RNA–Protein interactions for RNA: ENST00000404816.6

LTBP1-203, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene LTBP1, Length 6,333 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-203ENST00000404816 DCAF8L2P0C7V8 631 aa30.77■■■□□ 2.52
LTBP1-203ENST00000404816 SUPT5HO00267 1087 aaKnown RBP29.6■■■□□ 2.33
LTBP1-203ENST00000404816 EHMT2Q96KQ7 1210 aa29.37■■■□□ 2.29
LTBP1-203ENST00000404816 NISCHQ9Y2I1 1504 aa29.27■■■□□ 2.28
LTBP1-203ENST00000404816 PELP1Q8IZL8 1130 aaKnown RBP29.13■■■□□ 2.25
LTBP1-203ENST00000404816 SHROOM4Q9ULL8 1493 aa28.87■■■□□ 2.21
LTBP1-203ENST00000404816 PCGF6Q9BYE7 350 aa28.62■■■□□ 2.17
LTBP1-203ENST00000404816 TTBK1Q5TCY1 1321 aaPredicted RBP28.47■■■□□ 2.15
LTBP1-203ENST00000404816 ERICH6Q7L0X2 663 aa28.42■■■□□ 2.14
LTBP1-203ENST00000404816 CENPBP07199 599 aaPredicted RBP28.18■■■□□ 2.1
LTBP1-203ENST00000404816 FAM9AQ8IZU1 332 aaPredicted RBP28.12■■■□□ 2.09
LTBP1-203ENST00000404816 YTHDC1Q96MU7 727 aaKnown RBP28.04■■■□□ 2.08
LTBP1-203ENST00000404816 APLP2Q06481 763 aa27.92■■■□□ 2.06
LTBP1-203ENST00000404816 MYT1Q01538 1121 aa27.9■■■□□ 2.06
LTBP1-203ENST00000404816 CCER1Q8TC90 406 aaPredicted RBP27.79■■■□□ 2.04
LTBP1-203ENST00000404816 ZEB1P37275 1124 aaPredicted RBP27.63■■■□□ 2.01
LTBP1-203ENST00000404816 RANGAP1P46060 587 aaPredicted RBP27.61■■■□□ 2.01
LTBP1-203ENST00000404816 NEFLP07196 543 aa27.43■■□□□ 1.98
LTBP1-203ENST00000404816 PPARGC1BQ86YN6 1023 aaKnown RBP27.36■■□□□ 1.97
LTBP1-203ENST00000404816 ATP1B4Q9UN42 357 aaPredicted RBP27.27■■□□□ 1.96
LTBP1-203ENST00000404816 HRCP23327 699 aa27.13■■□□□ 1.93
LTBP1-203ENST00000404816 TRIM41Q8WV44 630 aa27.04■■□□□ 1.92
LTBP1-203ENST00000404816 UBTFP17480 764 aaKnown RBP26.82■■□□□ 1.88
LTBP1-203ENST00000404816 TRIM26Q12899 539 aaPredicted RBP26.81■■□□□ 1.88
LTBP1-203ENST00000404816 DAXXQ9UER7 740 aaPredicted RBP26.75■■□□□ 1.87
LTBP1-203ENST00000404816 CNGB1Q14028 1251 aaPredicted RBP26.65■■□□□ 1.86
LTBP1-203ENST00000404816 POLR3GLQ9BT43 218 aa26.56■■□□□ 1.84
LTBP1-203ENST00000404816 LOC105371045A0A1W2PR82 267 aa26.53■■□□□ 1.84
LTBP1-203ENST00000404816 ITGAEP38570 1179 aa26.49■■□□□ 1.83
LTBP1-203ENST00000404816 BCANQ96GW7 911 aa26.44■■□□□ 1.82
LTBP1-203ENST00000404816 RTL5Q5HYW3 569 aaPredicted RBP26.43■■□□□ 1.82
LTBP1-203ENST00000404816 GTF3C3Q9Y5Q9 886 aa26.43■■□□□ 1.82
LTBP1-203ENST00000404816 DIEXFQ68CQ4 756 aaKnown RBP26.4■■□□□ 1.82
LTBP1-203ENST00000404816 MYT1LQ9UL68 1186 aa26.4■■□□□ 1.82
LTBP1-203ENST00000404816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.36■■□□□ 1.81
LTBP1-203ENST00000404816 HNRNPUL2Q1KMD3 747 aaKnown RBP26.36■■□□□ 1.81
LTBP1-203ENST00000404816 ZNF316A6NFI3 1004 aaPredicted RBP26.23■■□□□ 1.79
LTBP1-203ENST00000404816 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
LTBP1-203ENST00000404816 CLSPNQ9HAW4 1339 aa26.04■■□□□ 1.76
LTBP1-203ENST00000404816 SLC4A1APQ9BWU0 796 aaKnown RBP25.99■■□□□ 1.75
LTBP1-203ENST00000404816 CDK11AQ9UQ88 783 aaPredicted RBP25.79■■□□□ 1.72
LTBP1-203ENST00000404816 ACIN1Q9UKV3 1341 aaKnown RBP25.79■■□□□ 1.72
LTBP1-203ENST00000404816 EIF5BO60841 1220 aaKnown RBP25.76■■□□□ 1.71
LTBP1-203ENST00000404816 NEUROD1Q13562 356 aa25.68■■□□□ 1.7
LTBP1-203ENST00000404816 NPM2Q86SE8 214 aaKnown RBP25.56■■□□□ 1.68
LTBP1-203ENST00000404816 BCL11AQ9H165 835 aa25.54■■□□□ 1.68
LTBP1-203ENST00000404816 FAM50AQ14320 339 aaKnown RBP25.48■■□□□ 1.67
LTBP1-203ENST00000404816 ANP32CO43423 234 aa25.46■■□□□ 1.67
LTBP1-203ENST00000404816 SLC24A1O60721 1099 aa25.38■■□□□ 1.65
LTBP1-203ENST00000404816 ANP32AP39687 249 aaKnown RBP25.37■■□□□ 1.65
LTBP1-203ENST00000404816 FKBP8Q14318 412 aa25.35■■□□□ 1.65
LTBP1-203ENST00000404816 NBR1Q14596 966 aa25.35■■□□□ 1.65
LTBP1-203ENST00000404816 TRIM52Q96A61 297 aa25.33■■□□□ 1.65
LTBP1-203ENST00000404816 SCAF1Q9H7N4 1312 aaKnown RBP25.33■■□□□ 1.65
LTBP1-203ENST00000404816 ZNF326Q5BKZ1 582 aaKnown RBP25.31■■□□□ 1.64
LTBP1-203ENST00000404816 ZBTB47Q9UFB7 747 aaPredicted RBP25.23■■□□□ 1.63
LTBP1-203ENST00000404816 ARXQ96QS3 562 aa25.16■■□□□ 1.62
LTBP1-203ENST00000404816 CANXP27824 592 aaKnown RBP25.16■■□□□ 1.62
LTBP1-203ENST00000404816 GLIPR1L2Q4G1C9 344 aa25.01■■□□□ 1.59
LTBP1-203ENST00000404816 ABCC9O60706 1549 aa24.98■■□□□ 1.59
LTBP1-203ENST00000404816 PABPN1Q86U42 306 aaKnown RBP eCLIP24.94■■□□□ 1.58
LTBP1-203ENST00000404816 IRX6P78412 446 aaPredicted RBP24.93■■□□□ 1.58
LTBP1-203ENST00000404816 HNRNPUQ00839 825 aaKnown RBP eCLIP24.87■■□□□ 1.57
LTBP1-203ENST00000404816 ANP32BQ92688 251 aaKnown RBP24.85■■□□□ 1.57
LTBP1-203ENST00000404816 SALL2Q9Y467 1007 aaPredicted RBP24.84■■□□□ 1.57
LTBP1-203ENST00000404816 FAM9BQ8IZU0 186 aa24.82■■□□□ 1.56
LTBP1-203ENST00000404816 DDX10Q13206 875 aaKnown RBP24.79■■□□□ 1.56
LTBP1-203ENST00000404816 HSP90AA1P07900 732 aaKnown RBP24.79■■□□□ 1.56
LTBP1-203ENST00000404816 ARID3CA6NKF2 412 aa24.76■■□□□ 1.55
LTBP1-203ENST00000404816 RTN4Q9NQC3 1192 aaKnown RBP24.75■■□□□ 1.55
LTBP1-203ENST00000404816 FBLN2P98095 1184 aa24.72■■□□□ 1.55
LTBP1-203ENST00000404816 MIER1Q8N108 512 aa24.72■■□□□ 1.55
LTBP1-203ENST00000404816 PLPPR3Q6T4P5 718 aa24.69■■□□□ 1.54
LTBP1-203ENST00000404816 CCDC136Q96JN2 1154 aa24.67■■□□□ 1.54
LTBP1-203ENST00000404816 ANP32EQ9BTT0 268 aa24.67■■□□□ 1.54
LTBP1-203ENST00000404816 NEFMP07197 916 aa24.63■■□□□ 1.53
LTBP1-203ENST00000404816 P3H3Q8IVL6 736 aa24.6■■□□□ 1.53
LTBP1-203ENST00000404816 UPF2Q9HAU5 1272 aaKnown RBP24.56■■□□□ 1.52
LTBP1-203ENST00000404816 HIRIP3Q9BW71 556 aaPredicted RBP24.53■■□□□ 1.52
LTBP1-203ENST00000404816 SENP3-EIF4A1A0A087X0R7 540 aa24.49■■□□□ 1.51
LTBP1-203ENST00000404816 ZNF777Q9ULD5 760 aaPredicted RBP24.46■■□□□ 1.51
LTBP1-203ENST00000404816 CSRNP3Q8WYN3 585 aa24.39■■□□□ 1.5
LTBP1-203ENST00000404816 ESF1Q9H501 851 aaKnown RBP24.38■■□□□ 1.49
LTBP1-203ENST00000404816 TONSLQ96HA7 1378 aa24.38■■□□□ 1.49
LTBP1-203ENST00000404816 CDK11BP21127 795 aaKnown RBP24.38■■□□□ 1.49
LTBP1-203ENST00000404816 SCRIBQ14160 1630 aa24.36■■□□□ 1.49
LTBP1-203ENST00000404816 LAS1LQ9Y4W2 734 aaKnown RBP24.34■■□□□ 1.49
LTBP1-203ENST00000404816 MRS2Q9HD23 443 aa24.32■■□□□ 1.48
LTBP1-203ENST00000404816 CHGAP10645 457 aaKnown RBP24.3■■□□□ 1.48
LTBP1-203ENST00000404816 TMC1Q8TDI8 760 aa24.29■■□□□ 1.48
LTBP1-203ENST00000404816 DCAF1Q9Y4B6 1507 aa24.29■■□□□ 1.48
LTBP1-203ENST00000404816 NAP1L5Q96NT1 182 aaPredicted RBP24.29■■□□□ 1.48
LTBP1-203ENST00000404816 TRIM44Q96DX7 344 aaPredicted RBP24.28■■□□□ 1.48
LTBP1-203ENST00000404816 ZCCHC6Q5VYS8 1495 aaKnown RBP24.28■■□□□ 1.48
LTBP1-203ENST00000404816 A0A0G2JS52 829 aa24.25■■□□□ 1.47
LTBP1-203ENST00000404816 TPRNQ4KMQ1 711 aa24.23■■□□□ 1.47
LTBP1-203ENST00000404816 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.21■■□□□ 1.47
LTBP1-203ENST00000404816 SUPT16HQ9Y5B9 1047 aaKnown RBP24.19■■□□□ 1.46
LTBP1-203ENST00000404816 AMER1Q5JTC6 1135 aaPredicted RBP24.18■■□□□ 1.46
LTBP1-203ENST00000404816 STAG3Q9UJ98 1225 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms