Protein–RNA interactions for Protein: Q969L4

LSM10, U7 snRNA-associated Sm-like protein LSm10, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10Q969L4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.09■□□□□ 0.97
LSM10Q969L4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LSM10Q969L4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
LSM10Q969L4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
LSM10Q969L4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
LSM10Q969L4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
LSM10Q969L4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LSM10Q969L4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LSM10Q969L4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.07■□□□□ 0.96
LSM10Q969L4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LSM10Q969L4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.06■□□□□ 0.96
LSM10Q969L4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LSM10Q969L4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LSM10Q969L4 AP004833.2-201ENST00000532228 1454 ntBASIC21.06■□□□□ 0.96
LSM10Q969L4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LSM10Q969L4 BX255925.1-201ENST00000566954 1854 ntBASIC21.05■□□□□ 0.96
LSM10Q969L4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM10Q969L4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM10Q969L4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.05■□□□□ 0.96
LSM10Q969L4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LSM10Q969L4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.04■□□□□ 0.96
LSM10Q969L4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.04■□□□□ 0.96
LSM10Q969L4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
LSM10Q969L4 RARRES2P7-201ENST00000567349 469 ntBASIC21.04■□□□□ 0.96
LSM10Q969L4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LSM10Q969L4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LSM10Q969L4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LSM10Q969L4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LSM10Q969L4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.02■□□□□ 0.96
LSM10Q969L4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSM10Q969L4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.02■□□□□ 0.96
LSM10Q969L4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LSM10Q969L4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LSM10Q969L4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSM10Q969L4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSM10Q969L4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSM10Q969L4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LSM10Q969L4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21■□□□□ 0.95
LSM10Q969L4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21■□□□□ 0.95
LSM10Q969L4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LSM10Q969L4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.99■□□□□ 0.95
LSM10Q969L4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSM10Q969L4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.99■□□□□ 0.95
LSM10Q969L4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LSM10Q969L4 SETD8P1-201ENST00000623146 1180 ntBASIC20.98■□□□□ 0.95
LSM10Q969L4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LSM10Q969L4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
LSM10Q969L4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.97■□□□□ 0.95
LSM10Q969L4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LSM10Q969L4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSM10Q969L4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSM10Q969L4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSM10Q969L4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
LSM10Q969L4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM10Q969L4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM10Q969L4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LSM10Q969L4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM10Q969L4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSM10Q969L4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LSM10Q969L4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LSM10Q969L4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
LSM10Q969L4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSM10Q969L4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSM10Q969L4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.94■□□□□ 0.94
LSM10Q969L4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LSM10Q969L4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.94■□□□□ 0.94
LSM10Q969L4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.93■□□□□ 0.94
LSM10Q969L4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSM10Q969L4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSM10Q969L4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.93■□□□□ 0.94
LSM10Q969L4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LSM10Q969L4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LSM10Q969L4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.92■□□□□ 0.94
LSM10Q969L4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSM10Q969L4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LSM10Q969L4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.92■□□□□ 0.94
LSM10Q969L4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LSM10Q969L4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LSM10Q969L4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
LSM10Q969L4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.91■□□□□ 0.94
LSM10Q969L4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSM10Q969L4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSM10Q969L4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LSM10Q969L4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.9■□□□□ 0.94
LSM10Q969L4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSM10Q969L4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.9■□□□□ 0.94
LSM10Q969L4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LSM10Q969L4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
LSM10Q969L4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LSM10Q969L4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.89■□□□□ 0.93
LSM10Q969L4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM10Q969L4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM10Q969L4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
LSM10Q969L4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM10Q969L4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM10Q969L4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM10Q969L4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM10Q969L4 LINC01003-201ENST00000564834 1764 ntBASIC20.87■□□□□ 0.93
LSM10Q969L4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM10Q969L4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms