Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
RNF169Q8NCN4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RNF169Q8NCN4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
RNF169Q8NCN4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.4■■■□□ 2.14
RNF169Q8NCN4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.4■■■□□ 2.14
RNF169Q8NCN4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
RNF169Q8NCN4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
RNF169Q8NCN4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
RNF169Q8NCN4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
RNF169Q8NCN4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RNF169Q8NCN4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RNF169Q8NCN4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RNF169Q8NCN4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
RNF169Q8NCN4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.35■■■□□ 2.13
RNF169Q8NCN4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RNF169Q8NCN4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
RNF169Q8NCN4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
RNF169Q8NCN4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RNF169Q8NCN4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.34■■■□□ 2.13
RNF169Q8NCN4 HSD17B1P1-201ENST00000590052 955 ntBASIC28.34■■■□□ 2.13
RNF169Q8NCN4 LINC00273-201ENST00000539813 1452 ntBASIC28.33■■■□□ 2.13
RNF169Q8NCN4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
RNF169Q8NCN4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.32■■■□□ 2.12
RNF169Q8NCN4 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.32■■■□□ 2.12
RNF169Q8NCN4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.32■■■□□ 2.12
RNF169Q8NCN4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.32■■■□□ 2.12
RNF169Q8NCN4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RNF169Q8NCN4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RNF169Q8NCN4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
RNF169Q8NCN4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
RNF169Q8NCN4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
RNF169Q8NCN4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
RNF169Q8NCN4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
RNF169Q8NCN4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
RNF169Q8NCN4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RNF169Q8NCN4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
RNF169Q8NCN4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.29■■■□□ 2.12
RNF169Q8NCN4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.29■■■□□ 2.12
RNF169Q8NCN4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
RNF169Q8NCN4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RNF169Q8NCN4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.27■■■□□ 2.12
RNF169Q8NCN4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RNF169Q8NCN4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.27■■■□□ 2.12
RNF169Q8NCN4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
RNF169Q8NCN4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
RNF169Q8NCN4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
RNF169Q8NCN4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.25■■■□□ 2.11
RNF169Q8NCN4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RNF169Q8NCN4 AC127502.1-201ENST00000399971 1502 ntBASIC28.24■■■□□ 2.11
RNF169Q8NCN4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RNF169Q8NCN4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RNF169Q8NCN4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RNF169Q8NCN4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RNF169Q8NCN4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.21■■■□□ 2.11
RNF169Q8NCN4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.2■■■□□ 2.1
RNF169Q8NCN4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
RNF169Q8NCN4 AL135925.1-201ENST00000605920 1701 ntBASIC28.19■■■□□ 2.1
RNF169Q8NCN4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.19■■■□□ 2.1
RNF169Q8NCN4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RNF169Q8NCN4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
RNF169Q8NCN4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.18■■■□□ 2.1
RNF169Q8NCN4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
RNF169Q8NCN4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RNF169Q8NCN4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
RNF169Q8NCN4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RNF169Q8NCN4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
RNF169Q8NCN4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RNF169Q8NCN4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RNF169Q8NCN4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.14■■■□□ 2.1
RNF169Q8NCN4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.13■■■□□ 2.09
RNF169Q8NCN4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RNF169Q8NCN4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.12■■■□□ 2.09
RNF169Q8NCN4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
RNF169Q8NCN4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
RNF169Q8NCN4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
RNF169Q8NCN4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RNF169Q8NCN4 WHAMMP2-203ENST00000563942 1603 ntBASIC28.1■■■□□ 2.09
RNF169Q8NCN4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
RNF169Q8NCN4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.09■■■□□ 2.09
RNF169Q8NCN4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.09■■■□□ 2.09
RNF169Q8NCN4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
RNF169Q8NCN4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
RNF169Q8NCN4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.08■■■□□ 2.09
RNF169Q8NCN4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
RNF169Q8NCN4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
RNF169Q8NCN4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
RNF169Q8NCN4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.07■■■□□ 2.08
RNF169Q8NCN4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.07■■■□□ 2.08
RNF169Q8NCN4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RNF169Q8NCN4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.07■■■□□ 2.08
RNF169Q8NCN4 AC135983.2-203ENST00000454486 1613 ntBASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms