Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SIRPB1O00241 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SIRPB1O00241 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SIRPB1O00241 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SIRPB1O00241 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SIRPB1O00241 AC005559.1-201ENST00000589661 871 ntBASIC21.83■■□□□ 1.09
SIRPB1O00241 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SIRPB1O00241 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SIRPB1O00241 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
SIRPB1O00241 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SIRPB1O00241 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SIRPB1O00241 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SIRPB1O00241 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SIRPB1O00241 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIRPB1O00241 AC127502.1-201ENST00000399971 1502 ntBASIC21.79■■□□□ 1.08
SIRPB1O00241 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIRPB1O00241 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIRPB1O00241 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SIRPB1O00241 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.78■■□□□ 1.08
SIRPB1O00241 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SIRPB1O00241 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SIRPB1O00241 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIRPB1O00241 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIRPB1O00241 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIRPB1O00241 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SIRPB1O00241 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIRPB1O00241 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.75■■□□□ 1.07
SIRPB1O00241 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
SIRPB1O00241 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.74■■□□□ 1.07
SIRPB1O00241 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.74■■□□□ 1.07
SIRPB1O00241 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIRPB1O00241 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SIRPB1O00241 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.73■■□□□ 1.07
SIRPB1O00241 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SIRPB1O00241 DUX4L28-201ENST00000623687 678 ntBASIC21.72■■□□□ 1.07
SIRPB1O00241 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIRPB1O00241 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SIRPB1O00241 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIRPB1O00241 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.71■■□□□ 1.07
SIRPB1O00241 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIRPB1O00241 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIRPB1O00241 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
SIRPB1O00241 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.71■■□□□ 1.07
SIRPB1O00241 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIRPB1O00241 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.7■■□□□ 1.06
SIRPB1O00241 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.7■■□□□ 1.06
SIRPB1O00241 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SIRPB1O00241 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIRPB1O00241 DRD5P2-201ENST00000421395 2012 ntBASIC21.7■■□□□ 1.06
SIRPB1O00241 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.7■■□□□ 1.06
SIRPB1O00241 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SIRPB1O00241 AC142086.6-201ENST00000621154 1765 ntBASIC21.69■■□□□ 1.06
SIRPB1O00241 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIRPB1O00241 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.69■■□□□ 1.06
SIRPB1O00241 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.69■■□□□ 1.06
SIRPB1O00241 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SIRPB1O00241 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
SIRPB1O00241 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SIRPB1O00241 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.68■■□□□ 1.06
SIRPB1O00241 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SIRPB1O00241 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.68■■□□□ 1.06
SIRPB1O00241 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.67■■□□□ 1.06
SIRPB1O00241 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIRPB1O00241 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIRPB1O00241 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIRPB1O00241 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIRPB1O00241 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
SIRPB1O00241 MIR3665-201ENST00000578708 105 ntBASIC21.67■■□□□ 1.06
SIRPB1O00241 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SIRPB1O00241 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.66■■□□□ 1.06
SIRPB1O00241 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIRPB1O00241 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIRPB1O00241 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SIRPB1O00241 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SIRPB1O00241 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SIRPB1O00241 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SIRPB1O00241 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.65■■□□□ 1.06
SIRPB1O00241 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SIRPB1O00241 AP004833.2-201ENST00000532228 1454 ntBASIC21.64■■□□□ 1.06
SIRPB1O00241 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SIRPB1O00241 AC108673.1-201ENST00000510422 1159 ntBASIC21.64■■□□□ 1.05
SIRPB1O00241 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.64■■□□□ 1.05
SIRPB1O00241 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SIRPB1O00241 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.64■■□□□ 1.05
SIRPB1O00241 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
SIRPB1O00241 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SIRPB1O00241 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIRPB1O00241 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SIRPB1O00241 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SIRPB1O00241 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIRPB1O00241 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIRPB1O00241 AP006261.1-201ENST00000584783 668 ntBASIC21.63■■□□□ 1.05
SIRPB1O00241 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SIRPB1O00241 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SIRPB1O00241 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
SIRPB1O00241 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SIRPB1O00241 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
SIRPB1O00241 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SIRPB1O00241 MIR6090-201ENST00000622481 60 ntBASIC21.61■■□□□ 1.05
SIRPB1O00241 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms