RNA–Protein interactions for RNA: ENST00000529992.5

SNX7-205, Transcript of sorting nexin 7, humanhuman

TSL 2 BASIC

Gene SNX7, Length 1,589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX7-205ENST00000529992 NISCHQ9Y2I1 1504 aa47.97■■■■■ 5.27
SNX7-205ENST00000529992 CCDC180Q9P1Z9 1646 aa42.44■■■■■ 4.38
SNX7-205ENST00000529992 ABCC9O60706 1549 aa41.15■■■■■ 4.18
SNX7-205ENST00000529992 ZCCHC6Q5VYS8 1495 aaKnown RBP40.06■■■■■ 4
SNX7-205ENST00000529992 DCAF8L2P0C7V8 631 aa39.88■■■■□ 3.97
SNX7-205ENST00000529992 NACADO15069 1562 aa39.75■■■■□ 3.95
SNX7-205ENST00000529992 RB1CC1Q8TDY2 1594 aa39.7■■■■□ 3.95
SNX7-205ENST00000529992 DCAF1Q9Y4B6 1507 aa39.65■■■■□ 3.94
SNX7-205ENST00000529992 MYO15BQ96JP2 1530 aa39.62■■■■□ 3.93
SNX7-205ENST00000529992 UNC13AQ9UPW8 1703 aa38.98■■■■□ 3.83
SNX7-205ENST00000529992 SCRIBQ14160 1630 aa38.84■■■■□ 3.81
SNX7-205ENST00000529992 BICRAQ9NZM4 1560 aa38.6■■■■□ 3.77
SNX7-205ENST00000529992 PABPN1Q86U42 306 aaKnown RBP eCLIP38.53■■■■□ 3.76
SNX7-205ENST00000529992 SHROOM4Q9ULL8 1493 aa38.23■■■■□ 3.71
SNX7-205ENST00000529992 EIF4G1Q04637 1599 aaKnown RBP37.49■■■■□ 3.59
SNX7-205ENST00000529992 DNAJC5BQ9UF47 199 aa37.42■■■■□ 3.58
SNX7-205ENST00000529992 CECR2Q9BXF3 1484 aa37.39■■■■□ 3.58
SNX7-205ENST00000529992 CC2D2AQ9P2K1 1620 aa37.25■■■■□ 3.55
SNX7-205ENST00000529992 SMARCA4P51532 1647 aa37.16■■■■□ 3.54
SNX7-205ENST00000529992 BAZ1AQ9NRL2 1556 aaPredicted RBP37.11■■■■□ 3.53
SNX7-205ENST00000529992 MROH2BQ7Z745 1585 aa37.03■■■■□ 3.52
SNX7-205ENST00000529992 ATAD2BQ9ULI0 1458 aa36.81■■■■□ 3.48
SNX7-205ENST00000529992 SMARCA2P51531 1590 aa36.74■■■■□ 3.47
SNX7-205ENST00000529992 PEG3Q9GZU2 1588 aa36.74■■■■□ 3.47
SNX7-205ENST00000529992 RSF1Q96T23 1441 aaPredicted RBP36.73■■■■□ 3.47
SNX7-205ENST00000529992 WIZO95785 1651 aa36.68■■■■□ 3.46
SNX7-205ENST00000529992 NCAPD3P42695 1498 aa36.68■■■■□ 3.46
SNX7-205ENST00000529992 HMGXB3Q12766 1538 aa36.56■■■■□ 3.44
SNX7-205ENST00000529992 BAZ1BQ9UIG0 1483 aaKnown RBP36.52■■■■□ 3.44
SNX7-205ENST00000529992 TOP2AP11388 1531 aaKnown RBP36.24■■■■□ 3.39
SNX7-205ENST00000529992 SUPT5HO00267 1087 aaKnown RBP36.13■■■■□ 3.37
SNX7-205ENST00000529992 CCDC88BA6NC98 1476 aa35.83■■■■□ 3.33
SNX7-205ENST00000529992 NESP48681 1621 aa35.79■■■■□ 3.32
SNX7-205ENST00000529992 LAMC3Q9Y6N6 1575 aa35.65■■■■□ 3.3
SNX7-205ENST00000529992 CADPSQ9ULU8 1353 aa35.63■■■■□ 3.29
SNX7-205ENST00000529992 CFTRP13569 1480 aa35.54■■■■□ 3.28
SNX7-205ENST00000529992 KIF21AQ7Z4S6 1674 aa35.39■■■■□ 3.26
SNX7-205ENST00000529992 PRDM2Q13029 1718 aa35.37■■■■□ 3.25
SNX7-205ENST00000529992 ERCC6Q03468 1493 aa35.37■■■■□ 3.25
SNX7-205ENST00000529992 PDS5BQ9NTI5 1447 aa35.35■■■■□ 3.25
SNX7-205ENST00000529992 FANCD2Q9BXW9 1451 aa35.26■■■■□ 3.24
SNX7-205ENST00000529992 CEP164Q9UPV0 1460 aa35.16■■■■□ 3.22
SNX7-205ENST00000529992 THOC2Q8NI27 1593 aaKnown RBP35.13■■■■□ 3.21
SNX7-205ENST00000529992 MRC2Q9UBG0 1479 aa35.02■■■■□ 3.2
SNX7-205ENST00000529992 URB2Q14146 1524 aaKnown RBP34.94■■■■□ 3.18
SNX7-205ENST00000529992 WDR62O43379 1518 aa34.92■■■■□ 3.18
SNX7-205ENST00000529992 CUX2O14529 1486 aa34.8■■■■□ 3.16
SNX7-205ENST00000529992 TOPBP1Q92547 1522 aa34.77■■■■□ 3.16
SNX7-205ENST00000529992 DNMBPQ6XZF7 1577 aa34.75■■■■□ 3.15
SNX7-205ENST00000529992 ABCC8Q09428 1581 aa34.73■■■■□ 3.15
SNX7-205ENST00000529992 CUX1P39880 1505 aa34.71■■■■□ 3.15
SNX7-205ENST00000529992 WRNQ14191 1432 aaPredicted RBP eCLIP34.58■■■■□ 3.13
SNX7-205ENST00000529992 SYNJ1O43426 1573 aa34.57■■■■□ 3.12
SNX7-205ENST00000529992 POLA1P09884 1462 aaPredicted RBP34.51■■■■□ 3.12
SNX7-205ENST00000529992 BIVM-ERCC5R4GMW8 1640 aa34.5■■■■□ 3.11
SNX7-205ENST00000529992 TOP2BQ02880 1626 aa34.5■■■■□ 3.11
SNX7-205ENST00000529992 FGD5Q6ZNL6 1462 aa34.49■■■■□ 3.11
SNX7-205ENST00000529992 TARBP1Q13395 1621 aaKnown RBP34.39■■■■□ 3.1
SNX7-205ENST00000529992 RAD54L2Q9Y4B4 1467 aa34.39■■■■□ 3.1
SNX7-205ENST00000529992 IFT140Q96RY7 1462 aa34.38■■■■□ 3.09
SNX7-205ENST00000529992 SOGA1O94964 1423 aa34.33■■■■□ 3.09
SNX7-205ENST00000529992 ZNF608Q9ULD9 1512 aaPredicted RBP34.29■■■■□ 3.08
SNX7-205ENST00000529992 WDR97A6NE52 1622 aa34.24■■■■□ 3.07
SNX7-205ENST00000529992 EIF4G3O43432 1585 aaKnown RBP34.17■■■■□ 3.06
SNX7-205ENST00000529992 ABCA10Q8WWZ4 1543 aa34.15■■■■□ 3.06
SNX7-205ENST00000529992 AQRO60306 1485 aaKnown RBP eCLIP34.13■■■■□ 3.05
SNX7-205ENST00000529992 TDRD9Q8NDG6 1382 aaKnown RBP34.12■■■■□ 3.05
SNX7-205ENST00000529992 TRIM41Q8WV44 630 aa34.03■■■■□ 3.04
SNX7-205ENST00000529992 ABCA5Q8WWZ7 1642 aa34.03■■■■□ 3.04
SNX7-205ENST00000529992 CHIC1Q5VXU3 224 aa33.98■■■■□ 3.03
SNX7-205ENST00000529992 GAPVD1Q14C86 1478 aa33.95■■■■□ 3.03
SNX7-205ENST00000529992 PBRM1Q86U86 1689 aa33.93■■■■□ 3.02
SNX7-205ENST00000529992 GRIN2BQ13224 1484 aa33.86■■■■□ 3.01
SNX7-205ENST00000529992 SNAPC4Q5SXM2 1469 aa33.82■■■■□ 3
SNX7-205ENST00000529992 KIF27Q86VH2 1401 aa33.79■■■■□ 3
SNX7-205ENST00000529992 RUSC2Q8N2Y8 1516 aa33.77■■■■□ 3
SNX7-205ENST00000529992 MAGI1Q96QZ7 1491 aaPredicted RBP33.73■■■□□ 2.99
SNX7-205ENST00000529992 ERICH3Q5RHP9 1530 aa33.73■■■□□ 2.99
SNX7-205ENST00000529992 CHD1O14646 1710 aa33.69■■■□□ 2.98
SNX7-205ENST00000529992 ADAMTS12P58397 1594 aa33.66■■■□□ 2.98
SNX7-205ENST00000529992 IGF1RP08069 1367 aa33.64■■■□□ 2.98
SNX7-205ENST00000529992 SYNJ2O15056 1496 aa33.6■■■□□ 2.97
SNX7-205ENST00000529992 FBLN2P98095 1184 aa33.58■■■□□ 2.97
SNX7-205ENST00000529992 FHAD1B1AJZ9 1412 aa33.54■■■□□ 2.96
SNX7-205ENST00000529992 CUL7Q14999 1698 aa33.53■■■□□ 2.96
SNX7-205ENST00000529992 CHMP7Q8WUX9 453 aaPredicted RBP33.52■■■□□ 2.96
SNX7-205ENST00000529992 GRIN2AQ12879 1464 aa33.46■■■□□ 2.95
SNX7-205ENST00000529992 CARMIL1Q5VZK9 1371 aa33.43■■■□□ 2.94
SNX7-205ENST00000529992 OSCARQ8IYS5 282 aa33.43■■■□□ 2.94
SNX7-205ENST00000529992 FAM9AQ8IZU1 332 aaPredicted RBP33.42■■■□□ 2.94
SNX7-205ENST00000529992 EEA1Q15075 1411 aa33.38■■■□□ 2.93
SNX7-205ENST00000529992 CEP170Q5SW79 1584 aa33.34■■■□□ 2.93
SNX7-205ENST00000529992 CSRNP3Q8WYN3 585 aa33.33■■■□□ 2.93
SNX7-205ENST00000529992 PRXQ9BXM0 1461 aa33.3■■■□□ 2.92
SNX7-205ENST00000529992 NUP160Q12769 1436 aa33.29■■■□□ 2.92
SNX7-205ENST00000529992 RAPGEF2Q9Y4G8 1499 aa33.28■■■□□ 2.92
SNX7-205ENST00000529992 CLASP1Q7Z460 1538 aa33.28■■■□□ 2.92
SNX7-205ENST00000529992 DNAJC5Q9H3Z4 198 aa33.23■■■□□ 2.91
SNX7-205ENST00000529992 KIF21BO75037 1637 aa33.11■■■□□ 2.89
SNX7-205ENST00000529992 KIAA0586Q9BVV6 1533 aa33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms