Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.4□□□□□ -0.1
SPTSSBQ8NFR3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSBQ8NFR3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSBQ8NFR3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
SPTSSBQ8NFR3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSBQ8NFR3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPTSSBQ8NFR3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSBQ8NFR3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSBQ8NFR3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSBQ8NFR3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSBQ8NFR3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC14.38□□□□□ -0.11
SPTSSBQ8NFR3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SPTSSBQ8NFR3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SPTSSBQ8NFR3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC14.37□□□□□ -0.11
SPTSSBQ8NFR3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
SPTSSBQ8NFR3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SPTSSBQ8NFR3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSBQ8NFR3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSBQ8NFR3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSBQ8NFR3 AC145285.7-201ENST00000614819 1539 ntBASIC14.36□□□□□ -0.11
SPTSSBQ8NFR3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSBQ8NFR3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SPTSSBQ8NFR3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SPTSSBQ8NFR3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSBQ8NFR3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSBQ8NFR3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSBQ8NFR3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSBQ8NFR3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSBQ8NFR3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSBQ8NFR3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPTSSBQ8NFR3 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SPTSSBQ8NFR3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SPTSSBQ8NFR3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPTSSBQ8NFR3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSBQ8NFR3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSBQ8NFR3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSBQ8NFR3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPTSSBQ8NFR3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSBQ8NFR3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSBQ8NFR3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC14.32□□□□□ -0.12
SPTSSBQ8NFR3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSBQ8NFR3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSBQ8NFR3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSBQ8NFR3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SPTSSBQ8NFR3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSBQ8NFR3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SPTSSBQ8NFR3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTSSBQ8NFR3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SPTSSBQ8NFR3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC14.31□□□□□ -0.12
SPTSSBQ8NFR3 ABCB10P1-201ENST00000614297 2181 ntBASIC14.31□□□□□ -0.12
SPTSSBQ8NFR3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTSSBQ8NFR3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SPTSSBQ8NFR3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSBQ8NFR3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC14.29□□□□□ -0.12
SPTSSBQ8NFR3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSBQ8NFR3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSBQ8NFR3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSBQ8NFR3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPTSSBQ8NFR3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSBQ8NFR3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SPTSSBQ8NFR3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSBQ8NFR3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPTSSBQ8NFR3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
SPTSSBQ8NFR3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPTSSBQ8NFR3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.27□□□□□ -0.12
SPTSSBQ8NFR3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPTSSBQ8NFR3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SPTSSBQ8NFR3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC14.27□□□□□ -0.13
SPTSSBQ8NFR3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SPTSSBQ8NFR3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSBQ8NFR3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
SPTSSBQ8NFR3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSBQ8NFR3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSBQ8NFR3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC14.26□□□□□ -0.13
SPTSSBQ8NFR3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSBQ8NFR3 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SPTSSBQ8NFR3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC14.25□□□□□ -0.13
SPTSSBQ8NFR3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTSSBQ8NFR3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SPTSSBQ8NFR3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSBQ8NFR3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSBQ8NFR3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSBQ8NFR3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSBQ8NFR3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms