RNA–Protein interactions for RNA: ENST00000552550.5

PXN-219, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-219ENST00000552550 NISCHQ9Y2I1 1504 aa38.06■■■■□ 3.68
PXN-219ENST00000552550 ABCC9O60706 1549 aa34.77■■■■□ 3.16
PXN-219ENST00000552550 CCDC180Q9P1Z9 1646 aa34.25■■■■□ 3.07
PXN-219ENST00000552550 DNAJC5BQ9UF47 199 aa33.17■■■□□ 2.9
PXN-219ENST00000552550 RB1CC1Q8TDY2 1594 aa32.83■■■□□ 2.85
PXN-219ENST00000552550 NACADO15069 1562 aa32.51■■■□□ 2.79
PXN-219ENST00000552550 PABPN1Q86U42 306 aaKnown RBP eCLIP32.36■■■□□ 2.77
PXN-219ENST00000552550 DCAF8L2P0C7V8 631 aa32.3■■■□□ 2.76
PXN-219ENST00000552550 UNC13AQ9UPW8 1703 aa32.14■■■□□ 2.74
PXN-219ENST00000552550 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
PXN-219ENST00000552550 MYO15BQ96JP2 1530 aa31.94■■■□□ 2.7
PXN-219ENST00000552550 ZCCHC6Q5VYS8 1495 aaKnown RBP31.44■■■□□ 2.62
PXN-219ENST00000552550 SHROOM4Q9ULL8 1493 aa31.38■■■□□ 2.61
PXN-219ENST00000552550 DCAF1Q9Y4B6 1507 aa31.38■■■□□ 2.61
PXN-219ENST00000552550 CC2D2AQ9P2K1 1620 aa31.37■■■□□ 2.61
PXN-219ENST00000552550 CECR2Q9BXF3 1484 aa31.34■■■□□ 2.61
PXN-219ENST00000552550 SCRIBQ14160 1630 aa31.23■■■□□ 2.59
PXN-219ENST00000552550 EIF4G1Q04637 1599 aaKnown RBP31.2■■■□□ 2.58
PXN-219ENST00000552550 DNAJC5Q9H3Z4 198 aa30.68■■■□□ 2.5
PXN-219ENST00000552550 NCAPD3P42695 1498 aa30.09■■■□□ 2.41
PXN-219ENST00000552550 CUX2O14529 1486 aa30.08■■■□□ 2.41
PXN-219ENST00000552550 ERCC6Q03468 1493 aa29.96■■■□□ 2.39
PXN-219ENST00000552550 ATAD2BQ9ULI0 1458 aa29.93■■■□□ 2.38
PXN-219ENST00000552550 NESP48681 1621 aa29.79■■■□□ 2.36
PXN-219ENST00000552550 HMGXB3Q12766 1538 aa29.76■■■□□ 2.35
PXN-219ENST00000552550 SMARCA4P51532 1647 aa29.75■■■□□ 2.35
PXN-219ENST00000552550 SMARCA2P51531 1590 aa29.73■■■□□ 2.35
PXN-219ENST00000552550 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
PXN-219ENST00000552550 THOC2Q8NI27 1593 aaKnown RBP29.52■■■□□ 2.32
PXN-219ENST00000552550 BAZ1AQ9NRL2 1556 aaPredicted RBP29.52■■■□□ 2.32
PXN-219ENST00000552550 PEG3Q9GZU2 1588 aa29.48■■■□□ 2.31
PXN-219ENST00000552550 LAMC3Q9Y6N6 1575 aa29.4■■■□□ 2.3
PXN-219ENST00000552550 MROH2BQ7Z745 1585 aa29.36■■■□□ 2.29
PXN-219ENST00000552550 KIF21AQ7Z4S6 1674 aa29.31■■■□□ 2.28
PXN-219ENST00000552550 PDS5BQ9NTI5 1447 aa29.25■■■□□ 2.27
PXN-219ENST00000552550 CADPSQ9ULU8 1353 aa29.14■■■□□ 2.26
PXN-219ENST00000552550 TRIM41Q8WV44 630 aa29.09■■■□□ 2.25
PXN-219ENST00000552550 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
PXN-219ENST00000552550 WDR62O43379 1518 aa29■■■□□ 2.23
PXN-219ENST00000552550 WIZO95785 1651 aa28.96■■■□□ 2.23
PXN-219ENST00000552550 CEP164Q9UPV0 1460 aa28.82■■■□□ 2.2
PXN-219ENST00000552550 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
PXN-219ENST00000552550 CFTRP13569 1480 aa28.72■■■□□ 2.19
PXN-219ENST00000552550 OSCARQ8IYS5 282 aa28.68■■■□□ 2.18
PXN-219ENST00000552550 URB2Q14146 1524 aaKnown RBP28.63■■■□□ 2.17
PXN-219ENST00000552550 RSF1Q96T23 1441 aaPredicted RBP28.6■■■□□ 2.17
PXN-219ENST00000552550 TOP2AP11388 1531 aaKnown RBP28.52■■■□□ 2.16
PXN-219ENST00000552550 ZNF608Q9ULD9 1512 aaPredicted RBP28.37■■■□□ 2.13
PXN-219ENST00000552550 RIMBP3CA6NJZ7 1639 aa28.36■■■□□ 2.13
PXN-219ENST00000552550 RIMBP3BA6NNM3 1639 aa28.36■■■□□ 2.13
PXN-219ENST00000552550 RIMBP3Q9UFD9 1639 aa28.36■■■□□ 2.13
PXN-219ENST00000552550 PRDM2Q13029 1718 aa28.28■■■□□ 2.12
PXN-219ENST00000552550 IFT140Q96RY7 1462 aa28.27■■■□□ 2.12
PXN-219ENST00000552550 CCDC88BA6NC98 1476 aa28.27■■■□□ 2.12
PXN-219ENST00000552550 ARHGEF11O15085 1522 aa28.23■■■□□ 2.11
PXN-219ENST00000552550 TOPBP1Q92547 1522 aa28.21■■■□□ 2.11
PXN-219ENST00000552550 EIF4G3O43432 1585 aaKnown RBP28.1■■■□□ 2.09
PXN-219ENST00000552550 CYB5RLQ6IPT4 315 aa28.07■■■□□ 2.08
PXN-219ENST00000552550 ABCC8Q09428 1581 aa28.04■■■□□ 2.08
PXN-219ENST00000552550 AQRO60306 1485 aaKnown RBP eCLIP28.04■■■□□ 2.082e-6■■■□□ 15.2
PXN-219ENST00000552550 DNMBPQ6XZF7 1577 aa28.03■■■□□ 2.08
PXN-219ENST00000552550 TARBP1Q13395 1621 aaKnown RBP28.01■■■□□ 2.07
PXN-219ENST00000552550 CHD1O14646 1710 aa27.97■■■□□ 2.07
PXN-219ENST00000552550 ARAP1Q96P48 1450 aa27.94■■■□□ 2.06
PXN-219ENST00000552550 POLA1P09884 1462 aaPredicted RBP27.9■■■□□ 2.06
PXN-219ENST00000552550 FBLN2P98095 1184 aa27.87■■■□□ 2.05
PXN-219ENST00000552550 RAD54L2Q9Y4B4 1467 aa27.84■■■□□ 2.05
PXN-219ENST00000552550 TRHP20396 242 aaPredicted RBP27.84■■■□□ 2.05
PXN-219ENST00000552550 TDRD9Q8NDG6 1382 aaKnown RBP27.8■■■□□ 2.04
PXN-219ENST00000552550 SOGA1O94964 1423 aa27.75■■■□□ 2.03
PXN-219ENST00000552550 SNAPC4Q5SXM2 1469 aa27.69■■■□□ 2.02
PXN-219ENST00000552550 CLASP1Q7Z460 1538 aa27.68■■■□□ 2.02
PXN-219ENST00000552550 FGD5Q6ZNL6 1462 aa27.65■■■□□ 2.02
PXN-219ENST00000552550 CHMP7Q8WUX9 453 aaPredicted RBP27.6■■■□□ 2.01
PXN-219ENST00000552550 WDR97A6NE52 1622 aa27.59■■■□□ 2.01
PXN-219ENST00000552550 CUX1P39880 1505 aa27.58■■■□□ 2.01
PXN-219ENST00000552550 MAGI1Q96QZ7 1491 aaPredicted RBP27.56■■■□□ 2
PXN-219ENST00000552550 SYNJ1O43426 1573 aa27.55■■■□□ 2
PXN-219ENST00000552550 GRIN2BQ13224 1484 aa27.53■■■□□ 2
PXN-219ENST00000552550 SYNJ2O15056 1496 aa27.5■■□□□ 1.99
PXN-219ENST00000552550 GAPVD1Q14C86 1478 aa27.39■■□□□ 1.98
PXN-219ENST00000552550 PBRM1Q86U86 1689 aa27.37■■□□□ 1.97
PXN-219ENST00000552550 ABCA10Q8WWZ4 1543 aa27.31■■□□□ 1.96
PXN-219ENST00000552550 ABCA5Q8WWZ7 1642 aa27.3■■□□□ 1.96
PXN-219ENST00000552550 AEBP2Q6ZN18 517 aaPredicted RBP27.29■■□□□ 1.96
PXN-219ENST00000552550 ERCC6L2Q5T890 1561 aa27.28■■□□□ 1.96
PXN-219ENST00000552550 GRIN2AQ12879 1464 aa27.19■■□□□ 1.94
PXN-219ENST00000552550 NUP160Q12769 1436 aa27.15■■□□□ 1.94
PXN-219ENST00000552550 CEP170Q5SW79 1584 aa27.14■■□□□ 1.94
PXN-219ENST00000552550 ADAMTS12P58397 1594 aa27.11■■□□□ 1.93
PXN-219ENST00000552550 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
PXN-219ENST00000552550 SHROOM2Q13796 1616 aa27.06■■□□□ 1.92
PXN-219ENST00000552550 FHAD1B1AJZ9 1412 aa27.02■■□□□ 1.92
PXN-219ENST00000552550 TOP2BQ02880 1626 aa26.98■■□□□ 1.91
PXN-219ENST00000552550 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
PXN-219ENST00000552550 SUPT5HO00267 1087 aaKnown RBP26.97■■□□□ 1.91
PXN-219ENST00000552550 KIF13AQ9H1H9 1805 aa26.93■■□□□ 1.9
PXN-219ENST00000552550 ERICH3Q5RHP9 1530 aa26.92■■□□□ 1.9
PXN-219ENST00000552550 PRG4Q92954 1404 aaPredicted RBP26.9■■□□□ 1.9
PXN-219ENST00000552550 JPH4Q96JJ6 628 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms