 PPARGC1BQ86YN6 1023 aaKnown RBP35.11■■■■□ 3.21
PCSK4-205ENST00000586616 MYO15BQ96JP2 1530 aa35.01■■■■□ 3.19
PCSK4-205ENST00000586616 CHIC1Q5VXU3 224 aa34.83■■■■□ 3.17
PCSK4-205ENST00000586616 PELP1Q8IZL8 1130 aaKnown RBP34.43■■■■□ 3.1
PCSK4-205ENST00000586616 DCAF1Q9Y4B6 1507 aa34.24■■■■□ 3.07
PCSK4-205ENST00000586616 ZCCHC6Q5VYS8 1495 aaKnown RBP34.09■■■■□ 3.05
PCSK4-205ENST00000586616 LOC105371045A0A1W2PR82 267 aa34.06■■■■□ 3.04
PCSK4-205ENST00000586616 TRIM26Q12899 539 aaPredicted RBP34.01■■■■□ 3.03
PCSK4-205ENST00000586616 SCAF1Q9H7N4 1312 aaKnown RBP33.85■■■■□ 3.01
PCSK4-205ENST00000586616 CCDC180Q9P1Z9 1646 aa33.8■■■■□ 3
PCSK4-205ENST00000586616 ZEB1P37275 1124 aaPredicted RBP33.7■■■□□ 2.99
PCSK4-205ENST00000586616 DCAF8L2P0C7V8 631 aa33.57■■■□□ 2.96
PCSK4-205ENST00000586616 MYT1Q01538 1121 aa33.05■■■□□ 2.88
PCSK4-205ENST00000586616 ACIN1Q9UKV3 1341 aaKnown RBP33.04■■■□□ 2.88
PCSK4-205ENST00000586616 NEUROD1Q13562 356 aa32.96■■■□□ 2.87
PCSK4-205ENST00000586616 FAM9AQ8IZU1 332 aaPredicted RBP32.82■■■□□ 2.84
PCSK4-205ENST00000586616 GTF3C3Q9Y5Q9 886 aa32.8■■■□□ 2.84
PCSK4-205ENST00000586616 TRIM41Q8WV44 630 aa32.79■■■□□ 2.84
PCSK4-205ENST00000586616 EHMT2Q96KQ7 1210 aa32.72■■■□□ 2.83
PCSK4-205ENST00000586616 CENPBP07199 599 aaPredicted RBP32.67■■■□□ 2.82
PCSK4-205ENST00000586616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.61■■■□□ 2.81
PCSK4-205ENST00000586616 CCER1Q8TC90 406 aaPredicted RBP32.56■■■□□ 2.8
PCSK4-205ENST00000586616 DIEXFQ68CQ4 756 aaKnown RBP32.54■■■□□ 2.8
PCSK4-205ENST00000586616 ABCC9O60706 1549 aa32.39■■■□□ 2.78
PCSK4-205ENST00000586616 RSF1Q96T23 1441 aaPredicted RBP32.29■■■□□ 2.76
PCSK4-205ENST00000586616 RB1CC1Q8TDY2 1594 aa32.16■■■□□ 2.74
PCSK4-205ENST00000586616 YTHDC1Q96MU7 727 aaKnown RBP32.06■■■□□ 2.72
PCSK4-205ENST00000586616 TTBK1Q5TCY1 1321 aaPredicted RBP31.94■■■□□ 2.7
PCSK4-205ENST00000586616 ZNF316A6NFI3 1004 aaPredicted RBP31.91■■■□□ 2.7
PCSK4-205ENST00000586616 SCRIBQ14160 1630 aa31.81■■■□□ 2.68
PCSK4-205ENST00000586616 MIER1Q8N108 512 aa31.71■■■□□ 2.67
PCSK4-205ENST00000586616 WRNQ14191 1432 aaPredicted RBP eCLIP31.53■■■□□ 2.64
PCSK4-205ENST00000586616 CEP162Q5TB80 1403 aa31.41■■■□□ 2.62
PCSK4-205ENST00000586616 CECR2Q9BXF3 1484 aa31.4■■■□□ 2.62
PCSK4-205ENST00000586616 MROH2BQ7Z745 1585 aa31.34■■■□□ 2.61
PCSK4-205ENST00000586616 WIZO95785 1651 aa31.25■■■□□ 2.59
PCSK4-205ENST00000586616 HNRNPUL2Q1KMD3 747 aaKnown RBP31.23■■■□□ 2.59
PCSK4-205ENST00000586616 SUPT16HQ9Y5B9 1047 aaKnown RBP31.21■■■□□ 2.59
PCSK4-205ENST00000586616 TNIKQ9UKE5 1360 aa31.18■■■□□ 2.58
PCSK4-205ENST00000586616 UBTFP17480 764 aaKnown RBP31.14■■■□□ 2.58
PCSK4-205ENST00000586616 CCDC88BA6NC98 1476 aa31.14■■■□□ 2.58
PCSK4-205ENST00000586616 EIF4G1Q04637 1599 aaKnown RBP31.12■■■□□ 2.57
PCSK4-205ENST00000586616 CLSPNQ9HAW4 1339 aa31.11■■■□□ 2.57
PCSK4-205ENST00000586616 ANP32EQ9BTT0 268 aa31.1■■■□□ 2.57
PCSK4-205ENST00000586616 ABCC8Q09428 1581 aa31.08■■■□□ 2.57
PCSK4-205ENST00000586616 TSHZ2Q9NRE2 1034 aa31.06■■■□□ 2.56
PCSK4-205ENST00000586616 SOGA1O94964 1423 aa31.05■■■□□ 2.56
PCSK4-205ENST00000586616 BCL11AQ9H165 835 aa30.99■■■□□ 2.55
PCSK4-205ENST00000586616 BAZ1AQ9NRL2 1556 aaPredicted RBP30.98■■■□□ 2.55
PCSK4-205ENST00000586616 CSRNP3Q8WYN3 585 aa30.97■■■□□ 2.55
PCSK4-205ENST00000586616 RUSC2Q8N2Y8 1516 aa30.86■■■□□ 2.53
PCSK4-205ENST00000586616 EEA1Q15075 1411 aa30.8■■■□□ 2.52
PCSK4-205ENST00000586616 GOLGA3Q08378 1498 aa30.79■■■□□ 2.52
PCSK4-205ENST00000586616 NACADO15069 1562 aa30.68■■■□□ 2.5
PCSK4-205ENST00000586616 APLP2Q06481 763 aa30.67■■■□□ 2.5
PCSK4-205ENST00000586616 BCANQ96GW7 911 aa30.63■■■□□ 2.49
PCSK4-205ENST00000586616 TOP2AP11388 1531 aaKnown RBP30.61■■■□□ 2.49
PCSK4-205ENST00000586616 CLIP1P30622 1438 aa30.58■■■□□ 2.49
PCSK4-205ENST00000586616 SMARCA2P51531 1590 aa30.54■■■□□ 2.48
PCSK4-205ENST00000586616 DHX57Q6P158 1386 aaKnown RBP30.53■■■□□ 2.48
PCSK4-205ENST00000586616 VPS8Q8N3P4 1428 aa30.53■■■□□ 2.48
PCSK4-205ENST00000586616 KCNH8Q96L42 1107 aa30.48■■■□□ 2.47
PCSK4-205ENST00000586616 RANGAP1P46060 587 aaPredicted RBP30.47■■■□□ 2.47
PCSK4-205ENST00000586616 CEP164Q9UPV0 1460 aa30.46■■■□□ 2.47
PCSK4-205ENST00000586616 FKBP8Q14318 412 aa30.44■■■□□ 2.46
PCSK4-205ENST00000586616 RBM19Q9Y4C8 960 aaKnown RBP30.35■■■□□ 2.45
PCSK4-205ENST00000586616 KIF21BO75037 1637 aa30.32■■■□□ 2.44
PCSK4-205ENST00000586616 SMARCA4P51532 1647 aa30.27■■■□□ 2.44
PCSK4-205ENST00000586616 NEFLP07196 543 aa30.21■■■□□ 2.43
PCSK4-205ENST00000586616 RAPGEF2Q9Y4G8 1499 aa30.19■■■□□ 2.42
PCSK4-205ENST00000586616 BAZ1BQ9UIG0 1483 aaKnown RBP30.17■■■□□ 2.42
PCSK4-205ENST00000586616 ITGAEP38570 1179 aa30.16■■■□□ 2.42
PCSK4-205ENST00000586616 SYNJ1O43426 1573 aa30.1■■■□□ 2.41
PCSK4-205ENST00000586616 KANK4Q5T7N3 995 aaPredicted RBP30.09■■■□□ 2.41
PCSK4-205ENST00000586616 DDX10Q13206 875 aaKnown RBP30.08■■■□□ 2.41
PCSK4-205ENST00000586616 MSH5O43196 834 aa30.05■■■□□ 2.4
PCSK4-205ENST00000586616 TRIM52Q96A61 297 aa30■■■□□ 2.39
PCSK4-205ENST00000586616 RRBP1Q9P2E9 1410 aaKnown RBP29.94■■■□□ 2.38
PCSK4-205ENST00000586616 CUX2O14529 1486 aa29.89■■■□□ 2.38
PCSK4-205ENST00000586616 ERICH6Q7L0X2 663 aa29.88■■■□□ 2.37
PCSK4-205ENST00000586616 ARAP1Q96P48 1450 aa29.87■■■□□ 2.37
PCSK4-205ENST00000586616 CCNB3Q8WWL7 1395 aa29.87■■■□□ 2.37
PCSK4-205ENST00000586616 PPP1R15AO75807 674 aaPredicted RBP29.82■■■□□ 2.36
PCSK4-205ENST00000586616 RAB3GAP2Q9H2M9 1393 aa29.81■■■□□ 2.36
PCSK4-205ENST00000586616 MAPKBP1O60336 1514 aa29.79■■■□□ 2.36
PCSK4-205ENST00000586616 FANCIQ9NVI1 1328 aa29.79■■■□□ 2.36
PCSK4-205ENST00000586616 HIRIP3Q9BW71 556 aaPredicted RBP29.78■■■□□ 2.36
PCSK4-205ENST00000586616 ANP32CO43423 234 aa29.78■■■□□ 2.36
PCSK4-205ENST00000586616 CCER2I3L3R5 266 aa29.78■■■□□ 2.36
PCSK4-205ENST00000586616 WDR97A6NE52 1622 aa29.76■■■□□ 2.35
PCSK4-205ENST00000586616 SIN3AQ96ST3 1273 aa29.75■■■□□ 2.35
PCSK4-205ENST00000586616 CDK11AQ9UQ88 783 aaPredicted RBP29.73■■■□□ 2.35
PCSK4-205ENST00000586616 IRX6P78412 446 aaPredicted RBP29.66■■■□□ 2.34
PCSK4-205ENST00000586616 ERICH3Q5RHP9 1530 aa29.61■■■□□ 2.33
PCSK4-205ENST00000586616 PRXQ9BXM0 1461 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms