Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV34A0A0B4J273 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV34A0A0B4J273 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.85■□□□□ 0.77
TRAV34A0A0B4J273 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TRAV34A0A0B4J273 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV34A0A0B4J273 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV34A0A0B4J273 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV34A0A0B4J273 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TRAV34A0A0B4J273 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TRAV34A0A0B4J273 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV34A0A0B4J273 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV34A0A0B4J273 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV34A0A0B4J273 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV34A0A0B4J273 AL031258.1-201ENST00000623562 325 ntBASIC19.81■□□□□ 0.76
TRAV34A0A0B4J273 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV34A0A0B4J273 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV34A0A0B4J273 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV34A0A0B4J273 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV34A0A0B4J273 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV34A0A0B4J273 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV34A0A0B4J273 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAV34A0A0B4J273 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV34A0A0B4J273 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV34A0A0B4J273 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV34A0A0B4J273 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV34A0A0B4J273 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV34A0A0B4J273 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV34A0A0B4J273 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV34A0A0B4J273 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TRAV34A0A0B4J273 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV34A0A0B4J273 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV34A0A0B4J273 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV34A0A0B4J273 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
TRAV34A0A0B4J273 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV34A0A0B4J273 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV34A0A0B4J273 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV34A0A0B4J273 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAV34A0A0B4J273 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV34A0A0B4J273 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRAV34A0A0B4J273 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV34A0A0B4J273 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV34A0A0B4J273 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV34A0A0B4J273 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV34A0A0B4J273 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV34A0A0B4J273 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV34A0A0B4J273 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV34A0A0B4J273 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV34A0A0B4J273 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV34A0A0B4J273 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV34A0A0B4J273 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV34A0A0B4J273 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TRAV34A0A0B4J273 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV34A0A0B4J273 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV34A0A0B4J273 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV34A0A0B4J273 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV34A0A0B4J273 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRAV34A0A0B4J273 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAV34A0A0B4J273 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV34A0A0B4J273 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV34A0A0B4J273 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV34A0A0B4J273 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV34A0A0B4J273 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRAV34A0A0B4J273 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV34A0A0B4J273 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV34A0A0B4J273 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.71■□□□□ 0.75
TRAV34A0A0B4J273 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV34A0A0B4J273 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV34A0A0B4J273 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV34A0A0B4J273 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV34A0A0B4J273 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV34A0A0B4J273 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV34A0A0B4J273 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV34A0A0B4J273 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV34A0A0B4J273 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRAV34A0A0B4J273 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV34A0A0B4J273 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAV34A0A0B4J273 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TRAV34A0A0B4J273 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV34A0A0B4J273 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV34A0A0B4J273 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV34A0A0B4J273 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAV34A0A0B4J273 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAV34A0A0B4J273 WASH5P-204ENST00000632292 975 ntBASIC19.67■□□□□ 0.74
TRAV34A0A0B4J273 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAV34A0A0B4J273 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAV34A0A0B4J273 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
TRAV34A0A0B4J273 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV34A0A0B4J273 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV34A0A0B4J273 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV34A0A0B4J273 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV34A0A0B4J273 AC010864.1-201ENST00000609407 1511 ntBASIC19.66■□□□□ 0.74
TRAV34A0A0B4J273 BX255925.1-201ENST00000566954 1854 ntBASIC19.65■□□□□ 0.74
TRAV34A0A0B4J273 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV34A0A0B4J273 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TRAV34A0A0B4J273 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV34A0A0B4J273 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TRAV34A0A0B4J273 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV34A0A0B4J273 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV34A0A0B4J273 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV34A0A0B4J273 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms