Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MS4A6AQ9H2W1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MS4A6AQ9H2W1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MS4A6AQ9H2W1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MS4A6AQ9H2W1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.75■□□□□ 0.75
MS4A6AQ9H2W1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
MS4A6AQ9H2W1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
MS4A6AQ9H2W1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
MS4A6AQ9H2W1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
MS4A6AQ9H2W1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MS4A6AQ9H2W1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MS4A6AQ9H2W1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
MS4A6AQ9H2W1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.74■□□□□ 0.75
MS4A6AQ9H2W1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MS4A6AQ9H2W1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MS4A6AQ9H2W1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MS4A6AQ9H2W1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MS4A6AQ9H2W1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.73■□□□□ 0.75
MS4A6AQ9H2W1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MS4A6AQ9H2W1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.72■□□□□ 0.75
MS4A6AQ9H2W1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MS4A6AQ9H2W1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MS4A6AQ9H2W1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.71■□□□□ 0.75
MS4A6AQ9H2W1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
MS4A6AQ9H2W1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MS4A6AQ9H2W1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
MS4A6AQ9H2W1 AL162393.1-201ENST00000437852 946 ntBASIC19.7■□□□□ 0.74
MS4A6AQ9H2W1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.7■□□□□ 0.74
MS4A6AQ9H2W1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MS4A6AQ9H2W1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MS4A6AQ9H2W1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MS4A6AQ9H2W1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MS4A6AQ9H2W1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
MS4A6AQ9H2W1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.68■□□□□ 0.74
MS4A6AQ9H2W1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MS4A6AQ9H2W1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.68■□□□□ 0.74
MS4A6AQ9H2W1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
MS4A6AQ9H2W1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A6AQ9H2W1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A6AQ9H2W1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.67■□□□□ 0.74
MS4A6AQ9H2W1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MS4A6AQ9H2W1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.66■□□□□ 0.74
MS4A6AQ9H2W1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A6AQ9H2W1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MS4A6AQ9H2W1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MS4A6AQ9H2W1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.65■□□□□ 0.74
MS4A6AQ9H2W1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
MS4A6AQ9H2W1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MS4A6AQ9H2W1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
MS4A6AQ9H2W1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MS4A6AQ9H2W1 AC108673.1-201ENST00000510422 1159 ntBASIC19.64■□□□□ 0.73
MS4A6AQ9H2W1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.64■□□□□ 0.73
MS4A6AQ9H2W1 AC087741.3-201ENST00000624270 1347 ntBASIC19.64■□□□□ 0.73
MS4A6AQ9H2W1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MS4A6AQ9H2W1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.64■□□□□ 0.73
MS4A6AQ9H2W1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MS4A6AQ9H2W1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A6AQ9H2W1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A6AQ9H2W1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.63■□□□□ 0.73
MS4A6AQ9H2W1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A6AQ9H2W1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MS4A6AQ9H2W1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MS4A6AQ9H2W1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MS4A6AQ9H2W1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.62■□□□□ 0.73
MS4A6AQ9H2W1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A6AQ9H2W1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A6AQ9H2W1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A6AQ9H2W1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A6AQ9H2W1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A6AQ9H2W1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MS4A6AQ9H2W1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MS4A6AQ9H2W1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.6■□□□□ 0.73
MS4A6AQ9H2W1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.6■□□□□ 0.73
MS4A6AQ9H2W1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
MS4A6AQ9H2W1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A6AQ9H2W1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MS4A6AQ9H2W1 AC044849.2-201ENST00000606596 710 ntBASIC19.59■□□□□ 0.73
MS4A6AQ9H2W1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.59■□□□□ 0.73
MS4A6AQ9H2W1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.59■□□□□ 0.73
MS4A6AQ9H2W1 AC127502.1-201ENST00000399971 1502 ntBASIC19.58■□□□□ 0.73
MS4A6AQ9H2W1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
MS4A6AQ9H2W1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MS4A6AQ9H2W1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
MS4A6AQ9H2W1 MIR6090-201ENST00000622481 60 ntBASIC19.58■□□□□ 0.72
MS4A6AQ9H2W1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MS4A6AQ9H2W1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MS4A6AQ9H2W1 AL139393.2-201ENST00000608721 2025 ntBASIC19.58■□□□□ 0.72
MS4A6AQ9H2W1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MS4A6AQ9H2W1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MS4A6AQ9H2W1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MS4A6AQ9H2W1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
MS4A6AQ9H2W1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MS4A6AQ9H2W1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MS4A6AQ9H2W1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MS4A6AQ9H2W1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MS4A6AQ9H2W1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.54■□□□□ 0.72
MS4A6AQ9H2W1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MS4A6AQ9H2W1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MS4A6AQ9H2W1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MS4A6AQ9H2W1 RPS2P35-201ENST00000443417 897 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms