Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAV8-3A0A0A6YYJ7 AL135925.1-201ENST00000605920 1701 ntBASIC18.08■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 SUZ12P1-203ENST00000578195 985 ntBASIC18.06■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-3A0A0A6YYJ7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 AL121749.1-202ENST00000609313 2153 ntBASIC18■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 HNRNPLP2-201ENST00000568980 1570 ntBASIC18■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.98■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 DRD5P2-201ENST00000421395 2012 ntBASIC17.98■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC17.97■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 AP006261.1-201ENST00000584783 668 ntBASIC17.96■□□□□ 0.47
TRAV8-3A0A0A6YYJ7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 AL139393.2-201ENST00000608721 2025 ntBASIC17.95■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 MIR762-201ENST00000390236 83 ntBASIC17.95■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 AC135731.1-201ENST00000569415 2548 ntBASIC17.93■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms