Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ALX4Q9H161 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
ALX4Q9H161 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.85■■□□□ 1.09
ALX4Q9H161 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.85■■□□□ 1.09
ALX4Q9H161 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
ALX4Q9H161 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.85■■□□□ 1.09
ALX4Q9H161 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ALX4Q9H161 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ALX4Q9H161 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
ALX4Q9H161 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.84■■□□□ 1.09
ALX4Q9H161 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.84■■□□□ 1.09
ALX4Q9H161 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ALX4Q9H161 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ALX4Q9H161 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
ALX4Q9H161 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ALX4Q9H161 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ALX4Q9H161 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ALX4Q9H161 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.82■■□□□ 1.08
ALX4Q9H161 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
ALX4Q9H161 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ALX4Q9H161 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.8■■□□□ 1.08
ALX4Q9H161 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALX4Q9H161 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ALX4Q9H161 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ALX4Q9H161 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.79■■□□□ 1.08
ALX4Q9H161 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.79■■□□□ 1.08
ALX4Q9H161 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALX4Q9H161 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ALX4Q9H161 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.78■■□□□ 1.08
ALX4Q9H161 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ALX4Q9H161 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALX4Q9H161 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ALX4Q9H161 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ALX4Q9H161 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ALX4Q9H161 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ALX4Q9H161 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.76■■□□□ 1.07
ALX4Q9H161 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ALX4Q9H161 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ALX4Q9H161 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.75■■□□□ 1.07
ALX4Q9H161 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.75■■□□□ 1.07
ALX4Q9H161 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ALX4Q9H161 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ALX4Q9H161 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ALX4Q9H161 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ALX4Q9H161 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ALX4Q9H161 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ALX4Q9H161 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.74■■□□□ 1.07
ALX4Q9H161 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ALX4Q9H161 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
ALX4Q9H161 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ALX4Q9H161 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.73■■□□□ 1.07
ALX4Q9H161 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ALX4Q9H161 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ALX4Q9H161 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ALX4Q9H161 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ALX4Q9H161 AL449106.1-201ENST00000608517 1980 ntBASIC21.71■■□□□ 1.07
ALX4Q9H161 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.71■■□□□ 1.07
ALX4Q9H161 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ALX4Q9H161 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ALX4Q9H161 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ALX4Q9H161 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ALX4Q9H161 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
ALX4Q9H161 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ALX4Q9H161 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ALX4Q9H161 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
ALX4Q9H161 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ALX4Q9H161 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ALX4Q9H161 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ALX4Q9H161 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ALX4Q9H161 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ALX4Q9H161 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ALX4Q9H161 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.67■■□□□ 1.06
ALX4Q9H161 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ALX4Q9H161 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.67■■□□□ 1.06
ALX4Q9H161 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.66■■□□□ 1.06
ALX4Q9H161 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ALX4Q9H161 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.66■■□□□ 1.06
ALX4Q9H161 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ALX4Q9H161 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ALX4Q9H161 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.66■■□□□ 1.06
ALX4Q9H161 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ALX4Q9H161 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
ALX4Q9H161 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ALX4Q9H161 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.65■■□□□ 1.06
ALX4Q9H161 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.65■■□□□ 1.06
ALX4Q9H161 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ALX4Q9H161 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
ALX4Q9H161 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ALX4Q9H161 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ALX4Q9H161 RARRES2P7-201ENST00000567349 469 ntBASIC21.64■■□□□ 1.05
ALX4Q9H161 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.05
ALX4Q9H161 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
ALX4Q9H161 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ALX4Q9H161 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ALX4Q9H161 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ALX4Q9H161 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.63■■□□□ 1.05
ALX4Q9H161 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ALX4Q9H161 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ALX4Q9H161 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.61■■□□□ 1.05
ALX4Q9H161 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms