Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TBC1D3BA6NDS4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.64■■□□□ 1.85
TBC1D3BA6NDS4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TBC1D3BA6NDS4 LINC00273-201ENST00000539813 1452 ntBASIC26.63■■□□□ 1.85
TBC1D3BA6NDS4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TBC1D3BA6NDS4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TBC1D3BA6NDS4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TBC1D3BA6NDS4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
TBC1D3BA6NDS4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TBC1D3BA6NDS4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TBC1D3BA6NDS4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TBC1D3BA6NDS4 HSD17B1P1-201ENST00000590052 955 ntBASIC26.6■■□□□ 1.85
TBC1D3BA6NDS4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.59■■□□□ 1.85
TBC1D3BA6NDS4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.59■■□□□ 1.85
TBC1D3BA6NDS4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.59■■□□□ 1.85
TBC1D3BA6NDS4 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.58■■□□□ 1.85
TBC1D3BA6NDS4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
TBC1D3BA6NDS4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.58■■□□□ 1.84
TBC1D3BA6NDS4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TBC1D3BA6NDS4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TBC1D3BA6NDS4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TBC1D3BA6NDS4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
TBC1D3BA6NDS4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
TBC1D3BA6NDS4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
TBC1D3BA6NDS4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TBC1D3BA6NDS4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.53■■□□□ 1.84
TBC1D3BA6NDS4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.53■■□□□ 1.84
TBC1D3BA6NDS4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TBC1D3BA6NDS4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TBC1D3BA6NDS4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TBC1D3BA6NDS4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
TBC1D3BA6NDS4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
TBC1D3BA6NDS4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
TBC1D3BA6NDS4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
TBC1D3BA6NDS4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.51■■□□□ 1.83
TBC1D3BA6NDS4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
TBC1D3BA6NDS4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TBC1D3BA6NDS4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.5■■□□□ 1.83
TBC1D3BA6NDS4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.5■■□□□ 1.83
TBC1D3BA6NDS4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TBC1D3BA6NDS4 AC127502.1-201ENST00000399971 1502 ntBASIC26.49■■□□□ 1.83
TBC1D3BA6NDS4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.49■■□□□ 1.83
TBC1D3BA6NDS4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
TBC1D3BA6NDS4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
TBC1D3BA6NDS4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TBC1D3BA6NDS4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.48■■□□□ 1.83
TBC1D3BA6NDS4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.47■■□□□ 1.83
TBC1D3BA6NDS4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TBC1D3BA6NDS4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TBC1D3BA6NDS4 AL135925.1-201ENST00000605920 1701 ntBASIC26.47■■□□□ 1.83
TBC1D3BA6NDS4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TBC1D3BA6NDS4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TBC1D3BA6NDS4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TBC1D3BA6NDS4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TBC1D3BA6NDS4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TBC1D3BA6NDS4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TBC1D3BA6NDS4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
TBC1D3BA6NDS4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
TBC1D3BA6NDS4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
TBC1D3BA6NDS4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.44■■□□□ 1.82
TBC1D3BA6NDS4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TBC1D3BA6NDS4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.42■■□□□ 1.82
TBC1D3BA6NDS4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
TBC1D3BA6NDS4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
TBC1D3BA6NDS4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
TBC1D3BA6NDS4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
TBC1D3BA6NDS4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TBC1D3BA6NDS4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TBC1D3BA6NDS4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.39■■□□□ 1.82
TBC1D3BA6NDS4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
TBC1D3BA6NDS4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
TBC1D3BA6NDS4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.39■■□□□ 1.82
TBC1D3BA6NDS4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.39■■□□□ 1.82
TBC1D3BA6NDS4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
TBC1D3BA6NDS4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
TBC1D3BA6NDS4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
TBC1D3BA6NDS4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.38■■□□□ 1.81
TBC1D3BA6NDS4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TBC1D3BA6NDS4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TBC1D3BA6NDS4 AC135983.2-203ENST00000454486 1613 ntBASIC26.37■■□□□ 1.81
TBC1D3BA6NDS4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
TBC1D3BA6NDS4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.37■■□□□ 1.81
TBC1D3BA6NDS4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
TBC1D3BA6NDS4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
TBC1D3BA6NDS4 WHAMMP2-203ENST00000563942 1603 ntBASIC26.36■■□□□ 1.81
TBC1D3BA6NDS4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.36■■□□□ 1.81
TBC1D3BA6NDS4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
TBC1D3BA6NDS4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
TBC1D3BA6NDS4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
TBC1D3BA6NDS4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.35■■□□□ 1.81
TBC1D3BA6NDS4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
TBC1D3BA6NDS4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.35■■□□□ 1.81
TBC1D3BA6NDS4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TBC1D3BA6NDS4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TBC1D3BA6NDS4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.33■■□□□ 1.81
TBC1D3BA6NDS4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TBC1D3BA6NDS4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TBC1D3BA6NDS4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
TBC1D3BA6NDS4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
TBC1D3BA6NDS4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms