RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 NISCHQ9Y2I1 1504 aa47.91■■■■■ 5.26
SCAMP3-201ENST00000302631 CCDC180Q9P1Z9 1646 aa42.39■■■■■ 4.38
SCAMP3-201ENST00000302631 ABCC9O60706 1549 aa40.82■■■■■ 4.13
SCAMP3-201ENST00000302631 ZCCHC6Q5VYS8 1495 aaKnown RBP40.03■■■■■ 4
SCAMP3-201ENST00000302631 DCAF1Q9Y4B6 1507 aa39.73■■■■□ 3.95
SCAMP3-201ENST00000302631 MYO15BQ96JP2 1530 aa39.71■■■■□ 3.95
SCAMP3-201ENST00000302631 NACADO15069 1562 aa39.7■■■■□ 3.95
SCAMP3-201ENST00000302631 DCAF8L2P0C7V8 631 aa39.6■■■■□ 3.93
SCAMP3-201ENST00000302631 RB1CC1Q8TDY2 1594 aa39.58■■■■□ 3.93
SCAMP3-201ENST00000302631 UNC13AQ9UPW8 1703 aa38.76■■■■□ 3.8
SCAMP3-201ENST00000302631 SCRIBQ14160 1630 aa38.6■■■■□ 3.77
SCAMP3-201ENST00000302631 BICRAQ9NZM4 1560 aa38.42■■■■□ 3.74
SCAMP3-201ENST00000302631 PABPN1Q86U42 306 aaKnown RBP eCLIP38.21■■■■□ 3.71
SCAMP3-201ENST00000302631 SHROOM4Q9ULL8 1493 aa38.08■■■■□ 3.69
SCAMP3-201ENST00000302631 EIF4G1Q04637 1599 aaKnown RBP37.31■■■■□ 3.56
SCAMP3-201ENST00000302631 CECR2Q9BXF3 1484 aa37.23■■■■□ 3.55
SCAMP3-201ENST00000302631 BAZ1AQ9NRL2 1556 aaPredicted RBP37.08■■■■□ 3.53
SCAMP3-201ENST00000302631 SMARCA4P51532 1647 aa37.05■■■■□ 3.52
SCAMP3-201ENST00000302631 DNAJC5BQ9UF47 199 aa37.03■■■■□ 3.52
SCAMP3-201ENST00000302631 CC2D2AQ9P2K1 1620 aa37.02■■■■□ 3.52
SCAMP3-201ENST00000302631 MROH2BQ7Z745 1585 aa36.91■■■■□ 3.5
SCAMP3-201ENST00000302631 PEG3Q9GZU2 1588 aa36.75■■■■□ 3.47
SCAMP3-201ENST00000302631 ATAD2BQ9ULI0 1458 aa36.71■■■■□ 3.47
SCAMP3-201ENST00000302631 RSF1Q96T23 1441 aaPredicted RBP36.7■■■■□ 3.47
SCAMP3-201ENST00000302631 SMARCA2P51531 1590 aa36.69■■■■□ 3.46
SCAMP3-201ENST00000302631 NCAPD3P42695 1498 aa36.64■■■■□ 3.46
SCAMP3-201ENST00000302631 WIZO95785 1651 aa36.53■■■■□ 3.44
SCAMP3-201ENST00000302631 HMGXB3Q12766 1538 aa36.5■■■■□ 3.43
SCAMP3-201ENST00000302631 BAZ1BQ9UIG0 1483 aaKnown RBP36.39■■■■□ 3.42
SCAMP3-201ENST00000302631 TOP2AP11388 1531 aaKnown RBP36.19■■■■□ 3.38
SCAMP3-201ENST00000302631 SUPT5HO00267 1087 aaKnown RBP36.02■■■■□ 3.36
SCAMP3-201ENST00000302631 CCDC88BA6NC98 1476 aa35.76■■■■□ 3.31
SCAMP3-201ENST00000302631 LAMC3Q9Y6N6 1575 aa35.56■■■■□ 3.28
SCAMP3-201ENST00000302631 CADPSQ9ULU8 1353 aa35.56■■■■□ 3.28
SCAMP3-201ENST00000302631 NESP48681 1621 aa35.52■■■■□ 3.28
SCAMP3-201ENST00000302631 CFTRP13569 1480 aa35.49■■■■□ 3.27
SCAMP3-201ENST00000302631 PRDM2Q13029 1718 aa35.31■■■■□ 3.24
SCAMP3-201ENST00000302631 PDS5BQ9NTI5 1447 aa35.26■■■■□ 3.24
SCAMP3-201ENST00000302631 KIF21AQ7Z4S6 1674 aa35.15■■■■□ 3.22
SCAMP3-201ENST00000302631 FANCD2Q9BXW9 1451 aa35.12■■■■□ 3.21
SCAMP3-201ENST00000302631 ERCC6Q03468 1493 aa35.11■■■■□ 3.21
SCAMP3-201ENST00000302631 CEP164Q9UPV0 1460 aa35.01■■■■□ 3.2
SCAMP3-201ENST00000302631 THOC2Q8NI27 1593 aaKnown RBP34.92■■■■□ 3.18
SCAMP3-201ENST00000302631 MRC2Q9UBG0 1479 aa34.87■■■■□ 3.17
SCAMP3-201ENST00000302631 WDR62O43379 1518 aa34.78■■■■□ 3.16
SCAMP3-201ENST00000302631 URB2Q14146 1524 aaKnown RBP34.76■■■■□ 3.16
SCAMP3-201ENST00000302631 ABCC8Q09428 1581 aa34.7■■■■□ 3.15
SCAMP3-201ENST00000302631 DNMBPQ6XZF7 1577 aa34.67■■■■□ 3.14
SCAMP3-201ENST00000302631 TOPBP1Q92547 1522 aa34.65■■■■□ 3.14
SCAMP3-201ENST00000302631 CUX2O14529 1486 aa34.64■■■■□ 3.14
SCAMP3-201ENST00000302631 CUX1P39880 1505 aa34.59■■■■□ 3.13
SCAMP3-201ENST00000302631 WRNQ14191 1432 aaPredicted RBP eCLIP34.54■■■■□ 3.12
SCAMP3-201ENST00000302631 BIVM-ERCC5R4GMW8 1640 aa34.47■■■■□ 3.11
SCAMP3-201ENST00000302631 TOP2BQ02880 1626 aa34.46■■■■□ 3.11
SCAMP3-201ENST00000302631 SYNJ1O43426 1573 aa34.45■■■■□ 3.11
SCAMP3-201ENST00000302631 POLA1P09884 1462 aaPredicted RBP34.39■■■■□ 3.1
SCAMP3-201ENST00000302631 FGD5Q6ZNL6 1462 aa34.36■■■■□ 3.09
SCAMP3-201ENST00000302631 IFT140Q96RY7 1462 aa34.29■■■■□ 3.08
SCAMP3-201ENST00000302631 TARBP1Q13395 1621 aaKnown RBP34.27■■■■□ 3.08
SCAMP3-201ENST00000302631 SOGA1O94964 1423 aa34.23■■■■□ 3.07
SCAMP3-201ENST00000302631 RAD54L2Q9Y4B4 1467 aa34.2■■■■□ 3.07
SCAMP3-201ENST00000302631 WDR97A6NE52 1622 aa34.13■■■■□ 3.05
SCAMP3-201ENST00000302631 ABCA10Q8WWZ4 1543 aa34.11■■■■□ 3.05
SCAMP3-201ENST00000302631 ZNF608Q9ULD9 1512 aaPredicted RBP34.07■■■■□ 3.05
SCAMP3-201ENST00000302631 CHIC1Q5VXU3 224 aa34.04■■■■□ 3.04
SCAMP3-201ENST00000302631 TRIM41Q8WV44 630 aa34.04■■■■□ 3.04
SCAMP3-201ENST00000302631 EIF4G3O43432 1585 aaKnown RBP33.97■■■■□ 3.03
SCAMP3-201ENST00000302631 TDRD9Q8NDG6 1382 aaKnown RBP33.95■■■■□ 3.03
SCAMP3-201ENST00000302631 AQRO60306 1485 aaKnown RBP eCLIP33.94■■■■□ 3.02
SCAMP3-201ENST00000302631 ABCA5Q8WWZ7 1642 aa33.92■■■■□ 3.02
SCAMP3-201ENST00000302631 GAPVD1Q14C86 1478 aa33.85■■■■□ 3.01
SCAMP3-201ENST00000302631 GRIN2BQ13224 1484 aa33.78■■■■□ 3
SCAMP3-201ENST00000302631 KIF27Q86VH2 1401 aa33.78■■■■□ 3
SCAMP3-201ENST00000302631 PBRM1Q86U86 1689 aa33.77■■■■□ 3
SCAMP3-201ENST00000302631 ERICH3Q5RHP9 1530 aa33.71■■■□□ 2.99
SCAMP3-201ENST00000302631 MAGI1Q96QZ7 1491 aaPredicted RBP33.65■■■□□ 2.98
SCAMP3-201ENST00000302631 RUSC2Q8N2Y8 1516 aa33.65■■■□□ 2.98
SCAMP3-201ENST00000302631 SNAPC4Q5SXM2 1469 aa33.64■■■□□ 2.98
SCAMP3-201ENST00000302631 IGF1RP08069 1367 aa33.62■■■□□ 2.97
SCAMP3-201ENST00000302631 ADAMTS12P58397 1594 aa33.53■■■□□ 2.96
SCAMP3-201ENST00000302631 EEA1Q15075 1411 aa33.53■■■□□ 2.96
SCAMP3-201ENST00000302631 SYNJ2O15056 1496 aa33.5■■■□□ 2.95
SCAMP3-201ENST00000302631 FHAD1B1AJZ9 1412 aa33.5■■■□□ 2.95
SCAMP3-201ENST00000302631 CUL7Q14999 1698 aa33.49■■■□□ 2.95
SCAMP3-201ENST00000302631 CHD1O14646 1710 aa33.45■■■□□ 2.95
SCAMP3-201ENST00000302631 CARMIL1Q5VZK9 1371 aa33.39■■■□□ 2.94
SCAMP3-201ENST00000302631 CHMP7Q8WUX9 453 aaPredicted RBP33.37■■■□□ 2.93
SCAMP3-201ENST00000302631 CSRNP3Q8WYN3 585 aa33.36■■■□□ 2.93
SCAMP3-201ENST00000302631 GRIN2AQ12879 1464 aa33.35■■■□□ 2.93
SCAMP3-201ENST00000302631 PRXQ9BXM0 1461 aa33.33■■■□□ 2.93
SCAMP3-201ENST00000302631 FBLN2P98095 1184 aa33.32■■■□□ 2.92
SCAMP3-201ENST00000302631 OSCARQ8IYS5 282 aa33.27■■■□□ 2.92
SCAMP3-201ENST00000302631 RAPGEF2Q9Y4G8 1499 aa33.26■■■□□ 2.92
SCAMP3-201ENST00000302631 FAM9AQ8IZU1 332 aaPredicted RBP33.25■■■□□ 2.91
SCAMP3-201ENST00000302631 NUP160Q12769 1436 aa33.22■■■□□ 2.91
SCAMP3-201ENST00000302631 CEP170Q5SW79 1584 aa33.17■■■□□ 2.9
SCAMP3-201ENST00000302631 KIF21BO75037 1637 aa33.15■■■□□ 2.9
SCAMP3-201ENST00000302631 CLASP1Q7Z460 1538 aa33.13■■■□□ 2.89
SCAMP3-201ENST00000302631 KIAA0586Q9BVV6 1533 aa33.01■■■□□ 2.88
SCAMP3-201ENST00000302631 CTTNBP2Q8WZ74 1663 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms