RNA–Protein interactions for RNA: ENST00000532559.1

RHOD-202, Transcript of ras homolog family member D, humanhuman

TSL 3 BASIC

Gene RHOD, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOD-202ENST00000532559 NISCHQ9Y2I1 1504 aa49.57■■■■■ 5.53
RHOD-202ENST00000532559 CCDC180Q9P1Z9 1646 aa44.49■■■■■ 4.71
RHOD-202ENST00000532559 ABCC9O60706 1549 aa44.36■■■■■ 4.69
RHOD-202ENST00000532559 RB1CC1Q8TDY2 1594 aa42.26■■■■■ 4.36
RHOD-202ENST00000532559 NACADO15069 1562 aa41.98■■■■■ 4.31
RHOD-202ENST00000532559 DCAF8L2P0C7V8 631 aa41.73■■■■■ 4.27
RHOD-202ENST00000532559 DNAJC5BQ9UF47 199 aa41.5■■■■■ 4.23
RHOD-202ENST00000532559 UNC13AQ9UPW8 1703 aa41.43■■■■■ 4.22
RHOD-202ENST00000532559 MYO15BQ96JP2 1530 aa41.41■■■■■ 4.22
RHOD-202ENST00000532559 PABPN1Q86U42 306 aaKnown RBP eCLIP41.28■■■■■ 4.2
RHOD-202ENST00000532559 ZCCHC6Q5VYS8 1495 aaKnown RBP41.13■■■■■ 4.17
RHOD-202ENST00000532559 BICRAQ9NZM4 1560 aa41.08■■■■■ 4.17
RHOD-202ENST00000532559 DCAF1Q9Y4B6 1507 aa40.93■■■■■ 4.14
RHOD-202ENST00000532559 SCRIBQ14160 1630 aa40.56■■■■■ 4.08
RHOD-202ENST00000532559 SHROOM4Q9ULL8 1493 aa40.45■■■■■ 4.07
RHOD-202ENST00000532559 CC2D2AQ9P2K1 1620 aa40.11■■■■■ 4.01
RHOD-202ENST00000532559 EIF4G1Q04637 1599 aaKnown RBP40.04■■■■■ 4
RHOD-202ENST00000532559 CECR2Q9BXF3 1484 aa39.93■■■■□ 3.98
RHOD-202ENST00000532559 NCAPD3P42695 1498 aa38.73■■■■□ 3.79
RHOD-202ENST00000532559 SMARCA4P51532 1647 aa38.69■■■■□ 3.78
RHOD-202ENST00000532559 ATAD2BQ9ULI0 1458 aa38.66■■■■□ 3.78
RHOD-202ENST00000532559 SMARCA2P51531 1590 aa38.55■■■■□ 3.76
RHOD-202ENST00000532559 HMGXB3Q12766 1538 aa38.5■■■■□ 3.75
RHOD-202ENST00000532559 BAZ1AQ9NRL2 1556 aaPredicted RBP38.47■■■■□ 3.75
RHOD-202ENST00000532559 BAZ1BQ9UIG0 1483 aaKnown RBP38.29■■■■□ 3.72
RHOD-202ENST00000532559 PEG3Q9GZU2 1588 aa38.29■■■■□ 3.72
RHOD-202ENST00000532559 ERCC6Q03468 1493 aa38.27■■■■□ 3.72
RHOD-202ENST00000532559 MROH2BQ7Z745 1585 aa38.23■■■■□ 3.71
RHOD-202ENST00000532559 NESP48681 1621 aa38.16■■■■□ 3.7
RHOD-202ENST00000532559 CUX2O14529 1486 aa38.15■■■■□ 3.7
RHOD-202ENST00000532559 DNAJC5Q9H3Z4 198 aa37.98■■■■□ 3.67
RHOD-202ENST00000532559 LAMC3Q9Y6N6 1575 aa37.89■■■■□ 3.66
RHOD-202ENST00000532559 WIZO95785 1651 aa37.8■■■■□ 3.64
RHOD-202ENST00000532559 THOC2Q8NI27 1593 aaKnown RBP37.79■■■■□ 3.64
RHOD-202ENST00000532559 KIF21AQ7Z4S6 1674 aa37.72■■■■□ 3.63
RHOD-202ENST00000532559 PDS5BQ9NTI5 1447 aa37.61■■■■□ 3.61
RHOD-202ENST00000532559 CADPSQ9ULU8 1353 aa37.55■■■■□ 3.6
RHOD-202ENST00000532559 RSF1Q96T23 1441 aaPredicted RBP37.43■■■■□ 3.58
RHOD-202ENST00000532559 MRC2Q9UBG0 1479 aa37.33■■■■□ 3.57
RHOD-202ENST00000532559 TOP2AP11388 1531 aaKnown RBP37.3■■■■□ 3.56
RHOD-202ENST00000532559 WDR62O43379 1518 aa37.26■■■■□ 3.55
RHOD-202ENST00000532559 CEP164Q9UPV0 1460 aa37.2■■■■□ 3.54
RHOD-202ENST00000532559 CFTRP13569 1480 aa37.17■■■■□ 3.54
RHOD-202ENST00000532559 FANCD2Q9BXW9 1451 aa37.16■■■■□ 3.54
RHOD-202ENST00000532559 PRDM2Q13029 1718 aa36.92■■■■□ 3.5
RHOD-202ENST00000532559 URB2Q14146 1524 aaKnown RBP36.88■■■■□ 3.49
RHOD-202ENST00000532559 CCDC88BA6NC98 1476 aa36.85■■■■□ 3.49
RHOD-202ENST00000532559 TOPBP1Q92547 1522 aa36.49■■■■□ 3.43
RHOD-202ENST00000532559 IFT140Q96RY7 1462 aa36.43■■■■□ 3.42
RHOD-202ENST00000532559 ZNF608Q9ULD9 1512 aaPredicted RBP36.4■■■■□ 3.42
RHOD-202ENST00000532559 TRIM41Q8WV44 630 aa36.4■■■■□ 3.42
RHOD-202ENST00000532559 DNMBPQ6XZF7 1577 aa36.37■■■■□ 3.41
RHOD-202ENST00000532559 OSCARQ8IYS5 282 aa36.37■■■■□ 3.41
RHOD-202ENST00000532559 ABCC8Q09428 1581 aa36.36■■■■□ 3.41
RHOD-202ENST00000532559 EIF4G3O43432 1585 aaKnown RBP36.24■■■■□ 3.39
RHOD-202ENST00000532559 TARBP1Q13395 1621 aaKnown RBP36.19■■■■□ 3.38
RHOD-202ENST00000532559 POLA1P09884 1462 aaPredicted RBP36.11■■■■□ 3.37
RHOD-202ENST00000532559 AQRO60306 1485 aaKnown RBP eCLIP36.06■■■■□ 3.36
RHOD-202ENST00000532559 RIMBP3CA6NJZ7 1639 aa36.01■■■■□ 3.36
RHOD-202ENST00000532559 RIMBP3BA6NNM3 1639 aa36.01■■■■□ 3.36
RHOD-202ENST00000532559 RIMBP3Q9UFD9 1639 aa36.01■■■■□ 3.36
RHOD-202ENST00000532559 CHD1O14646 1710 aa35.99■■■■□ 3.35
RHOD-202ENST00000532559 RAD54L2Q9Y4B4 1467 aa35.99■■■■□ 3.35
RHOD-202ENST00000532559 CUX1P39880 1505 aa35.92■■■■□ 3.34
RHOD-202ENST00000532559 FGD5Q6ZNL6 1462 aa35.91■■■■□ 3.34
RHOD-202ENST00000532559 SOGA1O94964 1423 aa35.91■■■■□ 3.34
RHOD-202ENST00000532559 ARHGEF11O15085 1522 aa35.88■■■■□ 3.33
RHOD-202ENST00000532559 TDRD9Q8NDG6 1382 aaKnown RBP35.84■■■■□ 3.33
RHOD-202ENST00000532559 SUPT5HO00267 1087 aaKnown RBP35.81■■■■□ 3.32
RHOD-202ENST00000532559 WDR97A6NE52 1622 aa35.78■■■■□ 3.32
RHOD-202ENST00000532559 FBLN2P98095 1184 aa35.76■■■■□ 3.32
RHOD-202ENST00000532559 SNAPC4Q5SXM2 1469 aa35.72■■■■□ 3.31
RHOD-202ENST00000532559 GRIN2BQ13224 1484 aa35.6■■■■□ 3.29
RHOD-202ENST00000532559 MAGI1Q96QZ7 1491 aaPredicted RBP35.6■■■■□ 3.29
RHOD-202ENST00000532559 PBRM1Q86U86 1689 aa35.57■■■■□ 3.28
RHOD-202ENST00000532559 ARAP1Q96P48 1450 aa35.54■■■■□ 3.28
RHOD-202ENST00000532559 CYB5RLQ6IPT4 315 aa35.54■■■■□ 3.28
RHOD-202ENST00000532559 CLASP1Q7Z460 1538 aa35.53■■■■□ 3.28
RHOD-202ENST00000532559 GAPVD1Q14C86 1478 aa35.5■■■■□ 3.27
RHOD-202ENST00000532559 ABCA10Q8WWZ4 1543 aa35.49■■■■□ 3.27
RHOD-202ENST00000532559 CHMP7Q8WUX9 453 aaPredicted RBP35.49■■■■□ 3.27
RHOD-202ENST00000532559 SYNJ1O43426 1573 aa35.49■■■■□ 3.27
RHOD-202ENST00000532559 SYNJ2O15056 1496 aa35.48■■■■□ 3.27
RHOD-202ENST00000532559 ABCA5Q8WWZ7 1642 aa35.48■■■■□ 3.27
RHOD-202ENST00000532559 BIVM-ERCC5R4GMW8 1640 aa35.39■■■■□ 3.26
RHOD-202ENST00000532559 TOP2BQ02880 1626 aa35.35■■■■□ 3.25
RHOD-202ENST00000532559 WRNQ14191 1432 aaPredicted RBP eCLIP35.33■■■■□ 3.25
RHOD-202ENST00000532559 ADAMTS12P58397 1594 aa35.21■■■■□ 3.23
RHOD-202ENST00000532559 GRIN2AQ12879 1464 aa35.17■■■■□ 3.22
RHOD-202ENST00000532559 TRHP20396 242 aaPredicted RBP35.11■■■■□ 3.21
RHOD-202ENST00000532559 CEP170Q5SW79 1584 aa35.08■■■■□ 3.21
RHOD-202ENST00000532559 ERICH3Q5RHP9 1530 aa35.05■■■■□ 3.2
RHOD-202ENST00000532559 NUP160Q12769 1436 aa35.04■■■■□ 3.2
RHOD-202ENST00000532559 FHAD1B1AJZ9 1412 aa35.03■■■■□ 3.2
RHOD-202ENST00000532559 ERCC6L2Q5T890 1561 aa35.01■■■■□ 3.2
RHOD-202ENST00000532559 SHROOM2Q13796 1616 aa34.92■■■■□ 3.18
RHOD-202ENST00000532559 RUSC2Q8N2Y8 1516 aa34.72■■■■□ 3.15
RHOD-202ENST00000532559 PRG4Q92954 1404 aaPredicted RBP34.68■■■■□ 3.14
RHOD-202ENST00000532559 JPH4Q96JJ6 628 aa34.62■■■■□ 3.13
RHOD-202ENST00000532559 KIF27Q86VH2 1401 aa34.61■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms