Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CKS2P33552 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CKS2P33552 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CKS2P33552 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CKS2P33552 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CKS2P33552 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CKS2P33552 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CKS2P33552 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.98■□□□□ 0.63
CKS2P33552 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CKS2P33552 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CKS2P33552 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.97■□□□□ 0.63
CKS2P33552 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CKS2P33552 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CKS2P33552 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CKS2P33552 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CKS2P33552 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CKS2P33552 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CKS2P33552 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CKS2P33552 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.95■□□□□ 0.62
CKS2P33552 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CKS2P33552 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CKS2P33552 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CKS2P33552 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CKS2P33552 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CKS2P33552 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CKS2P33552 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CKS2P33552 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CKS2P33552 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CKS2P33552 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CKS2P33552 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CKS2P33552 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CKS2P33552 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CKS2P33552 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.9■□□□□ 0.62
CKS2P33552 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CKS2P33552 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CKS2P33552 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKS2P33552 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CKS2P33552 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKS2P33552 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKS2P33552 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CKS2P33552 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CKS2P33552 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CKS2P33552 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CKS2P33552 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CKS2P33552 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CKS2P33552 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CKS2P33552 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CKS2P33552 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CKS2P33552 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.87■□□□□ 0.61
CKS2P33552 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CKS2P33552 BX255925.1-201ENST00000566954 1854 ntBASIC18.87■□□□□ 0.61
CKS2P33552 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.86■□□□□ 0.61
CKS2P33552 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.86■□□□□ 0.61
CKS2P33552 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CKS2P33552 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CKS2P33552 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CKS2P33552 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CKS2P33552 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKS2P33552 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKS2P33552 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKS2P33552 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKS2P33552 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CKS2P33552 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CKS2P33552 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.84■□□□□ 0.61
CKS2P33552 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CKS2P33552 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CKS2P33552 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CKS2P33552 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CKS2P33552 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.83■□□□□ 0.61
CKS2P33552 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CKS2P33552 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.83■□□□□ 0.6
CKS2P33552 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.83■□□□□ 0.6
CKS2P33552 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.82■□□□□ 0.6
CKS2P33552 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CKS2P33552 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CKS2P33552 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.81■□□□□ 0.6
CKS2P33552 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CKS2P33552 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CKS2P33552 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.81■□□□□ 0.6
CKS2P33552 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.81■□□□□ 0.6
CKS2P33552 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CKS2P33552 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CKS2P33552 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CKS2P33552 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CKS2P33552 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKS2P33552 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKS2P33552 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CKS2P33552 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.79■□□□□ 0.6
CKS2P33552 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CKS2P33552 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CKS2P33552 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CKS2P33552 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.78■□□□□ 0.6
CKS2P33552 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CKS2P33552 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.77■□□□□ 0.6
CKS2P33552 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CKS2P33552 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.77■□□□□ 0.6
CKS2P33552 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.77■□□□□ 0.6
CKS2P33552 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CKS2P33552 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CKS2P33552 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms