Protein–RNA interactions for Protein: P62318

SNRPD3, Small nuclear ribonucleoprotein Sm D3, humanhuman

Known RBP Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3P62318 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNRPD3P62318 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNRPD3P62318 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNRPD3P62318 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNRPD3P62318 AC108673.1-201ENST00000510422 1159 ntBASIC19.5■□□□□ 0.71
SNRPD3P62318 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNRPD3P62318 AC139426.1-201ENST00000568218 2529 ntBASIC19.5■□□□□ 0.71
SNRPD3P62318 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRPD3P62318 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRPD3P62318 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRPD3P62318 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SNRPD3P62318 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRPD3P62318 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRPD3P62318 DUX4L28-201ENST00000623687 678 ntBASIC19.49■□□□□ 0.71
SNRPD3P62318 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.49■□□□□ 0.71
SNRPD3P62318 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SNRPD3P62318 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.48■□□□□ 0.71
SNRPD3P62318 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.48■□□□□ 0.71
SNRPD3P62318 AL139393.2-201ENST00000608721 2025 ntBASIC19.47■□□□□ 0.71
SNRPD3P62318 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.46■□□□□ 0.71
SNRPD3P62318 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.46■□□□□ 0.71
SNRPD3P62318 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNRPD3P62318 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNRPD3P62318 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRPD3P62318 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRPD3P62318 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SNRPD3P62318 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRPD3P62318 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRPD3P62318 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRPD3P62318 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRPD3P62318 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRPD3P62318 AC127502.1-201ENST00000399971 1502 ntBASIC19.43■□□□□ 0.7
SNRPD3P62318 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.42■□□□□ 0.7
SNRPD3P62318 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRPD3P62318 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNRPD3P62318 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.41■□□□□ 0.7
SNRPD3P62318 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNRPD3P62318 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.41■□□□□ 0.7
SNRPD3P62318 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRPD3P62318 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRPD3P62318 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPD3P62318 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPD3P62318 AC044849.2-201ENST00000606596 710 ntBASIC19.4■□□□□ 0.7
SNRPD3P62318 AP004833.2-201ENST00000532228 1454 ntBASIC19.4■□□□□ 0.7
SNRPD3P62318 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPD3P62318 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPD3P62318 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNRPD3P62318 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SNRPD3P62318 AL162393.1-201ENST00000437852 946 ntBASIC19.39■□□□□ 0.69
SNRPD3P62318 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.39■□□□□ 0.69
SNRPD3P62318 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPD3P62318 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPD3P62318 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRPD3P62318 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SNRPD3P62318 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SNRPD3P62318 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRPD3P62318 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRPD3P62318 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.37■□□□□ 0.69
SNRPD3P62318 AC087741.3-201ENST00000624270 1347 ntBASIC19.37■□□□□ 0.69
SNRPD3P62318 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNRPD3P62318 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.37■□□□□ 0.69
SNRPD3P62318 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNRPD3P62318 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNRPD3P62318 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNRPD3P62318 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNRPD3P62318 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.35■□□□□ 0.69
SNRPD3P62318 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
SNRPD3P62318 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNRPD3P62318 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.35■□□□□ 0.69
SNRPD3P62318 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNRPD3P62318 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.34■□□□□ 0.69
SNRPD3P62318 MIR6090-201ENST00000622481 60 ntBASIC19.34■□□□□ 0.69
SNRPD3P62318 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNRPD3P62318 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.34■□□□□ 0.69
SNRPD3P62318 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNRPD3P62318 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.33■□□□□ 0.69
SNRPD3P62318 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNRPD3P62318 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SNRPD3P62318 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.33■□□□□ 0.68
SNRPD3P62318 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNRPD3P62318 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNRPD3P62318 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNRPD3P62318 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.31■□□□□ 0.68
SNRPD3P62318 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.31■□□□□ 0.68
SNRPD3P62318 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SNRPD3P62318 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPD3P62318 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPD3P62318 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPD3P62318 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.3■□□□□ 0.68
SNRPD3P62318 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPD3P62318 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRPD3P62318 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.29■□□□□ 0.68
SNRPD3P62318 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
SNRPD3P62318 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.29■□□□□ 0.68
SNRPD3P62318 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNRPD3P62318 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNRPD3P62318 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNRPD3P62318 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SNRPD3P62318 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNRPD3P62318 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms