Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB11AP62491 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB11AP62491 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAB11AP62491 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
RAB11AP62491 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB11AP62491 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB11AP62491 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB11AP62491 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RAB11AP62491 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB11AP62491 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB11AP62491 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAB11AP62491 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB11AP62491 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB11AP62491 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RAB11AP62491 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11AP62491 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.8■□□□□ 0.92
RAB11AP62491 DRD5P2-201ENST00000421395 2012 ntBASIC20.8■□□□□ 0.92
RAB11AP62491 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB11AP62491 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB11AP62491 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB11AP62491 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11AP62491 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11AP62491 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11AP62491 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.78■□□□□ 0.92
RAB11AP62491 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB11AP62491 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RAB11AP62491 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB11AP62491 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RAB11AP62491 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RAB11AP62491 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB11AP62491 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
RAB11AP62491 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB11AP62491 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
RAB11AP62491 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB11AP62491 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RAB11AP62491 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB11AP62491 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.74■□□□□ 0.91
RAB11AP62491 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.74■□□□□ 0.91
RAB11AP62491 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB11AP62491 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11AP62491 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11AP62491 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11AP62491 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB11AP62491 AC010864.1-201ENST00000609407 1511 ntBASIC20.73■□□□□ 0.91
RAB11AP62491 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RAB11AP62491 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11AP62491 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11AP62491 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB11AP62491 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RAB11AP62491 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RAB11AP62491 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RAB11AP62491 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB11AP62491 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
RAB11AP62491 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB11AP62491 AL133380.1-201ENST00000506013 324 ntBASIC20.7■□□□□ 0.9
RAB11AP62491 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11AP62491 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB11AP62491 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB11AP62491 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11AP62491 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RAB11AP62491 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB11AP62491 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB11AP62491 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB11AP62491 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB11AP62491 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB11AP62491 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RAB11AP62491 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RAB11AP62491 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB11AP62491 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RAB11AP62491 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB11AP62491 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.65■□□□□ 0.9
RAB11AP62491 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.65■□□□□ 0.9
RAB11AP62491 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB11AP62491 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB11AP62491 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
RAB11AP62491 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.64■□□□□ 0.89
RAB11AP62491 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB11AP62491 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RAB11AP62491 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB11AP62491 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB11AP62491 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB11AP62491 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB11AP62491 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.63■□□□□ 0.89
RAB11AP62491 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB11AP62491 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB11AP62491 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB11AP62491 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB11AP62491 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB11AP62491 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB11AP62491 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB11AP62491 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB11AP62491 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RAB11AP62491 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RAB11AP62491 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAB11AP62491 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB11AP62491 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.61■□□□□ 0.89
RAB11AP62491 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RAB11AP62491 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB11AP62491 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAB11AP62491 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms