Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.6■□□□□ 0.89
PABPC1P11940 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.6■□□□□ 0.89
PABPC1P11940 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PABPC1P11940 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.6■□□□□ 0.89
PABPC1P11940 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PABPC1P11940 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.6■□□□□ 0.89
PABPC1P11940 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.6■□□□□ 0.89
PABPC1P11940 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
PABPC1P11940 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PABPC1P11940 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.6■□□□□ 0.89
PABPC1P11940 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.59■□□□□ 0.89
PABPC1P11940 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PABPC1P11940 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PABPC1P11940 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PABPC1P11940 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PABPC1P11940 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PABPC1P11940 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PABPC1P11940 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.59■□□□□ 0.89
PABPC1P11940 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PABPC1P11940 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PABPC1P11940 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.59■□□□□ 0.89
PABPC1P11940 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PABPC1P11940 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.58■□□□□ 0.89
PABPC1P11940 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PABPC1P11940 FP700111.2-201ENST00000619190 1892 ntBASIC20.58■□□□□ 0.89
PABPC1P11940 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.58■□□□□ 0.89
PABPC1P11940 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PABPC1P11940 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.58■□□□□ 0.89
PABPC1P11940 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PABPC1P11940 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.58■□□□□ 0.89
PABPC1P11940 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PABPC1P11940 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PABPC1P11940 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PABPC1P11940 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.58■□□□□ 0.89
PABPC1P11940 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.58■□□□□ 0.89
PABPC1P11940 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PABPC1P11940 FAM197Y4-202ENST00000622692 608 ntBASIC20.58■□□□□ 0.89
PABPC1P11940 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.58■□□□□ 0.89
PABPC1P11940 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.58■□□□□ 0.89
PABPC1P11940 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PABPC1P11940 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PABPC1P11940 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.58■□□□□ 0.88
PABPC1P11940 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PABPC1P11940 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.57■□□□□ 0.88
PABPC1P11940 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PABPC1P11940 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PABPC1P11940 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
PABPC1P11940 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PABPC1P11940 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PABPC1P11940 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PABPC1P11940 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PABPC1P11940 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PABPC1P11940 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PABPC1P11940 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PABPC1P11940 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PABPC1P11940 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PABPC1P11940 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.57■□□□□ 0.88
PABPC1P11940 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.57■□□□□ 0.88
PABPC1P11940 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.57■□□□□ 0.88
PABPC1P11940 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PABPC1P11940 AC007375.3-201ENST00000600936 2314 ntBASIC20.57■□□□□ 0.88
PABPC1P11940 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
PABPC1P11940 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PABPC1P11940 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PABPC1P11940 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PABPC1P11940 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PABPC1P11940 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PABPC1P11940 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PABPC1P11940 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.57■□□□□ 0.88
PABPC1P11940 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PABPC1P11940 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PABPC1P11940 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PABPC1P11940 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PABPC1P11940 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PABPC1P11940 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PABPC1P11940 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PABPC1P11940 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.56■□□□□ 0.88
PABPC1P11940 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.56■□□□□ 0.88
PABPC1P11940 UBE2SP1-201ENST00000450587 669 ntBASIC20.56■□□□□ 0.88
PABPC1P11940 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.56■□□□□ 0.88
PABPC1P11940 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.56■□□□□ 0.88
PABPC1P11940 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PABPC1P11940 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.56■□□□□ 0.88
PABPC1P11940 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.56■□□□□ 0.88
PABPC1P11940 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.56■□□□□ 0.88
PABPC1P11940 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.56■□□□□ 0.88
PABPC1P11940 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PABPC1P11940 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.56■□□□□ 0.88
PABPC1P11940 MTDHP1-201ENST00000605323 784 ntBASIC20.56■□□□□ 0.88
PABPC1P11940 AC005229.4-201ENST00000610085 2198 ntBASIC20.56■□□□□ 0.88
PABPC1P11940 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PABPC1P11940 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.56■□□□□ 0.88
PABPC1P11940 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PABPC1P11940 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PABPC1P11940 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.56■□□□□ 0.88
PABPC1P11940 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.55■□□□□ 0.88
PABPC1P11940 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PABPC1P11940 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.55■□□□□ 0.88
PABPC1P11940 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PABPC1P11940 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms