RNA–Protein interactions for RNA: ENST00000495406.1

CDK5RAP2-219, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 2

Gene CDK5RAP2, Length 635 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-219ENST00000495406 NISCHQ9Y2I1 1504 aa26.69■■□□□ 1.86
CDK5RAP2-219ENST00000495406 ABCC9O60706 1549 aa24.39■■□□□ 1.49
CDK5RAP2-219ENST00000495406 CCDC180Q9P1Z9 1646 aa24.03■■□□□ 1.44
CDK5RAP2-219ENST00000495406 DNAJC5BQ9UF47 199 aa23.11■■□□□ 1.29
CDK5RAP2-219ENST00000495406 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
CDK5RAP2-219ENST00000495406 DCAF8L2P0C7V8 631 aa22.87■■□□□ 1.25
CDK5RAP2-219ENST00000495406 NACADO15069 1562 aa22.81■■□□□ 1.24
CDK5RAP2-219ENST00000495406 PABPN1Q86U42 306 aaKnown RBP eCLIP22.72■■□□□ 1.23
CDK5RAP2-219ENST00000495406 UNC13AQ9UPW8 1703 aa22.51■■□□□ 1.19
CDK5RAP2-219ENST00000495406 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
CDK5RAP2-219ENST00000495406 BICRAQ9NZM4 1560 aa22.34■■□□□ 1.17
CDK5RAP2-219ENST00000495406 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
CDK5RAP2-219ENST00000495406 SHROOM4Q9ULL8 1493 aa22■■□□□ 1.11
CDK5RAP2-219ENST00000495406 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
CDK5RAP2-219ENST00000495406 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
CDK5RAP2-219ENST00000495406 CC2D2AQ9P2K1 1620 aa21.98■■□□□ 1.11
CDK5RAP2-219ENST00000495406 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
CDK5RAP2-219ENST00000495406 EIF4G1Q04637 1599 aaKnown RBP21.85■■□□□ 1.09
CDK5RAP2-219ENST00000495406 DNAJC5Q9H3Z4 198 aa21.44■■□□□ 1.02
CDK5RAP2-219ENST00000495406 ERCC6Q03468 1493 aa21.11■□□□□ 0.97
CDK5RAP2-219ENST00000495406 CUX2O14529 1486 aa21.08■□□□□ 0.97
CDK5RAP2-219ENST00000495406 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
CDK5RAP2-219ENST00000495406 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
CDK5RAP2-219ENST00000495406 SMARCA2P51531 1590 aa20.9■□□□□ 0.94
CDK5RAP2-219ENST00000495406 SMARCA4P51532 1647 aa20.87■□□□□ 0.93
CDK5RAP2-219ENST00000495406 HMGXB3Q12766 1538 aa20.86■□□□□ 0.93
CDK5RAP2-219ENST00000495406 NESP48681 1621 aa20.86■□□□□ 0.93
CDK5RAP2-219ENST00000495406 BAZ1BQ9UIG0 1483 aaKnown RBP20.79■□□□□ 0.92
CDK5RAP2-219ENST00000495406 BAZ1AQ9NRL2 1556 aaPredicted RBP20.75■□□□□ 0.91
CDK5RAP2-219ENST00000495406 LAMC3Q9Y6N6 1575 aa20.64■□□□□ 0.9
CDK5RAP2-219ENST00000495406 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
CDK5RAP2-219ENST00000495406 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
CDK5RAP2-219ENST00000495406 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.88
CDK5RAP2-219ENST00000495406 MROH2BQ7Z745 1585 aa20.58■□□□□ 0.88
CDK5RAP2-219ENST00000495406 KIF21AQ7Z4S6 1674 aa20.56■□□□□ 0.88
CDK5RAP2-219ENST00000495406 TRIM41Q8WV44 630 aa20.48■□□□□ 0.87
CDK5RAP2-219ENST00000495406 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
CDK5RAP2-219ENST00000495406 MRC2Q9UBG0 1479 aa20.38■□□□□ 0.85
CDK5RAP2-219ENST00000495406 WIZO95785 1651 aa20.33■□□□□ 0.85
CDK5RAP2-219ENST00000495406 WDR62O43379 1518 aa20.3■□□□□ 0.84
CDK5RAP2-219ENST00000495406 CEP164Q9UPV0 1460 aa20.26■□□□□ 0.83
CDK5RAP2-219ENST00000495406 FANCD2Q9BXW9 1451 aa20.22■□□□□ 0.83
CDK5RAP2-219ENST00000495406 OSCARQ8IYS5 282 aa20.19■□□□□ 0.82
CDK5RAP2-219ENST00000495406 CFTRP13569 1480 aa20.13■□□□□ 0.81
CDK5RAP2-219ENST00000495406 RSF1Q96T23 1441 aaPredicted RBP20.06■□□□□ 0.8
CDK5RAP2-219ENST00000495406 URB2Q14146 1524 aaKnown RBP20.04■□□□□ 0.8
CDK5RAP2-219ENST00000495406 TOP2AP11388 1531 aaKnown RBP20.02■□□□□ 0.79
CDK5RAP2-219ENST00000495406 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
CDK5RAP2-219ENST00000495406 RIMBP3CA6NJZ7 1639 aa19.86■□□□□ 0.77
CDK5RAP2-219ENST00000495406 RIMBP3BA6NNM3 1639 aa19.86■□□□□ 0.77
CDK5RAP2-219ENST00000495406 RIMBP3Q9UFD9 1639 aa19.86■□□□□ 0.77
CDK5RAP2-219ENST00000495406 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
CDK5RAP2-219ENST00000495406 IFT140Q96RY7 1462 aa19.86■□□□□ 0.77
CDK5RAP2-219ENST00000495406 CCDC88BA6NC98 1476 aa19.84■□□□□ 0.77
CDK5RAP2-219ENST00000495406 TOPBP1Q92547 1522 aa19.78■□□□□ 0.76
CDK5RAP2-219ENST00000495406 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
CDK5RAP2-219ENST00000495406 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
CDK5RAP2-219ENST00000495406 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
CDK5RAP2-219ENST00000495406 FBLN2P98095 1184 aa19.72■□□□□ 0.75
CDK5RAP2-219ENST00000495406 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
CDK5RAP2-219ENST00000495406 DNMBPQ6XZF7 1577 aa19.68■□□□□ 0.74
CDK5RAP2-219ENST00000495406 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.745e-8■□□□□ 8.9
CDK5RAP2-219ENST00000495406 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP2-219ENST00000495406 CHD1O14646 1710 aa19.63■□□□□ 0.73
CDK5RAP2-219ENST00000495406 TARBP1Q13395 1621 aaKnown RBP19.61■□□□□ 0.73
CDK5RAP2-219ENST00000495406 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP2-219ENST00000495406 TDRD9Q8NDG6 1382 aaKnown RBP19.54■□□□□ 0.72
CDK5RAP2-219ENST00000495406 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
CDK5RAP2-219ENST00000495406 SOGA1O94964 1423 aa19.53■□□□□ 0.72
CDK5RAP2-219ENST00000495406 RAD54L2Q9Y4B4 1467 aa19.53■□□□□ 0.72
CDK5RAP2-219ENST00000495406 CHMP7Q8WUX9 453 aaPredicted RBP19.49■□□□□ 0.71
CDK5RAP2-219ENST00000495406 SNAPC4Q5SXM2 1469 aa19.43■□□□□ 0.7
CDK5RAP2-219ENST00000495406 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
CDK5RAP2-219ENST00000495406 SYNJ1O43426 1573 aa19.37■□□□□ 0.69
CDK5RAP2-219ENST00000495406 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
CDK5RAP2-219ENST00000495406 CLASP1Q7Z460 1538 aa19.35■□□□□ 0.69
CDK5RAP2-219ENST00000495406 GRIN2BQ13224 1484 aa19.35■□□□□ 0.69
CDK5RAP2-219ENST00000495406 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
CDK5RAP2-219ENST00000495406 CUX1P39880 1505 aa19.34■□□□□ 0.69
CDK5RAP2-219ENST00000495406 SYNJ2O15056 1496 aa19.31■□□□□ 0.68
CDK5RAP2-219ENST00000495406 AEBP2Q6ZN18 517 aaPredicted RBP19.31■□□□□ 0.68
CDK5RAP2-219ENST00000495406 GAPVD1Q14C86 1478 aa19.27■□□□□ 0.67
CDK5RAP2-219ENST00000495406 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
CDK5RAP2-219ENST00000495406 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
CDK5RAP2-219ENST00000495406 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
CDK5RAP2-219ENST00000495406 ABCA5Q8WWZ7 1642 aa19.13■□□□□ 0.65
CDK5RAP2-219ENST00000495406 GRIN2AQ12879 1464 aa19.09■□□□□ 0.65
CDK5RAP2-219ENST00000495406 WRNQ14191 1432 aaPredicted RBP eCLIP19.08■□□□□ 0.65
CDK5RAP2-219ENST00000495406 ERCC6L2Q5T890 1561 aa19.06■□□□□ 0.64
CDK5RAP2-219ENST00000495406 CEP170Q5SW79 1584 aa19.03■□□□□ 0.64
CDK5RAP2-219ENST00000495406 ADAMTS12P58397 1594 aa19.01■□□□□ 0.63
CDK5RAP2-219ENST00000495406 NUP160Q12769 1436 aa19■□□□□ 0.63
CDK5RAP2-219ENST00000495406 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
CDK5RAP2-219ENST00000495406 TOP2BQ02880 1626 aa18.96■□□□□ 0.63
CDK5RAP2-219ENST00000495406 SHROOM2Q13796 1616 aa18.94■□□□□ 0.62
CDK5RAP2-219ENST00000495406 BIVM-ERCC5R4GMW8 1640 aa18.94■□□□□ 0.62
CDK5RAP2-219ENST00000495406 PRG4Q92954 1404 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP2-219ENST00000495406 ERICH3Q5RHP9 1530 aa18.92■□□□□ 0.62
CDK5RAP2-219ENST00000495406 JPH4Q96JJ6 628 aa18.92■□□□□ 0.62
CDK5RAP2-219ENST00000495406 NPM1P06748 294 aaKnown RBP eCLIP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms