RNA–Protein interactions for RNA: ENST00000509647.1

FAT1-208, Transcript of FAT atypical cadherin 1, humanhuman

TSL 1 (best)

Gene FAT1, Length 1,852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAT1-208ENST00000509647 NISCHQ9Y2I1 1504 aa37.49■■■■□ 3.59
FAT1-208ENST00000509647 CCDC180Q9P1Z9 1646 aa33.06■■■□□ 2.88
FAT1-208ENST00000509647 ABCC9O60706 1549 aa32.29■■■□□ 2.76
FAT1-208ENST00000509647 DCAF8L2P0C7V8 631 aa31.35■■■□□ 2.61
FAT1-208ENST00000509647 ZCCHC6Q5VYS8 1495 aaKnown RBP31.26■■■□□ 2.59
FAT1-208ENST00000509647 NACADO15069 1562 aa31.07■■■□□ 2.56
FAT1-208ENST00000509647 RB1CC1Q8TDY2 1594 aa31.02■■■□□ 2.56
FAT1-208ENST00000509647 MYO15BQ96JP2 1530 aa30.96■■■□□ 2.55
FAT1-208ENST00000509647 DCAF1Q9Y4B6 1507 aa30.94■■■□□ 2.54
FAT1-208ENST00000509647 UNC13AQ9UPW8 1703 aa30.42■■■□□ 2.46
FAT1-208ENST00000509647 SCRIBQ14160 1630 aa30.32■■■□□ 2.44
FAT1-208ENST00000509647 PABPN1Q86U42 306 aaKnown RBP eCLIP30.31■■■□□ 2.44
FAT1-208ENST00000509647 BICRAQ9NZM4 1560 aa30.22■■■□□ 2.43
FAT1-208ENST00000509647 SHROOM4Q9ULL8 1493 aa29.91■■■□□ 2.38
FAT1-208ENST00000509647 DNAJC5BQ9UF47 199 aa29.58■■■□□ 2.33
FAT1-208ENST00000509647 EIF4G1Q04637 1599 aaKnown RBP29.34■■■□□ 2.29
FAT1-208ENST00000509647 CECR2Q9BXF3 1484 aa29.29■■■□□ 2.28
FAT1-208ENST00000509647 CC2D2AQ9P2K1 1620 aa29.17■■■□□ 2.26
FAT1-208ENST00000509647 SMARCA4P51532 1647 aa29■■■□□ 2.23
FAT1-208ENST00000509647 BAZ1AQ9NRL2 1556 aaPredicted RBP28.97■■■□□ 2.23
FAT1-208ENST00000509647 MROH2BQ7Z745 1585 aa28.96■■■□□ 2.23
FAT1-208ENST00000509647 ATAD2BQ9ULI0 1458 aa28.83■■■□□ 2.21
FAT1-208ENST00000509647 NCAPD3P42695 1498 aa28.75■■■□□ 2.19
FAT1-208ENST00000509647 RSF1Q96T23 1441 aaPredicted RBP28.74■■■□□ 2.19
FAT1-208ENST00000509647 SMARCA2P51531 1590 aa28.7■■■□□ 2.18
FAT1-208ENST00000509647 PEG3Q9GZU2 1588 aa28.69■■■□□ 2.18
FAT1-208ENST00000509647 WIZO95785 1651 aa28.64■■■□□ 2.18
FAT1-208ENST00000509647 HMGXB3Q12766 1538 aa28.55■■■□□ 2.16
FAT1-208ENST00000509647 BAZ1BQ9UIG0 1483 aaKnown RBP28.54■■■□□ 2.16
FAT1-208ENST00000509647 SUPT5HO00267 1087 aaKnown RBP28.29■■■□□ 2.12
FAT1-208ENST00000509647 TOP2AP11388 1531 aaKnown RBP28.26■■■□□ 2.11
FAT1-208ENST00000509647 NESP48681 1621 aa28.06■■■□□ 2.08
FAT1-208ENST00000509647 CCDC88BA6NC98 1476 aa28.04■■■□□ 2.08
FAT1-208ENST00000509647 CADPSQ9ULU8 1353 aa27.95■■■□□ 2.06
FAT1-208ENST00000509647 LAMC3Q9Y6N6 1575 aa27.87■■■□□ 2.05
FAT1-208ENST00000509647 CFTRP13569 1480 aa27.82■■■□□ 2.04
FAT1-208ENST00000509647 ERCC6Q03468 1493 aa27.7■■■□□ 2.03
FAT1-208ENST00000509647 PDS5BQ9NTI5 1447 aa27.7■■■□□ 2.02
FAT1-208ENST00000509647 KIF21AQ7Z4S6 1674 aa27.64■■■□□ 2.01
FAT1-208ENST00000509647 FANCD2Q9BXW9 1451 aa27.6■■■□□ 2.01
FAT1-208ENST00000509647 PRDM2Q13029 1718 aa27.49■■□□□ 1.99
FAT1-208ENST00000509647 CEP164Q9UPV0 1460 aa27.49■■□□□ 1.99
FAT1-208ENST00000509647 THOC2Q8NI27 1593 aaKnown RBP27.45■■□□□ 1.98
FAT1-208ENST00000509647 MRC2Q9UBG0 1479 aa27.39■■□□□ 1.98
FAT1-208ENST00000509647 URB2Q14146 1524 aaKnown RBP27.35■■□□□ 1.97
FAT1-208ENST00000509647 WDR62O43379 1518 aa27.29■■□□□ 1.96
FAT1-208ENST00000509647 CUX2O14529 1486 aa27.27■■□□□ 1.96
FAT1-208ENST00000509647 TOPBP1Q92547 1522 aa27.19■■□□□ 1.94
FAT1-208ENST00000509647 DNMBPQ6XZF7 1577 aa27.12■■□□□ 1.93
FAT1-208ENST00000509647 CUX1P39880 1505 aa27.12■■□□□ 1.93
FAT1-208ENST00000509647 ABCC8Q09428 1581 aa27.11■■□□□ 1.93
FAT1-208ENST00000509647 WRNQ14191 1432 aaPredicted RBP eCLIP27.02■■□□□ 1.92
FAT1-208ENST00000509647 POLA1P09884 1462 aaPredicted RBP27■■□□□ 1.91
FAT1-208ENST00000509647 SYNJ1O43426 1573 aa26.96■■□□□ 1.91
FAT1-208ENST00000509647 FGD5Q6ZNL6 1462 aa26.96■■□□□ 1.91
FAT1-208ENST00000509647 RAD54L2Q9Y4B4 1467 aa26.94■■□□□ 1.9
FAT1-208ENST00000509647 SOGA1O94964 1423 aa26.9■■□□□ 1.9
FAT1-208ENST00000509647 IFT140Q96RY7 1462 aa26.9■■□□□ 1.9
FAT1-208ENST00000509647 TOP2BQ02880 1626 aa26.9■■□□□ 1.9
FAT1-208ENST00000509647 ZNF608Q9ULD9 1512 aaPredicted RBP26.88■■□□□ 1.89
FAT1-208ENST00000509647 TARBP1Q13395 1621 aaKnown RBP26.88■■□□□ 1.89
FAT1-208ENST00000509647 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
FAT1-208ENST00000509647 TDRD9Q8NDG6 1382 aaKnown RBP26.79■■□□□ 1.88
FAT1-208ENST00000509647 AQRO60306 1485 aaKnown RBP eCLIP26.78■■□□□ 1.88
FAT1-208ENST00000509647 ABCA10Q8WWZ4 1543 aa26.69■■□□□ 1.86
FAT1-208ENST00000509647 EIF4G3O43432 1585 aaKnown RBP26.67■■□□□ 1.86
FAT1-208ENST00000509647 WDR97A6NE52 1622 aa26.66■■□□□ 1.86
FAT1-208ENST00000509647 TRIM41Q8WV44 630 aa26.64■■□□□ 1.86
FAT1-208ENST00000509647 CHIC1Q5VXU3 224 aa26.58■■□□□ 1.85
FAT1-208ENST00000509647 GAPVD1Q14C86 1478 aa26.57■■□□□ 1.84
FAT1-208ENST00000509647 ABCA5Q8WWZ7 1642 aa26.53■■□□□ 1.84
FAT1-208ENST00000509647 GRIN2BQ13224 1484 aa26.49■■□□□ 1.83
FAT1-208ENST00000509647 SNAPC4Q5SXM2 1469 aa26.45■■□□□ 1.82
FAT1-208ENST00000509647 RUSC2Q8N2Y8 1516 aa26.43■■□□□ 1.82
FAT1-208ENST00000509647 PBRM1Q86U86 1689 aa26.42■■□□□ 1.82
FAT1-208ENST00000509647 KIF27Q86VH2 1401 aa26.41■■□□□ 1.82
FAT1-208ENST00000509647 FBLN2P98095 1184 aa26.4■■□□□ 1.82
FAT1-208ENST00000509647 IGF1RP08069 1367 aa26.38■■□□□ 1.81
FAT1-208ENST00000509647 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
FAT1-208ENST00000509647 ERICH3Q5RHP9 1530 aa26.33■■□□□ 1.81
FAT1-208ENST00000509647 OSCARQ8IYS5 282 aa26.33■■□□□ 1.81
FAT1-208ENST00000509647 CHMP7Q8WUX9 453 aaPredicted RBP26.33■■□□□ 1.81
FAT1-208ENST00000509647 SYNJ2O15056 1496 aa26.29■■□□□ 1.8
FAT1-208ENST00000509647 CHD1O14646 1710 aa26.29■■□□□ 1.8
FAT1-208ENST00000509647 DNAJC5Q9H3Z4 198 aa26.29■■□□□ 1.8
FAT1-208ENST00000509647 FHAD1B1AJZ9 1412 aa26.25■■□□□ 1.79
FAT1-208ENST00000509647 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
FAT1-208ENST00000509647 CARMIL1Q5VZK9 1371 aa26.18■■□□□ 1.78
FAT1-208ENST00000509647 FAM9AQ8IZU1 332 aaPredicted RBP26.17■■□□□ 1.78
FAT1-208ENST00000509647 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
FAT1-208ENST00000509647 CSRNP3Q8WYN3 585 aa26.11■■□□□ 1.77
FAT1-208ENST00000509647 CUL7Q14999 1698 aa26.1■■□□□ 1.77
FAT1-208ENST00000509647 NUP160Q12769 1436 aa26.05■■□□□ 1.76
FAT1-208ENST00000509647 CEP170Q5SW79 1584 aa26.05■■□□□ 1.76
FAT1-208ENST00000509647 PRXQ9BXM0 1461 aa26.02■■□□□ 1.76
FAT1-208ENST00000509647 EEA1Q15075 1411 aa26.02■■□□□ 1.76
FAT1-208ENST00000509647 CLASP1Q7Z460 1538 aa26.02■■□□□ 1.76
FAT1-208ENST00000509647 RAPGEF2Q9Y4G8 1499 aa26■■□□□ 1.75
FAT1-208ENST00000509647 JPH4Q96JJ6 628 aa25.88■■□□□ 1.73
FAT1-208ENST00000509647 KIAA0586Q9BVV6 1533 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms