Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHKB-CPT1BH3BT56 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CHKB-CPT1BH3BT56 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHKB-CPT1BH3BT56 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHKB-CPT1BH3BT56 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
CHKB-CPT1BH3BT56 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHKB-CPT1BH3BT56 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CHKB-CPT1BH3BT56 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHKB-CPT1BH3BT56 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHKB-CPT1BH3BT56 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHKB-CPT1BH3BT56 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHKB-CPT1BH3BT56 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CHKB-CPT1BH3BT56 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.72□□□□□ -0.05
CHKB-CPT1BH3BT56 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHKB-CPT1BH3BT56 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CHKB-CPT1BH3BT56 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHKB-CPT1BH3BT56 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHKB-CPT1BH3BT56 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CHKB-CPT1BH3BT56 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHKB-CPT1BH3BT56 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHKB-CPT1BH3BT56 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHKB-CPT1BH3BT56 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHKB-CPT1BH3BT56 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHKB-CPT1BH3BT56 PKM-204ENST00000449901 2526 ntTSL 2 BASIC14.69□□□□□ -0.06
CHKB-CPT1BH3BT56 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHKB-CPT1BH3BT56 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CHKB-CPT1BH3BT56 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHKB-CPT1BH3BT56 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHKB-CPT1BH3BT56 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHKB-CPT1BH3BT56 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHKB-CPT1BH3BT56 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHKB-CPT1BH3BT56 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHKB-CPT1BH3BT56 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.68□□□□□ -0.06
CHKB-CPT1BH3BT56 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHKB-CPT1BH3BT56 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CHKB-CPT1BH3BT56 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHKB-CPT1BH3BT56 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHKB-CPT1BH3BT56 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHKB-CPT1BH3BT56 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHKB-CPT1BH3BT56 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CHKB-CPT1BH3BT56 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHKB-CPT1BH3BT56 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHKB-CPT1BH3BT56 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHKB-CPT1BH3BT56 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
CHKB-CPT1BH3BT56 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHKB-CPT1BH3BT56 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHKB-CPT1BH3BT56 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHKB-CPT1BH3BT56 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHKB-CPT1BH3BT56 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHKB-CPT1BH3BT56 CREM-210ENST00000374721 2020 ntTSL 5 BASIC14.62□□□□□ -0.07
CHKB-CPT1BH3BT56 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHKB-CPT1BH3BT56 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHKB-CPT1BH3BT56 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC14.61□□□□□ -0.07
CHKB-CPT1BH3BT56 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC14.61□□□□□ -0.07
CHKB-CPT1BH3BT56 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC14.61□□□□□ -0.07
CHKB-CPT1BH3BT56 SHF-207ENST00000560540 2062 ntTSL 5 BASIC14.61□□□□□ -0.07
CHKB-CPT1BH3BT56 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC14.6□□□□□ -0.07
CHKB-CPT1BH3BT56 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHKB-CPT1BH3BT56 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHKB-CPT1BH3BT56 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHKB-CPT1BH3BT56 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CHKB-CPT1BH3BT56 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHKB-CPT1BH3BT56 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHKB-CPT1BH3BT56 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHKB-CPT1BH3BT56 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHKB-CPT1BH3BT56 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHKB-CPT1BH3BT56 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHKB-CPT1BH3BT56 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHKB-CPT1BH3BT56 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHKB-CPT1BH3BT56 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHKB-CPT1BH3BT56 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHKB-CPT1BH3BT56 AC145285.7-201ENST00000614819 1539 ntBASIC14.58□□□□□ -0.08
CHKB-CPT1BH3BT56 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHKB-CPT1BH3BT56 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHKB-CPT1BH3BT56 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHKB-CPT1BH3BT56 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHKB-CPT1BH3BT56 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHKB-CPT1BH3BT56 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHKB-CPT1BH3BT56 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CHKB-CPT1BH3BT56 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHKB-CPT1BH3BT56 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHKB-CPT1BH3BT56 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHKB-CPT1BH3BT56 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHKB-CPT1BH3BT56 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms