RNA–Protein interactions for RNA: ENST00000586002.3

PCSK4-203, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-203ENST00000586002 NISCHQ9Y2I1 1504 aa41.7■■■■■ 4.27
PCSK4-203ENST00000586002 CCDC180Q9P1Z9 1646 aa36.84■■■■□ 3.49
PCSK4-203ENST00000586002 ABCC9O60706 1549 aa35.93■■■■□ 3.34
PCSK4-203ENST00000586002 DCAF8L2P0C7V8 631 aa34.94■■■■□ 3.18
PCSK4-203ENST00000586002 ZCCHC6Q5VYS8 1495 aaKnown RBP34.74■■■■□ 3.15
PCSK4-203ENST00000586002 NACADO15069 1562 aa34.68■■■■□ 3.14
PCSK4-203ENST00000586002 RB1CC1Q8TDY2 1594 aa34.64■■■■□ 3.14
PCSK4-203ENST00000586002 MYO15BQ96JP2 1530 aa34.56■■■■□ 3.12
PCSK4-203ENST00000586002 DCAF1Q9Y4B6 1507 aa34.5■■■■□ 3.11
PCSK4-203ENST00000586002 PABPN1Q86U42 306 aaKnown RBP eCLIP33.72■■■□□ 2.99
PCSK4-203ENST00000586002 UNC13AQ9UPW8 1703 aa33.72■■■□□ 2.99
PCSK4-203ENST00000586002 SCRIBQ14160 1630 aa33.67■■■□□ 2.98
PCSK4-203ENST00000586002 BICRAQ9NZM4 1560 aa33.55■■■□□ 2.96
PCSK4-203ENST00000586002 SHROOM4Q9ULL8 1493 aa33.24■■■□□ 2.91
PCSK4-203ENST00000586002 DNAJC5BQ9UF47 199 aa32.85■■■□□ 2.85
PCSK4-203ENST00000586002 EIF4G1Q04637 1599 aaKnown RBP32.65■■■□□ 2.82
PCSK4-203ENST00000586002 CECR2Q9BXF3 1484 aa32.47■■■□□ 2.79
PCSK4-203ENST00000586002 CC2D2AQ9P2K1 1620 aa32.46■■■□□ 2.79
PCSK4-203ENST00000586002 BAZ1AQ9NRL2 1556 aaPredicted RBP32.28■■■□□ 2.76
PCSK4-203ENST00000586002 SMARCA4P51532 1647 aa32.24■■■□□ 2.75
PCSK4-203ENST00000586002 MROH2BQ7Z745 1585 aa32.13■■■□□ 2.73
PCSK4-203ENST00000586002 ATAD2BQ9ULI0 1458 aa32.09■■■□□ 2.73
PCSK4-203ENST00000586002 NCAPD3P42695 1498 aa32.05■■■□□ 2.72
PCSK4-203ENST00000586002 SMARCA2P51531 1590 aa32.02■■■□□ 2.72
PCSK4-203ENST00000586002 PEG3Q9GZU2 1588 aa31.93■■■□□ 2.7
PCSK4-203ENST00000586002 RSF1Q96T23 1441 aaPredicted RBP31.91■■■□□ 2.7
PCSK4-203ENST00000586002 HMGXB3Q12766 1538 aa31.82■■■□□ 2.68
PCSK4-203ENST00000586002 BAZ1BQ9UIG0 1483 aaKnown RBP31.81■■■□□ 2.68
PCSK4-203ENST00000586002 WIZO95785 1651 aa31.75■■■□□ 2.67
PCSK4-203ENST00000586002 TOP2AP11388 1531 aaKnown RBP31.44■■■□□ 2.62
PCSK4-203ENST00000586002 SUPT5HO00267 1087 aaKnown RBP31.41■■■□□ 2.62
PCSK4-203ENST00000586002 CADPSQ9ULU8 1353 aa31.17■■■□□ 2.58
PCSK4-203ENST00000586002 CCDC88BA6NC98 1476 aa31.15■■■□□ 2.58
PCSK4-203ENST00000586002 NESP48681 1621 aa31.15■■■□□ 2.58
PCSK4-203ENST00000586002 LAMC3Q9Y6N6 1575 aa31.09■■■□□ 2.57
PCSK4-203ENST00000586002 CFTRP13569 1480 aa30.98■■■□□ 2.55
PCSK4-203ENST00000586002 PDS5BQ9NTI5 1447 aa30.98■■■□□ 2.55
PCSK4-203ENST00000586002 ERCC6Q03468 1493 aa30.96■■■□□ 2.55
PCSK4-203ENST00000586002 FANCD2Q9BXW9 1451 aa30.74■■■□□ 2.51
PCSK4-203ENST00000586002 KIF21AQ7Z4S6 1674 aa30.68■■■□□ 2.5
PCSK4-203ENST00000586002 CEP164Q9UPV0 1460 aa30.66■■■□□ 2.5
PCSK4-203ENST00000586002 PRDM2Q13029 1718 aa30.58■■■□□ 2.49
PCSK4-203ENST00000586002 MRC2Q9UBG0 1479 aa30.57■■■□□ 2.48
PCSK4-203ENST00000586002 CUX2O14529 1486 aa30.52■■■□□ 2.48
PCSK4-203ENST00000586002 THOC2Q8NI27 1593 aaKnown RBP30.52■■■□□ 2.48
PCSK4-203ENST00000586002 WDR62O43379 1518 aa30.4■■■□□ 2.46
PCSK4-203ENST00000586002 URB2Q14146 1524 aaKnown RBP30.39■■■□□ 2.46
PCSK4-203ENST00000586002 ABCC8Q09428 1581 aa30.34■■■□□ 2.45
PCSK4-203ENST00000586002 TOPBP1Q92547 1522 aa30.27■■■□□ 2.44
PCSK4-203ENST00000586002 DNMBPQ6XZF7 1577 aa30.22■■■□□ 2.43
PCSK4-203ENST00000586002 CUX1P39880 1505 aa30.11■■■□□ 2.41
PCSK4-203ENST00000586002 WRNQ14191 1432 aaPredicted RBP eCLIP30.08■■■□□ 2.41
PCSK4-203ENST00000586002 IFT140Q96RY7 1462 aa30.04■■■□□ 2.4
PCSK4-203ENST00000586002 POLA1P09884 1462 aaPredicted RBP30.02■■■□□ 2.4
PCSK4-203ENST00000586002 SOGA1O94964 1423 aa30■■■□□ 2.39
PCSK4-203ENST00000586002 FGD5Q6ZNL6 1462 aa29.98■■■□□ 2.39
PCSK4-203ENST00000586002 RAD54L2Q9Y4B4 1467 aa29.92■■■□□ 2.38
PCSK4-203ENST00000586002 TOP2BQ02880 1626 aa29.9■■■□□ 2.38
PCSK4-203ENST00000586002 SYNJ1O43426 1573 aa29.88■■■□□ 2.37
PCSK4-203ENST00000586002 TARBP1Q13395 1621 aaKnown RBP29.86■■■□□ 2.37
PCSK4-203ENST00000586002 ZNF608Q9ULD9 1512 aaPredicted RBP29.86■■■□□ 2.37
PCSK4-203ENST00000586002 BIVM-ERCC5R4GMW8 1640 aa29.85■■■□□ 2.37
PCSK4-203ENST00000586002 TDRD9Q8NDG6 1382 aaKnown RBP29.79■■■□□ 2.36
PCSK4-203ENST00000586002 AQRO60306 1485 aaKnown RBP eCLIP29.78■■■□□ 2.36
PCSK4-203ENST00000586002 ABCA10Q8WWZ4 1543 aa29.72■■■□□ 2.35
PCSK4-203ENST00000586002 TRIM41Q8WV44 630 aa29.67■■■□□ 2.34
PCSK4-203ENST00000586002 EIF4G3O43432 1585 aaKnown RBP29.64■■■□□ 2.34
PCSK4-203ENST00000586002 WDR97A6NE52 1622 aa29.63■■■□□ 2.33
PCSK4-203ENST00000586002 GAPVD1Q14C86 1478 aa29.61■■■□□ 2.33
PCSK4-203ENST00000586002 GRIN2BQ13224 1484 aa29.56■■■□□ 2.32
PCSK4-203ENST00000586002 ABCA5Q8WWZ7 1642 aa29.49■■■□□ 2.31
PCSK4-203ENST00000586002 CHIC1Q5VXU3 224 aa29.47■■■□□ 2.31
PCSK4-203ENST00000586002 OSCARQ8IYS5 282 aa29.47■■■□□ 2.31
PCSK4-203ENST00000586002 FBLN2P98095 1184 aa29.46■■■□□ 2.31
PCSK4-203ENST00000586002 KIF27Q86VH2 1401 aa29.45■■■□□ 2.31
PCSK4-203ENST00000586002 SNAPC4Q5SXM2 1469 aa29.44■■■□□ 2.3
PCSK4-203ENST00000586002 MAGI1Q96QZ7 1491 aaPredicted RBP29.43■■■□□ 2.3
PCSK4-203ENST00000586002 CHMP7Q8WUX9 453 aaPredicted RBP29.43■■■□□ 2.3
PCSK4-203ENST00000586002 DNAJC5Q9H3Z4 198 aa29.43■■■□□ 2.3
PCSK4-203ENST00000586002 PBRM1Q86U86 1689 aa29.37■■■□□ 2.29
PCSK4-203ENST00000586002 ERICH3Q5RHP9 1530 aa29.35■■■□□ 2.29
PCSK4-203ENST00000586002 IGF1RP08069 1367 aa29.35■■■□□ 2.29
PCSK4-203ENST00000586002 SYNJ2O15056 1496 aa29.32■■■□□ 2.28
PCSK4-203ENST00000586002 FHAD1B1AJZ9 1412 aa29.28■■■□□ 2.28
PCSK4-203ENST00000586002 RUSC2Q8N2Y8 1516 aa29.23■■■□□ 2.27
PCSK4-203ENST00000586002 CHD1O14646 1710 aa29.22■■■□□ 2.27
PCSK4-203ENST00000586002 ADAMTS12P58397 1594 aa29.18■■■□□ 2.26
PCSK4-203ENST00000586002 CARMIL1Q5VZK9 1371 aa29.18■■■□□ 2.26
PCSK4-203ENST00000586002 GRIN2AQ12879 1464 aa29.14■■■□□ 2.26
PCSK4-203ENST00000586002 CSRNP3Q8WYN3 585 aa29.09■■■□□ 2.25
PCSK4-203ENST00000586002 CUL7Q14999 1698 aa29.08■■■□□ 2.25
PCSK4-203ENST00000586002 EEA1Q15075 1411 aa29.06■■■□□ 2.24
PCSK4-203ENST00000586002 FAM9AQ8IZU1 332 aaPredicted RBP29.03■■■□□ 2.24
PCSK4-203ENST00000586002 NUP160Q12769 1436 aa29.03■■■□□ 2.24
PCSK4-203ENST00000586002 RAPGEF2Q9Y4G8 1499 aa28.97■■■□□ 2.23
PCSK4-203ENST00000586002 CLASP1Q7Z460 1538 aa28.95■■■□□ 2.23
PCSK4-203ENST00000586002 CEP170Q5SW79 1584 aa28.93■■■□□ 2.22
PCSK4-203ENST00000586002 PRXQ9BXM0 1461 aa28.91■■■□□ 2.22
PCSK4-203ENST00000586002 JPH4Q96JJ6 628 aa28.88■■■□□ 2.21
PCSK4-203ENST00000586002 KIAA0586Q9BVV6 1533 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms