Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 SETD8P1-201ENST00000623146 1180 ntBASIC19.16■□□□□ 0.66
TRAV21A0A0B4J279 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV21A0A0B4J279 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV21A0A0B4J279 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV21A0A0B4J279 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRAV21A0A0B4J279 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV21A0A0B4J279 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAV21A0A0B4J279 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV21A0A0B4J279 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV21A0A0B4J279 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV21A0A0B4J279 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV21A0A0B4J279 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV21A0A0B4J279 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV21A0A0B4J279 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV21A0A0B4J279 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRAV21A0A0B4J279 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV21A0A0B4J279 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV21A0A0B4J279 AP004833.2-201ENST00000532228 1454 ntBASIC19.12■□□□□ 0.65
TRAV21A0A0B4J279 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV21A0A0B4J279 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
TRAV21A0A0B4J279 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV21A0A0B4J279 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV21A0A0B4J279 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRAV21A0A0B4J279 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV21A0A0B4J279 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV21A0A0B4J279 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV21A0A0B4J279 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV21A0A0B4J279 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV21A0A0B4J279 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAV21A0A0B4J279 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV21A0A0B4J279 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV21A0A0B4J279 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.08■□□□□ 0.65
TRAV21A0A0B4J279 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
TRAV21A0A0B4J279 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV21A0A0B4J279 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV21A0A0B4J279 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV21A0A0B4J279 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV21A0A0B4J279 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV21A0A0B4J279 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV21A0A0B4J279 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV21A0A0B4J279 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV21A0A0B4J279 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV21A0A0B4J279 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV21A0A0B4J279 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV21A0A0B4J279 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV21A0A0B4J279 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV21A0A0B4J279 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV21A0A0B4J279 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV21A0A0B4J279 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV21A0A0B4J279 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV21A0A0B4J279 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TRAV21A0A0B4J279 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.05■□□□□ 0.64
TRAV21A0A0B4J279 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.05■□□□□ 0.64
TRAV21A0A0B4J279 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV21A0A0B4J279 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV21A0A0B4J279 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAV21A0A0B4J279 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
TRAV21A0A0B4J279 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV21A0A0B4J279 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV21A0A0B4J279 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV21A0A0B4J279 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV21A0A0B4J279 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV21A0A0B4J279 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV21A0A0B4J279 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAV21A0A0B4J279 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TRAV21A0A0B4J279 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRAV21A0A0B4J279 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV21A0A0B4J279 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
TRAV21A0A0B4J279 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV21A0A0B4J279 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV21A0A0B4J279 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TRAV21A0A0B4J279 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV21A0A0B4J279 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV21A0A0B4J279 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV21A0A0B4J279 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
TRAV21A0A0B4J279 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TRAV21A0A0B4J279 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV21A0A0B4J279 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV21A0A0B4J279 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.01■□□□□ 0.63
TRAV21A0A0B4J279 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV21A0A0B4J279 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV21A0A0B4J279 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV21A0A0B4J279 AL391121.1-201ENST00000607967 1349 ntBASIC19■□□□□ 0.63
TRAV21A0A0B4J279 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV21A0A0B4J279 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV21A0A0B4J279 BX255925.1-201ENST00000566954 1854 ntBASIC19■□□□□ 0.63
TRAV21A0A0B4J279 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV21A0A0B4J279 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV21A0A0B4J279 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
TRAV21A0A0B4J279 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV21A0A0B4J279 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV21A0A0B4J279 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV21A0A0B4J279 AL121749.1-202ENST00000609313 2153 ntBASIC18.99■□□□□ 0.63
TRAV21A0A0B4J279 AC127502.1-201ENST00000399971 1502 ntBASIC18.99■□□□□ 0.63
TRAV21A0A0B4J279 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV21A0A0B4J279 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV21A0A0B4J279 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV21A0A0B4J279 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TRAV21A0A0B4J279 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV21A0A0B4J279 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms