RNA–Protein interactions for RNA: ENST00000440827.3

PXN-205, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-205ENST00000440827 NISCHQ9Y2I1 1504 aa39.3■■■■□ 3.88
PXN-205ENST00000440827 CCDC180Q9P1Z9 1646 aa34.97■■■■□ 3.19
PXN-205ENST00000440827 ABCC9O60706 1549 aa34.7■■■■□ 3.14
PXN-205ENST00000440827 DCAF8L2P0C7V8 631 aa33.25■■■□□ 2.91
PXN-205ENST00000440827 RB1CC1Q8TDY2 1594 aa33.14■■■□□ 2.9
PXN-205ENST00000440827 NACADO15069 1562 aa33■■■□□ 2.87
PXN-205ENST00000440827 ZCCHC6Q5VYS8 1495 aaKnown RBP32.64■■■□□ 2.82
PXN-205ENST00000440827 MYO15BQ96JP2 1530 aa32.62■■■□□ 2.81
PXN-205ENST00000440827 PABPN1Q86U42 306 aaKnown RBP eCLIP32.46■■■□□ 2.79
PXN-205ENST00000440827 DCAF1Q9Y4B6 1507 aa32.41■■■□□ 2.78
PXN-205ENST00000440827 UNC13AQ9UPW8 1703 aa32.33■■■□□ 2.77
PXN-205ENST00000440827 BICRAQ9NZM4 1560 aa32.12■■■□□ 2.73
PXN-205ENST00000440827 DNAJC5BQ9UF47 199 aa32.12■■■□□ 2.73
PXN-205ENST00000440827 SCRIBQ14160 1630 aa32.04■■■□□ 2.72
PXN-205ENST00000440827 SHROOM4Q9ULL8 1493 aa31.66■■■□□ 2.66
PXN-205ENST00000440827 EIF4G1Q04637 1599 aaKnown RBP31.33■■■□□ 2.61
PXN-205ENST00000440827 CC2D2AQ9P2K1 1620 aa31.29■■■□□ 2.6
PXN-205ENST00000440827 CECR2Q9BXF3 1484 aa31.16■■■□□ 2.58
PXN-205ENST00000440827 SMARCA4P51532 1647 aa30.55■■■□□ 2.48
PXN-205ENST00000440827 NCAPD3P42695 1498 aa30.48■■■□□ 2.47
PXN-205ENST00000440827 ATAD2BQ9ULI0 1458 aa30.48■■■□□ 2.47
PXN-205ENST00000440827 BAZ1AQ9NRL2 1556 aaPredicted RBP30.48■■■□□ 2.47
PXN-205ENST00000440827 SMARCA2P51531 1590 aa30.4■■■□□ 2.46
PXN-205ENST00000440827 MROH2BQ7Z745 1585 aa30.32■■■□□ 2.45
PXN-205ENST00000440827 HMGXB3Q12766 1538 aa30.26■■■□□ 2.43
PXN-205ENST00000440827 BAZ1BQ9UIG0 1483 aaKnown RBP30.24■■■□□ 2.43
PXN-205ENST00000440827 PEG3Q9GZU2 1588 aa30.17■■■□□ 2.42
PXN-205ENST00000440827 WIZO95785 1651 aa29.98■■■□□ 2.39
PXN-205ENST00000440827 ERCC6Q03468 1493 aa29.93■■■□□ 2.38
PXN-205ENST00000440827 NESP48681 1621 aa29.92■■■□□ 2.38
PXN-205ENST00000440827 RSF1Q96T23 1441 aaPredicted RBP29.88■■■□□ 2.37
PXN-205ENST00000440827 LAMC3Q9Y6N6 1575 aa29.7■■■□□ 2.35
PXN-205ENST00000440827 CADPSQ9ULU8 1353 aa29.63■■■□□ 2.33
PXN-205ENST00000440827 TOP2AP11388 1531 aaKnown RBP29.61■■■□□ 2.33
PXN-205ENST00000440827 CUX2O14529 1486 aa29.6■■■□□ 2.33
PXN-205ENST00000440827 PDS5BQ9NTI5 1447 aa29.58■■■□□ 2.33
PXN-205ENST00000440827 KIF21AQ7Z4S6 1674 aa29.48■■■□□ 2.31
PXN-205ENST00000440827 THOC2Q8NI27 1593 aaKnown RBP29.41■■■□□ 2.3
PXN-205ENST00000440827 CFTRP13569 1480 aa29.35■■■□□ 2.29
PXN-205ENST00000440827 CCDC88BA6NC98 1476 aa29.31■■■□□ 2.28
PXN-205ENST00000440827 FANCD2Q9BXW9 1451 aa29.29■■■□□ 2.28
PXN-205ENST00000440827 MRC2Q9UBG0 1479 aa29.28■■■□□ 2.28
PXN-205ENST00000440827 CEP164Q9UPV0 1460 aa29.28■■■□□ 2.28
PXN-205ENST00000440827 WDR62O43379 1518 aa29.14■■■□□ 2.25
PXN-205ENST00000440827 DNAJC5Q9H3Z4 198 aa29.12■■■□□ 2.25
PXN-205ENST00000440827 SUPT5HO00267 1087 aaKnown RBP29.11■■■□□ 2.25
PXN-205ENST00000440827 PRDM2Q13029 1718 aa29.01■■■□□ 2.23
PXN-205ENST00000440827 URB2Q14146 1524 aaKnown RBP28.99■■■□□ 2.23
PXN-205ENST00000440827 TOPBP1Q92547 1522 aa28.77■■■□□ 2.2
PXN-205ENST00000440827 ABCC8Q09428 1581 aa28.72■■■□□ 2.19
PXN-205ENST00000440827 DNMBPQ6XZF7 1577 aa28.68■■■□□ 2.18
PXN-205ENST00000440827 IFT140Q96RY7 1462 aa28.65■■■□□ 2.18
PXN-205ENST00000440827 ZNF608Q9ULD9 1512 aaPredicted RBP28.59■■■□□ 2.17
PXN-205ENST00000440827 POLA1P09884 1462 aaPredicted RBP28.51■■■□□ 2.15
PXN-205ENST00000440827 CUX1P39880 1505 aa28.46■■■□□ 2.15
PXN-205ENST00000440827 RAD54L2Q9Y4B4 1467 aa28.46■■■□□ 2.15
PXN-205ENST00000440827 OSCARQ8IYS5 282 aa28.45■■■□□ 2.14
PXN-205ENST00000440827 SOGA1O94964 1423 aa28.44■■■□□ 2.14
PXN-205ENST00000440827 TARBP1Q13395 1621 aaKnown RBP28.43■■■□□ 2.14
PXN-205ENST00000440827 AQRO60306 1485 aaKnown RBP eCLIP28.43■■■□□ 2.14
PXN-205ENST00000440827 FGD5Q6ZNL6 1462 aa28.42■■■□□ 2.14
PXN-205ENST00000440827 EIF4G3O43432 1585 aaKnown RBP28.41■■■□□ 2.14
PXN-205ENST00000440827 TDRD9Q8NDG6 1382 aaKnown RBP28.36■■■□□ 2.13
PXN-205ENST00000440827 FBLN2P98095 1184 aa28.27■■■□□ 2.12
PXN-205ENST00000440827 WRNQ14191 1432 aaPredicted RBP eCLIP28.19■■■□□ 2.1
PXN-205ENST00000440827 TRIM41Q8WV44 630 aa28.19■■■□□ 2.1
PXN-205ENST00000440827 WDR97A6NE52 1622 aa28.12■■■□□ 2.09
PXN-205ENST00000440827 SNAPC4Q5SXM2 1469 aa28.12■■■□□ 2.09
PXN-205ENST00000440827 CHD1O14646 1710 aa28.11■■■□□ 2.09
PXN-205ENST00000440827 SYNJ1O43426 1573 aa28.11■■■□□ 2.09
PXN-205ENST00000440827 GRIN2BQ13224 1484 aa28.1■■■□□ 2.09
PXN-205ENST00000440827 TOP2BQ02880 1626 aa28.1■■■□□ 2.09
PXN-205ENST00000440827 GAPVD1Q14C86 1478 aa28.08■■■□□ 2.09
PXN-205ENST00000440827 ABCA10Q8WWZ4 1543 aa28.08■■■□□ 2.08
PXN-205ENST00000440827 CHMP7Q8WUX9 453 aaPredicted RBP28.07■■■□□ 2.08
PXN-205ENST00000440827 BIVM-ERCC5R4GMW8 1640 aa28.07■■■□□ 2.08
PXN-205ENST00000440827 MAGI1Q96QZ7 1491 aaPredicted RBP28.02■■■□□ 2.08
PXN-205ENST00000440827 PBRM1Q86U86 1689 aa27.97■■■□□ 2.07
PXN-205ENST00000440827 ABCA5Q8WWZ7 1642 aa27.96■■■□□ 2.07
PXN-205ENST00000440827 SYNJ2O15056 1496 aa27.94■■■□□ 2.06
PXN-205ENST00000440827 RIMBP3CA6NJZ7 1639 aa27.93■■■□□ 2.06
PXN-205ENST00000440827 RIMBP3BA6NNM3 1639 aa27.93■■■□□ 2.06
PXN-205ENST00000440827 RIMBP3Q9UFD9 1639 aa27.93■■■□□ 2.06
PXN-205ENST00000440827 ARHGEF11O15085 1522 aa27.91■■■□□ 2.06
PXN-205ENST00000440827 CYB5RLQ6IPT4 315 aa27.81■■■□□ 2.04
PXN-205ENST00000440827 CLASP1Q7Z460 1538 aa27.77■■■□□ 2.04
PXN-205ENST00000440827 ADAMTS12P58397 1594 aa27.74■■■□□ 2.03
PXN-205ENST00000440827 GRIN2AQ12879 1464 aa27.73■■■□□ 2.03
PXN-205ENST00000440827 FHAD1B1AJZ9 1412 aa27.73■■■□□ 2.03
PXN-205ENST00000440827 ERICH3Q5RHP9 1530 aa27.72■■■□□ 2.03
PXN-205ENST00000440827 ARAP1Q96P48 1450 aa27.67■■■□□ 2.02
PXN-205ENST00000440827 KIF27Q86VH2 1401 aa27.64■■■□□ 2.02
PXN-205ENST00000440827 CEP170Q5SW79 1584 aa27.59■■■□□ 2.01
PXN-205ENST00000440827 NUP160Q12769 1436 aa27.58■■■□□ 2.01
PXN-205ENST00000440827 IGF1RP08069 1367 aa27.56■■■□□ 2
PXN-205ENST00000440827 ERCC6L2Q5T890 1561 aa27.44■■□□□ 1.98
PXN-205ENST00000440827 JPH4Q96JJ6 628 aa27.42■■□□□ 1.98
PXN-205ENST00000440827 CUL7Q14999 1698 aa27.41■■□□□ 1.98
PXN-205ENST00000440827 CARMIL1Q5VZK9 1371 aa27.41■■□□□ 1.98
PXN-205ENST00000440827 TRHP20396 242 aaPredicted RBP27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms