RNA–Protein interactions for RNA: ENST00000591303.2

PCSK4-211, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-211ENST00000591303 NISCHQ9Y2I1 1504 aa50.11■■■■■ 5.61
PCSK4-211ENST00000591303 ABCC9O60706 1549 aa46.36■■■■■ 5.01
PCSK4-211ENST00000591303 CCDC180Q9P1Z9 1646 aa45.39■■■■■ 4.86
PCSK4-211ENST00000591303 DNAJC5BQ9UF47 199 aa44.47■■■■■ 4.71
PCSK4-211ENST00000591303 RB1CC1Q8TDY2 1594 aa43.64■■■■■ 4.58
PCSK4-211ENST00000591303 NACADO15069 1562 aa43.11■■■■■ 4.49
PCSK4-211ENST00000591303 PABPN1Q86U42 306 aaKnown RBP eCLIP42.99■■■■■ 4.47
PCSK4-211ENST00000591303 UNC13AQ9UPW8 1703 aa42.84■■■■■ 4.45
PCSK4-211ENST00000591303 DCAF8L2P0C7V8 631 aa42.58■■■■■ 4.41
PCSK4-211ENST00000591303 BICRAQ9NZM4 1560 aa42.56■■■■■ 4.4
PCSK4-211ENST00000591303 MYO15BQ96JP2 1530 aa42.19■■■■■ 4.34
PCSK4-211ENST00000591303 CC2D2AQ9P2K1 1620 aa41.86■■■■■ 4.29
PCSK4-211ENST00000591303 CECR2Q9BXF3 1484 aa41.84■■■■■ 4.29
PCSK4-211ENST00000591303 SHROOM4Q9ULL8 1493 aa41.71■■■■■ 4.27
PCSK4-211ENST00000591303 EIF4G1Q04637 1599 aaKnown RBP41.52■■■■■ 4.24
PCSK4-211ENST00000591303 DNAJC5Q9H3Z4 198 aa41.45■■■■■ 4.23
PCSK4-211ENST00000591303 ZCCHC6Q5VYS8 1495 aaKnown RBP41.33■■■■■ 4.21
PCSK4-211ENST00000591303 SCRIBQ14160 1630 aa41.32■■■■■ 4.2
PCSK4-211ENST00000591303 DCAF1Q9Y4B6 1507 aa41.3■■■■■ 4.2
PCSK4-211ENST00000591303 CUX2O14529 1486 aa40.32■■■■■ 4.04
PCSK4-211ENST00000591303 ERCC6Q03468 1493 aa40■■■■□ 3.99
PCSK4-211ENST00000591303 NCAPD3P42695 1498 aa39.83■■■■□ 3.97
PCSK4-211ENST00000591303 NESP48681 1621 aa39.61■■■■□ 3.93
PCSK4-211ENST00000591303 ATAD2BQ9ULI0 1458 aa39.59■■■■□ 3.93
PCSK4-211ENST00000591303 HMGXB3Q12766 1538 aa39.45■■■■□ 3.91
PCSK4-211ENST00000591303 THOC2Q8NI27 1593 aaKnown RBP39.41■■■■□ 3.9
PCSK4-211ENST00000591303 SMARCA2P51531 1590 aa39.36■■■■□ 3.89
PCSK4-211ENST00000591303 SMARCA4P51532 1647 aa39.32■■■■□ 3.88
PCSK4-211ENST00000591303 TRIM41Q8WV44 630 aa39.17■■■■□ 3.86
PCSK4-211ENST00000591303 BAZ1BQ9UIG0 1483 aaKnown RBP39.1■■■■□ 3.85
PCSK4-211ENST00000591303 LAMC3Q9Y6N6 1575 aa39.08■■■■□ 3.85
PCSK4-211ENST00000591303 KIF21AQ7Z4S6 1674 aa39.07■■■■□ 3.85
PCSK4-211ENST00000591303 PEG3Q9GZU2 1588 aa38.95■■■■□ 3.83
PCSK4-211ENST00000591303 BAZ1AQ9NRL2 1556 aaPredicted RBP38.91■■■■□ 3.82
PCSK4-211ENST00000591303 PDS5BQ9NTI5 1447 aa38.81■■■■□ 3.8
PCSK4-211ENST00000591303 MROH2BQ7Z745 1585 aa38.65■■■■□ 3.78
PCSK4-211ENST00000591303 MRC2Q9UBG0 1479 aa38.6■■■■□ 3.77
PCSK4-211ENST00000591303 WDR62O43379 1518 aa38.59■■■■□ 3.77
PCSK4-211ENST00000591303 CADPSQ9ULU8 1353 aa38.54■■■■□ 3.76
PCSK4-211ENST00000591303 OSCARQ8IYS5 282 aa38.25■■■■□ 3.71
PCSK4-211ENST00000591303 CEP164Q9UPV0 1460 aa38.24■■■■□ 3.71
PCSK4-211ENST00000591303 WIZO95785 1651 aa38.14■■■■□ 3.7
PCSK4-211ENST00000591303 FANCD2Q9BXW9 1451 aa38.13■■■■□ 3.69
PCSK4-211ENST00000591303 RIMBP3CA6NJZ7 1639 aa38.01■■■■□ 3.68
PCSK4-211ENST00000591303 RIMBP3BA6NNM3 1639 aa38.01■■■■□ 3.68
PCSK4-211ENST00000591303 RIMBP3Q9UFD9 1639 aa38.01■■■■□ 3.68
PCSK4-211ENST00000591303 URB2Q14146 1524 aaKnown RBP37.95■■■■□ 3.67
PCSK4-211ENST00000591303 CFTRP13569 1480 aa37.93■■■■□ 3.66
PCSK4-211ENST00000591303 ARHGEF11O15085 1522 aa37.76■■■■□ 3.63
PCSK4-211ENST00000591303 ZNF608Q9ULD9 1512 aaPredicted RBP37.65■■■■□ 3.62
PCSK4-211ENST00000591303 TOP2AP11388 1531 aaKnown RBP37.52■■■■□ 3.6
PCSK4-211ENST00000591303 PRDM2Q13029 1718 aa37.52■■■■□ 3.6
PCSK4-211ENST00000591303 IFT140Q96RY7 1462 aa37.51■■■■□ 3.59
PCSK4-211ENST00000591303 CYB5RLQ6IPT4 315 aa37.46■■■■□ 3.59
PCSK4-211ENST00000591303 RSF1Q96T23 1441 aaPredicted RBP37.44■■■■□ 3.58
PCSK4-211ENST00000591303 EIF4G3O43432 1585 aaKnown RBP37.38■■■■□ 3.57
PCSK4-211ENST00000591303 ARAP1Q96P48 1450 aa37.34■■■■□ 3.57
PCSK4-211ENST00000591303 TOPBP1Q92547 1522 aa37.32■■■■□ 3.57
PCSK4-211ENST00000591303 CHD1O14646 1710 aa37.31■■■■□ 3.56
PCSK4-211ENST00000591303 TRHP20396 242 aaPredicted RBP37.31■■■■□ 3.56
PCSK4-211ENST00000591303 AQRO60306 1485 aaKnown RBP eCLIP37.13■■■■□ 3.545e-8■■■■□ 21.5
PCSK4-211ENST00000591303 TARBP1Q13395 1621 aaKnown RBP37.13■■■■□ 3.53
PCSK4-211ENST00000591303 CCDC88BA6NC98 1476 aa37.13■■■■□ 3.53
PCSK4-211ENST00000591303 DNMBPQ6XZF7 1577 aa37.08■■■■□ 3.53
PCSK4-211ENST00000591303 ABCC8Q09428 1581 aa37.07■■■■□ 3.52
PCSK4-211ENST00000591303 FBLN2P98095 1184 aa36.97■■■■□ 3.51
PCSK4-211ENST00000591303 AEBP2Q6ZN18 517 aaPredicted RBP36.89■■■■□ 3.5
PCSK4-211ENST00000591303 POLA1P09884 1462 aaPredicted RBP36.88■■■■□ 3.5
PCSK4-211ENST00000591303 CLASP1Q7Z460 1538 aa36.85■■■■□ 3.49
PCSK4-211ENST00000591303 RAD54L2Q9Y4B4 1467 aa36.79■■■■□ 3.48
PCSK4-211ENST00000591303 TDRD9Q8NDG6 1382 aaKnown RBP36.73■■■■□ 3.47
PCSK4-211ENST00000591303 SNAPC4Q5SXM2 1469 aa36.72■■■■□ 3.47
PCSK4-211ENST00000591303 SYNJ1O43426 1573 aa36.63■■■■□ 3.45
PCSK4-211ENST00000591303 SOGA1O94964 1423 aa36.63■■■■□ 3.45
PCSK4-211ENST00000591303 WDR97A6NE52 1622 aa36.56■■■■□ 3.44
PCSK4-211ENST00000591303 CHMP7Q8WUX9 453 aaPredicted RBP36.53■■■■□ 3.44
PCSK4-211ENST00000591303 MAGI1Q96QZ7 1491 aaPredicted RBP36.53■■■■□ 3.44
PCSK4-211ENST00000591303 FGD5Q6ZNL6 1462 aa36.5■■■■□ 3.43
PCSK4-211ENST00000591303 GAPVD1Q14C86 1478 aa36.45■■■■□ 3.43
PCSK4-211ENST00000591303 SYNJ2O15056 1496 aa36.44■■■■□ 3.42
PCSK4-211ENST00000591303 GRIN2BQ13224 1484 aa36.43■■■■□ 3.42
PCSK4-211ENST00000591303 CUX1P39880 1505 aa36.35■■■■□ 3.41
PCSK4-211ENST00000591303 PBRM1Q86U86 1689 aa36.32■■■■□ 3.4
PCSK4-211ENST00000591303 ERCC6L2Q5T890 1561 aa36.26■■■■□ 3.39
PCSK4-211ENST00000591303 ABCA5Q8WWZ7 1642 aa36.11■■■■□ 3.37
PCSK4-211ENST00000591303 KIF13AQ9H1H9 1805 aa36.06■■■■□ 3.36
PCSK4-211ENST00000591303 CEP170Q5SW79 1584 aa36.03■■■■□ 3.36
PCSK4-211ENST00000591303 ABCA10Q8WWZ4 1543 aa36.01■■■■□ 3.36
PCSK4-211ENST00000591303 GRIN2AQ12879 1464 aa36■■■■□ 3.35
PCSK4-211ENST00000591303 SHROOM2Q13796 1616 aa35.94■■■■□ 3.34
PCSK4-211ENST00000591303 NUP160Q12769 1436 aa35.93■■■■□ 3.34
PCSK4-211ENST00000591303 ADAMTS12P58397 1594 aa35.89■■■■□ 3.34
PCSK4-211ENST00000591303 FHAD1B1AJZ9 1412 aa35.66■■■■□ 3.3
PCSK4-211ENST00000591303 ABCC10Q5T3U5 1492 aa35.63■■■■□ 3.29
PCSK4-211ENST00000591303 PRG4Q92954 1404 aaPredicted RBP35.63■■■■□ 3.29
PCSK4-211ENST00000591303 KDM4FA0A1W2PPD8 638 aa35.62■■■■□ 3.29
PCSK4-211ENST00000591303 WRNQ14191 1432 aaPredicted RBP eCLIP35.6■■■■□ 3.29
PCSK4-211ENST00000591303 FAM69CQ0P6D2 419 aa35.58■■■■□ 3.29
PCSK4-211ENST00000591303 DIP2BQ9P265 1576 aa35.57■■■■□ 3.28
PCSK4-211ENST00000591303 MAPKBP1O60336 1514 aa35.53■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms