RNA–Protein interactions for RNA: ENST00000495406.1

CDK5RAP2-219, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 2

Gene CDK5RAP2, Length 635 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-219ENST00000495406 NISCHQ9Y2I1 1504 aa26.69■■□□□ 1.86
CDK5RAP2-219ENST00000495406 ABCC9O60706 1549 aa24.39■■□□□ 1.49
CDK5RAP2-219ENST00000495406 CCDC180Q9P1Z9 1646 aa24.03■■□□□ 1.44
CDK5RAP2-219ENST00000495406 DNAJC5BQ9UF47 199 aa23.11■■□□□ 1.29
CDK5RAP2-219ENST00000495406 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
CDK5RAP2-219ENST00000495406 DCAF8L2P0C7V8 631 aa22.87■■□□□ 1.25
CDK5RAP2-219ENST00000495406 NACADO15069 1562 aa22.81■■□□□ 1.24
CDK5RAP2-219ENST00000495406 PABPN1Q86U42 306 aaKnown RBP eCLIP22.72■■□□□ 1.23
CDK5RAP2-219ENST00000495406 UNC13AQ9UPW8 1703 aa22.51■■□□□ 1.19
CDK5RAP2-219ENST00000495406 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
CDK5RAP2-219ENST00000495406 BICRAQ9NZM4 1560 aa22.34■■□□□ 1.17
CDK5RAP2-219ENST00000495406 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
CDK5RAP2-219ENST00000495406 SHROOM4Q9ULL8 1493 aa22■■□□□ 1.11
CDK5RAP2-219ENST00000495406 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
CDK5RAP2-219ENST00000495406 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
CDK5RAP2-219ENST00000495406 CC2D2AQ9P2K1 1620 aa21.98■■□□□ 1.11
CDK5RAP2-219ENST00000495406 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
CDK5RAP2-219ENST00000495406 EIF4G1Q04637 1599 aaKnown RBP21.85■■□□□ 1.09
CDK5RAP2-219ENST00000495406 DNAJC5Q9H3Z4 198 aa21.44■■□□□ 1.02
CDK5RAP2-219ENST00000495406 ERCC6Q03468 1493 aa21.11■□□□□ 0.97
CDK5RAP2-219ENST00000495406 CUX2O14529 1486 aa21.08■□□□□ 0.97
CDK5RAP2-219ENST00000495406 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
CDK5RAP2-219ENST00000495406 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
CDK5RAP2-219ENST00000495406 SMARCA2P51531 1590 aa20.9■□□□□ 0.94
CDK5RAP2-219ENST00000495406 SMARCA4P51532 1647 aa20.87■□□□□ 0.93
CDK5RAP2-219ENST00000495406 HMGXB3Q12766 1538 aa20.86■□□□□ 0.93
CDK5RAP2-219ENST00000495406 NESP48681 1621 aa20.86■□□□□ 0.93
CDK5RAP2-219ENST00000495406 BAZ1BQ9UIG0 1483 aaKnown RBP20.79■□□□□ 0.92
CDK5RAP2-219ENST00000495406 BAZ1AQ9NRL2 1556 aaPredicted RBP20.75■□□□□ 0.91
CDK5RAP2-219ENST00000495406 LAMC3Q9Y6N6 1575 aa20.64■□□□□ 0.9
CDK5RAP2-219ENST00000495406 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
CDK5RAP2-219ENST00000495406 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
CDK5RAP2-219ENST00000495406 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.88
CDK5RAP2-219ENST00000495406 MROH2BQ7Z745 1585 aa20.58■□□□□ 0.88
CDK5RAP2-219ENST00000495406 KIF21AQ7Z4S6 1674 aa20.56■□□□□ 0.88
CDK5RAP2-219ENST00000495406 TRIM41Q8WV44 630 aa20.48■□□□□ 0.87
CDK5RAP2-219ENST00000495406 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
CDK5RAP2-219ENST00000495406 MRC2Q9UBG0 1479 aa20.38■□□□□ 0.85
CDK5RAP2-219ENST00000495406 WIZO95785 1651 aa20.33■□□□□ 0.85
CDK5RAP2-219ENST00000495406 WDR62O43379 1518 aa20.3■□□□□ 0.84
CDK5RAP2-219ENST00000495406 CEP164Q9UPV0 1460 aa20.26■□□□□ 0.83
CDK5RAP2-219ENST00000495406 FANCD2Q9BXW9 1451 aa20.22■□□□□ 0.83
CDK5RAP2-219ENST00000495406 OSCARQ8IYS5 282 aa20.19■□□□□ 0.82
CDK5RAP2-219ENST00000495406 CFTRP13569 1480 aa20.13■□□□□ 0.81
CDK5RAP2-219ENST00000495406 RSF1Q96T23 1441 aaPredicted RBP20.06■□□□□ 0.8
CDK5RAP2-219ENST00000495406 URB2Q14146 1524 aaKnown RBP20.04■□□□□ 0.8
CDK5RAP2-219ENST00000495406 TOP2AP11388 1531 aaKnown RBP20.02■□□□□ 0.79
CDK5RAP2-219ENST00000495406 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
CDK5RAP2-219ENST00000495406 RIMBP3CA6NJZ7 1639 aa19.86■□□□□ 0.77
CDK5RAP2-219ENST00000495406 RIMBP3BA6NNM3 1639 aa19.86■□□□□ 0.77
CDK5RAP2-219ENST00000495406 RIMBP3Q9UFD9 1639 aa19.86■□□□□ 0.77
CDK5RAP2-219ENST00000495406 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
CDK5RAP2-219ENST00000495406 IFT140Q96RY7 1462 aa19.86■□□□□ 0.77
CDK5RAP2-219ENST00000495406 CCDC88BA6NC98 1476 aa19.84■□□□□ 0.77
CDK5RAP2-219ENST00000495406 TOPBP1Q92547 1522 aa19.78■□□□□ 0.76
CDK5RAP2-219ENST00000495406 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
CDK5RAP2-219ENST00000495406 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
CDK5RAP2-219ENST00000495406 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
CDK5RAP2-219ENST00000495406 FBLN2P98095 1184 aa19.72■□□□□ 0.75
CDK5RAP2-219ENST00000495406 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
CDK5RAP2-219ENST00000495406 DNMBPQ6XZF7 1577 aa19.68■□□□□ 0.74
CDK5RAP2-219ENST00000495406 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.745e-8■□□□□ 8.9
CDK5RAP2-219ENST00000495406 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP2-219ENST00000495406 CHD1O14646 1710 aa19.63■□□□□ 0.73
CDK5RAP2-219ENST00000495406 TARBP1Q13395 1621 aaKnown RBP19.61■□□□□ 0.73
CDK5RAP2-219ENST00000495406 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP2-219ENST00000495406 TDRD9Q8NDG6 1382 aaKnown RBP19.54■□□□□ 0.72
CDK5RAP2-219ENST00000495406 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
CDK5RAP2-219ENST00000495406 SOGA1O94964 1423 aa19.53■□□□□ 0.72
CDK5RAP2-219ENST00000495406 RAD54L2Q9Y4B4 1467 aa19.53■□□□□ 0.72
CDK5RAP2-219ENST00000495406 CHMP7Q8WUX9 453 aaPredicted RBP19.49■□□□□ 0.71
CDK5RAP2-219ENST00000495406 SNAPC4Q5SXM2 1469 aa19.43■□□□□ 0.7
CDK5RAP2-219ENST00000495406 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
CDK5RAP2-219ENST00000495406 SYNJ1O43426 1573 aa19.37■□□□□ 0.69
CDK5RAP2-219ENST00000495406 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
CDK5RAP2-219ENST00000495406 CLASP1Q7Z460 1538 aa19.35■□□□□ 0.69
CDK5RAP2-219ENST00000495406 GRIN2BQ13224 1484 aa19.35■□□□□ 0.69
CDK5RAP2-219ENST00000495406 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
CDK5RAP2-219ENST00000495406 CUX1P39880 1505 aa19.34■□□□□ 0.69
CDK5RAP2-219ENST00000495406 SYNJ2O15056 1496 aa19.31■□□□□ 0.68
CDK5RAP2-219ENST00000495406 AEBP2Q6ZN18 517 aaPredicted RBP19.31■□□□□ 0.68
CDK5RAP2-219ENST00000495406 GAPVD1Q14C86 1478 aa19.27■□□□□ 0.67
CDK5RAP2-219ENST00000495406 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
CDK5RAP2-219ENST00000495406 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
CDK5RAP2-219ENST00000495406 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
CDK5RAP2-219ENST00000495406 ABCA5Q8WWZ7 1642 aa19.13■□□□□ 0.65
CDK5RAP2-219ENST00000495406 GRIN2AQ12879 1464 aa19.09■□□□□ 0.65
CDK5RAP2-219ENST00000495406 WRNQ14191 1432 aaPredicted RBP eCLIP19.08■□□□□ 0.65
CDK5RAP2-219ENST00000495406 ERCC6L2Q5T890 1561 aa19.06■□□□□ 0.64
CDK5RAP2-219ENST00000495406 CEP170Q5SW79 1584 aa19.03■□□□□ 0.64
CDK5RAP2-219ENST00000495406 ADAMTS12P58397 1594 aa19.01■□□□□ 0.63
CDK5RAP2-219ENST00000495406 NUP160Q12769 1436 aa19■□□□□ 0.63
CDK5RAP2-219ENST00000495406 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
CDK5RAP2-219ENST00000495406 TOP2BQ02880 1626 aa18.96■□□□□ 0.63
CDK5RAP2-219ENST00000495406 SHROOM2Q13796 1616 aa18.94■□□□□ 0.62
CDK5RAP2-219ENST00000495406 BIVM-ERCC5R4GMW8 1640 aa18.94■□□□□ 0.62
CDK5RAP2-219ENST00000495406 PRG4Q92954 1404 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP2-219ENST00000495406 ERICH3Q5RHP9 1530 aa18.92■□□□□ 0.62
CDK5RAP2-219ENST00000495406 JPH4Q96JJ6 628 aa18.92■□□□□ 0.62
CDK5RAP2-219ENST00000495406 NPM1P06748 294 aaKnown RBP eCLIP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms