RNA–Protein interactions for RNA: ENST00000441774.1

ABCF2-203, Transcript of ATP binding cassette subfamily F member 2, humanhuman

TSL 3

Gene ABCF2, Length 941 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF2-203ENST00000441774 NISCHQ9Y2I1 1504 aa50.04■■■■■ 5.6
ABCF2-203ENST00000441774 CCDC180Q9P1Z9 1646 aa44.66■■■■■ 4.74
ABCF2-203ENST00000441774 ABCC9O60706 1549 aa44.03■■■■■ 4.64
ABCF2-203ENST00000441774 RB1CC1Q8TDY2 1594 aa42.21■■■■■ 4.35
ABCF2-203ENST00000441774 NACADO15069 1562 aa42.09■■■■■ 4.33
ABCF2-203ENST00000441774 DCAF8L2P0C7V8 631 aa41.85■■■■■ 4.29
ABCF2-203ENST00000441774 MYO15BQ96JP2 1530 aa41.75■■■■■ 4.27
ABCF2-203ENST00000441774 ZCCHC6Q5VYS8 1495 aaKnown RBP41.61■■■■■ 4.25
ABCF2-203ENST00000441774 DCAF1Q9Y4B6 1507 aa41.42■■■■■ 4.22
ABCF2-203ENST00000441774 UNC13AQ9UPW8 1703 aa41.22■■■■■ 4.19
ABCF2-203ENST00000441774 PABPN1Q86U42 306 aaKnown RBP eCLIP41.06■■■■■ 4.16
ABCF2-203ENST00000441774 BICRAQ9NZM4 1560 aa40.96■■■■■ 4.15
ABCF2-203ENST00000441774 DNAJC5BQ9UF47 199 aa40.78■■■■■ 4.12
ABCF2-203ENST00000441774 SCRIBQ14160 1630 aa40.67■■■■■ 4.1
ABCF2-203ENST00000441774 SHROOM4Q9ULL8 1493 aa40.55■■■■■ 4.08
ABCF2-203ENST00000441774 EIF4G1Q04637 1599 aaKnown RBP39.9■■■■□ 3.98
ABCF2-203ENST00000441774 CC2D2AQ9P2K1 1620 aa39.82■■■■□ 3.96
ABCF2-203ENST00000441774 CECR2Q9BXF3 1484 aa39.62■■■■□ 3.93
ABCF2-203ENST00000441774 SMARCA4P51532 1647 aa38.9■■■■□ 3.82
ABCF2-203ENST00000441774 NCAPD3P42695 1498 aa38.86■■■■□ 3.81
ABCF2-203ENST00000441774 BAZ1AQ9NRL2 1556 aaPredicted RBP38.81■■■■□ 3.8
ABCF2-203ENST00000441774 ATAD2BQ9ULI0 1458 aa38.8■■■■□ 3.8
ABCF2-203ENST00000441774 SMARCA2P51531 1590 aa38.73■■■■□ 3.79
ABCF2-203ENST00000441774 HMGXB3Q12766 1538 aa38.62■■■■□ 3.77
ABCF2-203ENST00000441774 PEG3Q9GZU2 1588 aa38.57■■■■□ 3.76
ABCF2-203ENST00000441774 MROH2BQ7Z745 1585 aa38.54■■■■□ 3.76
ABCF2-203ENST00000441774 BAZ1BQ9UIG0 1483 aaKnown RBP38.44■■■■□ 3.74
ABCF2-203ENST00000441774 WIZO95785 1651 aa38.08■■■■□ 3.69
ABCF2-203ENST00000441774 NESP48681 1621 aa37.99■■■■□ 3.67
ABCF2-203ENST00000441774 ERCC6Q03468 1493 aa37.97■■■■□ 3.67
ABCF2-203ENST00000441774 RSF1Q96T23 1441 aaPredicted RBP37.97■■■■□ 3.67
ABCF2-203ENST00000441774 LAMC3Q9Y6N6 1575 aa37.87■■■■□ 3.65
ABCF2-203ENST00000441774 CUX2O14529 1486 aa37.77■■■■□ 3.64
ABCF2-203ENST00000441774 TOP2AP11388 1531 aaKnown RBP37.69■■■■□ 3.62
ABCF2-203ENST00000441774 CADPSQ9ULU8 1353 aa37.68■■■■□ 3.62
ABCF2-203ENST00000441774 PDS5BQ9NTI5 1447 aa37.62■■■■□ 3.61
ABCF2-203ENST00000441774 THOC2Q8NI27 1593 aaKnown RBP37.53■■■■□ 3.6
ABCF2-203ENST00000441774 KIF21AQ7Z4S6 1674 aa37.52■■■■□ 3.6
ABCF2-203ENST00000441774 CFTRP13569 1480 aa37.39■■■■□ 3.58
ABCF2-203ENST00000441774 MRC2Q9UBG0 1479 aa37.26■■■■□ 3.56
ABCF2-203ENST00000441774 CCDC88BA6NC98 1476 aa37.24■■■■□ 3.55
ABCF2-203ENST00000441774 FANCD2Q9BXW9 1451 aa37.24■■■■□ 3.55
ABCF2-203ENST00000441774 CEP164Q9UPV0 1460 aa37.22■■■■□ 3.55
ABCF2-203ENST00000441774 WDR62O43379 1518 aa37.17■■■■□ 3.54
ABCF2-203ENST00000441774 DNAJC5Q9H3Z4 198 aa37.04■■■■□ 3.52
ABCF2-203ENST00000441774 PRDM2Q13029 1718 aa37.03■■■■□ 3.52
ABCF2-203ENST00000441774 URB2Q14146 1524 aaKnown RBP36.9■■■■□ 3.5
ABCF2-203ENST00000441774 SUPT5HO00267 1087 aaKnown RBP36.63■■■■□ 3.45
ABCF2-203ENST00000441774 TOPBP1Q92547 1522 aa36.6■■■■□ 3.45
ABCF2-203ENST00000441774 ABCC8Q09428 1581 aa36.58■■■■□ 3.45
ABCF2-203ENST00000441774 DNMBPQ6XZF7 1577 aa36.53■■■■□ 3.44
ABCF2-203ENST00000441774 IFT140Q96RY7 1462 aa36.48■■■■□ 3.43
ABCF2-203ENST00000441774 ZNF608Q9ULD9 1512 aaPredicted RBP36.33■■■■□ 3.41
ABCF2-203ENST00000441774 POLA1P09884 1462 aaPredicted RBP36.27■■■■□ 3.4
ABCF2-203ENST00000441774 TARBP1Q13395 1621 aaKnown RBP36.24■■■■□ 3.39
ABCF2-203ENST00000441774 CUX1P39880 1505 aa36.18■■■■□ 3.38
ABCF2-203ENST00000441774 EIF4G3O43432 1585 aaKnown RBP36.17■■■■□ 3.38
ABCF2-203ENST00000441774 FGD5Q6ZNL6 1462 aa36.11■■■■□ 3.37
ABCF2-203ENST00000441774 RAD54L2Q9Y4B4 1467 aa36.1■■■■□ 3.37
ABCF2-203ENST00000441774 SOGA1O94964 1423 aa36.09■■■■□ 3.37
ABCF2-203ENST00000441774 OSCARQ8IYS5 282 aa36.09■■■■□ 3.37
ABCF2-203ENST00000441774 AQRO60306 1485 aaKnown RBP eCLIP36.06■■■■□ 3.363e-6■■■■□ 24.7
ABCF2-203ENST00000441774 WDR97A6NE52 1622 aa35.96■■■■□ 3.35
ABCF2-203ENST00000441774 TDRD9Q8NDG6 1382 aaKnown RBP35.93■■■■□ 3.34
ABCF2-203ENST00000441774 WRNQ14191 1432 aaPredicted RBP eCLIP35.8■■■■□ 3.32
ABCF2-203ENST00000441774 TOP2BQ02880 1626 aa35.77■■■■□ 3.32
ABCF2-203ENST00000441774 BIVM-ERCC5R4GMW8 1640 aa35.77■■■■□ 3.32
ABCF2-203ENST00000441774 ABCA10Q8WWZ4 1543 aa35.77■■■■□ 3.32
ABCF2-203ENST00000441774 CHD1O14646 1710 aa35.76■■■■□ 3.31
ABCF2-203ENST00000441774 GRIN2BQ13224 1484 aa35.73■■■■□ 3.31
ABCF2-203ENST00000441774 SNAPC4Q5SXM2 1469 aa35.73■■■■□ 3.31
ABCF2-203ENST00000441774 SYNJ1O43426 1573 aa35.73■■■■□ 3.31
ABCF2-203ENST00000441774 MAGI1Q96QZ7 1491 aaPredicted RBP35.69■■■■□ 3.3
ABCF2-203ENST00000441774 GAPVD1Q14C86 1478 aa35.68■■■■□ 3.3
ABCF2-203ENST00000441774 ABCA5Q8WWZ7 1642 aa35.65■■■■□ 3.3
ABCF2-203ENST00000441774 FBLN2P98095 1184 aa35.65■■■■□ 3.3
ABCF2-203ENST00000441774 PBRM1Q86U86 1689 aa35.61■■■■□ 3.29
ABCF2-203ENST00000441774 TRIM41Q8WV44 630 aa35.59■■■■□ 3.29
ABCF2-203ENST00000441774 RIMBP3CA6NJZ7 1639 aa35.56■■■■□ 3.28
ABCF2-203ENST00000441774 RIMBP3BA6NNM3 1639 aa35.56■■■■□ 3.28
ABCF2-203ENST00000441774 RIMBP3Q9UFD9 1639 aa35.56■■■■□ 3.28
ABCF2-203ENST00000441774 SYNJ2O15056 1496 aa35.55■■■■□ 3.28
ABCF2-203ENST00000441774 ARHGEF11O15085 1522 aa35.53■■■■□ 3.28
ABCF2-203ENST00000441774 CHMP7Q8WUX9 453 aaPredicted RBP35.53■■■■□ 3.28
ABCF2-203ENST00000441774 CLASP1Q7Z460 1538 aa35.42■■■■□ 3.26
ABCF2-203ENST00000441774 ADAMTS12P58397 1594 aa35.34■■■■□ 3.25
ABCF2-203ENST00000441774 ERICH3Q5RHP9 1530 aa35.33■■■■□ 3.25
ABCF2-203ENST00000441774 GRIN2AQ12879 1464 aa35.28■■■■□ 3.24
ABCF2-203ENST00000441774 FHAD1B1AJZ9 1412 aa35.27■■■■□ 3.24
ABCF2-203ENST00000441774 ARAP1Q96P48 1450 aa35.22■■■■□ 3.23
ABCF2-203ENST00000441774 CYB5RLQ6IPT4 315 aa35.17■■■■□ 3.22
ABCF2-203ENST00000441774 NUP160Q12769 1436 aa35.16■■■■□ 3.22
ABCF2-203ENST00000441774 CEP170Q5SW79 1584 aa35.12■■■■□ 3.21
ABCF2-203ENST00000441774 KIF27Q86VH2 1401 aa35.08■■■■□ 3.21
ABCF2-203ENST00000441774 IGF1RP08069 1367 aa35■■■■□ 3.19
ABCF2-203ENST00000441774 SHROOM2Q13796 1616 aa34.93■■■■□ 3.18
ABCF2-203ENST00000441774 CUL7Q14999 1698 aa34.92■■■■□ 3.18
ABCF2-203ENST00000441774 ERCC6L2Q5T890 1561 aa34.87■■■■□ 3.17
ABCF2-203ENST00000441774 RUSC2Q8N2Y8 1516 aa34.82■■■■□ 3.16
ABCF2-203ENST00000441774 CARMIL1Q5VZK9 1371 aa34.77■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms