RNA–Protein interactions for RNA: ENST00000441747.6

PCSK4-202, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 2

Gene PCSK4, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-202ENST00000441747 NISCHQ9Y2I1 1504 aa34.99■■■■□ 3.19
PCSK4-202ENST00000441747 CCDC180Q9P1Z9 1646 aa30.19■■■□□ 2.42
PCSK4-202ENST00000441747 ZCCHC6Q5VYS8 1495 aaKnown RBP29.55■■■□□ 2.32
PCSK4-202ENST00000441747 SHROOM4Q9ULL8 1493 aa28.96■■■□□ 2.23
PCSK4-202ENST00000441747 DCAF1Q9Y4B6 1507 aa28.95■■■□□ 2.22
PCSK4-202ENST00000441747 DCAF8L2P0C7V8 631 aa28.53■■■□□ 2.16
PCSK4-202ENST00000441747 MYO15BQ96JP2 1530 aa28.35■■■□□ 2.13
PCSK4-202ENST00000441747 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
PCSK4-202ENST00000441747 NACADO15069 1562 aa27.94■■■□□ 2.06
PCSK4-202ENST00000441747 ABCC9O60706 1549 aa27.91■■■□□ 2.06
PCSK4-202ENST00000441747 SCRIBQ14160 1630 aa27.85■■■□□ 2.05
PCSK4-202ENST00000441747 RB1CC1Q8TDY2 1594 aa27.52■■■□□ 2
PCSK4-202ENST00000441747 RSF1Q96T23 1441 aaPredicted RBP27.41■■□□□ 1.98
PCSK4-202ENST00000441747 CHIC1Q5VXU3 224 aa27.37■■□□□ 1.97
PCSK4-202ENST00000441747 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
PCSK4-202ENST00000441747 UNC13AQ9UPW8 1703 aa27.09■■□□□ 1.93
PCSK4-202ENST00000441747 MROH2BQ7Z745 1585 aa27.08■■□□□ 1.92
PCSK4-202ENST00000441747 BAZ1AQ9NRL2 1556 aaPredicted RBP26.94■■□□□ 1.9
PCSK4-202ENST00000441747 WIZO95785 1651 aa26.89■■□□□ 1.9
PCSK4-202ENST00000441747 BICRAQ9NZM4 1560 aa26.78■■□□□ 1.88
PCSK4-202ENST00000441747 SMARCA4P51532 1647 aa26.76■■□□□ 1.87
PCSK4-202ENST00000441747 TOP2AP11388 1531 aaKnown RBP26.61■■□□□ 1.85
PCSK4-202ENST00000441747 EIF4G1Q04637 1599 aaKnown RBP26.53■■□□□ 1.84
PCSK4-202ENST00000441747 PABPN1Q86U42 306 aaKnown RBP eCLIP26.45■■□□□ 1.83
PCSK4-202ENST00000441747 PEG3Q9GZU2 1588 aa26.43■■□□□ 1.82
PCSK4-202ENST00000441747 TRIM41Q8WV44 630 aa26.41■■□□□ 1.82
PCSK4-202ENST00000441747 SMARCA2P51531 1590 aa26.4■■□□□ 1.82
PCSK4-202ENST00000441747 CCDC88BA6NC98 1476 aa26.35■■□□□ 1.81
PCSK4-202ENST00000441747 LOC105371045A0A1W2PR82 267 aa26.34■■□□□ 1.81
PCSK4-202ENST00000441747 HRCP23327 699 aa26.23■■□□□ 1.79
PCSK4-202ENST00000441747 ATAD2BQ9ULI0 1458 aa26.14■■□□□ 1.78
PCSK4-202ENST00000441747 ABCC8Q09428 1581 aa26.02■■□□□ 1.76
PCSK4-202ENST00000441747 BAZ1BQ9UIG0 1483 aaKnown RBP26■■□□□ 1.75
PCSK4-202ENST00000441747 FAM9AQ8IZU1 332 aaPredicted RBP25.95■■□□□ 1.74
PCSK4-202ENST00000441747 HMGXB3Q12766 1538 aa25.83■■□□□ 1.73
PCSK4-202ENST00000441747 NCAPD3P42695 1498 aa25.8■■□□□ 1.72
PCSK4-202ENST00000441747 PCGF6Q9BYE7 350 aa25.8■■□□□ 1.72
PCSK4-202ENST00000441747 PPARGC1BQ86YN6 1023 aaKnown RBP25.77■■□□□ 1.72
PCSK4-202ENST00000441747 WRNQ14191 1432 aaPredicted RBP eCLIP25.74■■□□□ 1.71
PCSK4-202ENST00000441747 EEA1Q15075 1411 aa25.71■■□□□ 1.71
PCSK4-202ENST00000441747 SOGA1O94964 1423 aa25.67■■□□□ 1.7
PCSK4-202ENST00000441747 SYNJ1O43426 1573 aa25.66■■□□□ 1.7
PCSK4-202ENST00000441747 PELP1Q8IZL8 1130 aaKnown RBP25.65■■□□□ 1.7
PCSK4-202ENST00000441747 TRIM26Q12899 539 aaPredicted RBP25.64■■□□□ 1.7
PCSK4-202ENST00000441747 RUSC2Q8N2Y8 1516 aa25.55■■□□□ 1.68
PCSK4-202ENST00000441747 EHMT2Q96KQ7 1210 aa25.54■■□□□ 1.68
PCSK4-202ENST00000441747 TOP2BQ02880 1626 aa25.49■■□□□ 1.67
PCSK4-202ENST00000441747 CSRNP3Q8WYN3 585 aa25.49■■□□□ 1.67
PCSK4-202ENST00000441747 BIVM-ERCC5R4GMW8 1640 aa25.47■■□□□ 1.67
PCSK4-202ENST00000441747 TNIKQ9UKE5 1360 aa25.46■■□□□ 1.67
PCSK4-202ENST00000441747 CFTRP13569 1480 aa25.43■■□□□ 1.66
PCSK4-202ENST00000441747 KIF21BO75037 1637 aa25.39■■□□□ 1.66
PCSK4-202ENST00000441747 GOLGA3Q08378 1498 aa25.39■■□□□ 1.65
PCSK4-202ENST00000441747 CEP162Q5TB80 1403 aa25.37■■□□□ 1.65
PCSK4-202ENST00000441747 PRDM2Q13029 1718 aa25.34■■□□□ 1.65
PCSK4-202ENST00000441747 CEP164Q9UPV0 1460 aa25.32■■□□□ 1.64
PCSK4-202ENST00000441747 CC2D2AQ9P2K1 1620 aa25.31■■□□□ 1.64
PCSK4-202ENST00000441747 CUX1P39880 1505 aa25.27■■□□□ 1.64
PCSK4-202ENST00000441747 CADPSQ9ULU8 1353 aa25.16■■□□□ 1.62
PCSK4-202ENST00000441747 UBTFP17480 764 aaKnown RBP25.16■■□□□ 1.62
PCSK4-202ENST00000441747 RAPGEF2Q9Y4G8 1499 aa25.12■■□□□ 1.61
PCSK4-202ENST00000441747 ERICH3Q5RHP9 1530 aa25.09■■□□□ 1.61
PCSK4-202ENST00000441747 PRXQ9BXM0 1461 aa25.07■■□□□ 1.6
PCSK4-202ENST00000441747 SCAF1Q9H7N4 1312 aaKnown RBP25.01■■□□□ 1.59
PCSK4-202ENST00000441747 KIF27Q86VH2 1401 aa25■■□□□ 1.59
PCSK4-202ENST00000441747 CLIP1P30622 1438 aa25■■□□□ 1.59
PCSK4-202ENST00000441747 ZEB1P37275 1124 aaPredicted RBP24.93■■□□□ 1.58
PCSK4-202ENST00000441747 VPS8Q8N3P4 1428 aa24.9■■□□□ 1.58
PCSK4-202ENST00000441747 FANCD2Q9BXW9 1451 aa24.89■■□□□ 1.58
PCSK4-202ENST00000441747 FGD5Q6ZNL6 1462 aa24.86■■□□□ 1.57
PCSK4-202ENST00000441747 DNMBPQ6XZF7 1577 aa24.81■■□□□ 1.56
PCSK4-202ENST00000441747 CUX2O14529 1486 aa24.8■■□□□ 1.56
PCSK4-202ENST00000441747 LAMC3Q9Y6N6 1575 aa24.8■■□□□ 1.56
PCSK4-202ENST00000441747 NESP48681 1621 aa24.76■■□□□ 1.55
PCSK4-202ENST00000441747 IGF1RP08069 1367 aa24.76■■□□□ 1.55
PCSK4-202ENST00000441747 ARAP1Q96P48 1450 aa24.74■■□□□ 1.55
PCSK4-202ENST00000441747 TOPBP1Q92547 1522 aa24.72■■□□□ 1.55
PCSK4-202ENST00000441747 MYT1Q01538 1121 aa24.7■■□□□ 1.54
PCSK4-202ENST00000441747 ABCA10Q8WWZ4 1543 aa24.67■■□□□ 1.54
PCSK4-202ENST00000441747 POLA1P09884 1462 aaPredicted RBP24.65■■□□□ 1.54
PCSK4-202ENST00000441747 TTBK1Q5TCY1 1321 aaPredicted RBP24.63■■□□□ 1.53
PCSK4-202ENST00000441747 CARMIL1Q5VZK9 1371 aa24.61■■□□□ 1.53
PCSK4-202ENST00000441747 ARHGAP35Q9NRY4 1499 aa24.6■■□□□ 1.53
PCSK4-202ENST00000441747 URB2Q14146 1524 aaKnown RBP24.59■■□□□ 1.53
PCSK4-202ENST00000441747 RAD54L2Q9Y4B4 1467 aa24.58■■□□□ 1.53
PCSK4-202ENST00000441747 WDR97A6NE52 1622 aa24.58■■□□□ 1.52
PCSK4-202ENST00000441747 RANGAP1P46060 587 aaPredicted RBP24.54■■□□□ 1.52
PCSK4-202ENST00000441747 PDS5BQ9NTI5 1447 aa24.54■■□□□ 1.52
PCSK4-202ENST00000441747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.53■■□□□ 1.52
PCSK4-202ENST00000441747 APLP2Q06481 763 aa24.52■■□□□ 1.52
PCSK4-202ENST00000441747 DNAJC5BQ9UF47 199 aa24.5■■□□□ 1.51
PCSK4-202ENST00000441747 CUL7Q14999 1698 aa24.5■■□□□ 1.51
PCSK4-202ENST00000441747 KIF21AQ7Z4S6 1674 aa24.48■■□□□ 1.51
PCSK4-202ENST00000441747 CCER1Q8TC90 406 aaPredicted RBP24.47■■□□□ 1.51
PCSK4-202ENST00000441747 ABCA5Q8WWZ7 1642 aa24.44■■□□□ 1.5
PCSK4-202ENST00000441747 MAP3K1Q13233 1512 aa24.38■■□□□ 1.49
PCSK4-202ENST00000441747 KANK4Q5T7N3 995 aaPredicted RBP24.34■■□□□ 1.49
PCSK4-202ENST00000441747 CTTNBP2Q8WZ74 1663 aa24.34■■□□□ 1.49
PCSK4-202ENST00000441747 TARBP1Q13395 1621 aaKnown RBP24.33■■□□□ 1.49
PCSK4-202ENST00000441747 EFCAB5A4FU69 1503 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms