RNA–Protein interactions for RNA: ENST00000428165.1

LINC00708-201, long intergenic non-protein coding RNA 708, humanhuman

TSL 1 (best) BASIC

Gene LINC00708, Length 916 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00708-201ENST00000428165 NISCHQ9Y2I1 1504 aa48.87■■■■■ 5.41
LINC00708-201ENST00000428165 CCDC180Q9P1Z9 1646 aa43.63■■■■■ 4.58
LINC00708-201ENST00000428165 ABCC9O60706 1549 aa42.83■■■■■ 4.45
LINC00708-201ENST00000428165 RB1CC1Q8TDY2 1594 aa41.1■■■■■ 4.17
LINC00708-201ENST00000428165 NACADO15069 1562 aa40.96■■■■■ 4.15
LINC00708-201ENST00000428165 DCAF8L2P0C7V8 631 aa40.84■■■■■ 4.13
LINC00708-201ENST00000428165 ZCCHC6Q5VYS8 1495 aaKnown RBP40.69■■■■■ 4.1
LINC00708-201ENST00000428165 MYO15BQ96JP2 1530 aa40.6■■■■■ 4.09
LINC00708-201ENST00000428165 UNC13AQ9UPW8 1703 aa40.4■■■■■ 4.06
LINC00708-201ENST00000428165 DCAF1Q9Y4B6 1507 aa40.38■■■■■ 4.06
LINC00708-201ENST00000428165 BICRAQ9NZM4 1560 aa39.93■■■■□ 3.98
LINC00708-201ENST00000428165 PABPN1Q86U42 306 aaKnown RBP eCLIP39.92■■■■□ 3.98
LINC00708-201ENST00000428165 SCRIBQ14160 1630 aa39.83■■■■□ 3.97
LINC00708-201ENST00000428165 DNAJC5BQ9UF47 199 aa39.44■■■■□ 3.9
LINC00708-201ENST00000428165 SHROOM4Q9ULL8 1493 aa39.34■■■■□ 3.89
LINC00708-201ENST00000428165 EIF4G1Q04637 1599 aaKnown RBP38.86■■■■□ 3.81
LINC00708-201ENST00000428165 CC2D2AQ9P2K1 1620 aa38.78■■■■□ 3.8
LINC00708-201ENST00000428165 CECR2Q9BXF3 1484 aa38.46■■■■□ 3.75
LINC00708-201ENST00000428165 SMARCA4P51532 1647 aa38.04■■■■□ 3.68
LINC00708-201ENST00000428165 BAZ1AQ9NRL2 1556 aaPredicted RBP37.89■■■■□ 3.66
LINC00708-201ENST00000428165 ATAD2BQ9ULI0 1458 aa37.79■■■■□ 3.64
LINC00708-201ENST00000428165 NCAPD3P42695 1498 aa37.75■■■■□ 3.63
LINC00708-201ENST00000428165 SMARCA2P51531 1590 aa37.74■■■■□ 3.63
LINC00708-201ENST00000428165 MROH2BQ7Z745 1585 aa37.71■■■■□ 3.63
LINC00708-201ENST00000428165 HMGXB3Q12766 1538 aa37.62■■■■□ 3.61
LINC00708-201ENST00000428165 PEG3Q9GZU2 1588 aa37.61■■■■□ 3.61
LINC00708-201ENST00000428165 BAZ1BQ9UIG0 1483 aaKnown RBP37.48■■■■□ 3.59
LINC00708-201ENST00000428165 WIZO95785 1651 aa37.37■■■■□ 3.57
LINC00708-201ENST00000428165 RSF1Q96T23 1441 aaPredicted RBP37.13■■■■□ 3.53
LINC00708-201ENST00000428165 NESP48681 1621 aa37.03■■■■□ 3.52
LINC00708-201ENST00000428165 ERCC6Q03468 1493 aa36.88■■■■□ 3.5
LINC00708-201ENST00000428165 LAMC3Q9Y6N6 1575 aa36.87■■■■□ 3.49
LINC00708-201ENST00000428165 TOP2AP11388 1531 aaKnown RBP36.87■■■■□ 3.49
LINC00708-201ENST00000428165 KIF21AQ7Z4S6 1674 aa36.7■■■■□ 3.47
LINC00708-201ENST00000428165 CADPSQ9ULU8 1353 aa36.63■■■■□ 3.45
LINC00708-201ENST00000428165 THOC2Q8NI27 1593 aaKnown RBP36.57■■■■□ 3.44
LINC00708-201ENST00000428165 CUX2O14529 1486 aa36.55■■■■□ 3.44
LINC00708-201ENST00000428165 PDS5BQ9NTI5 1447 aa36.53■■■■□ 3.44
LINC00708-201ENST00000428165 CCDC88BA6NC98 1476 aa36.41■■■■□ 3.42
LINC00708-201ENST00000428165 CFTRP13569 1480 aa36.41■■■■□ 3.42
LINC00708-201ENST00000428165 PRDM2Q13029 1718 aa36.36■■■■□ 3.41
LINC00708-201ENST00000428165 FANCD2Q9BXW9 1451 aa36.28■■■■□ 3.4
LINC00708-201ENST00000428165 CEP164Q9UPV0 1460 aa36.26■■■■□ 3.4
LINC00708-201ENST00000428165 MRC2Q9UBG0 1479 aa36.24■■■■□ 3.39
LINC00708-201ENST00000428165 WDR62O43379 1518 aa36.17■■■■□ 3.38
LINC00708-201ENST00000428165 SUPT5HO00267 1087 aaKnown RBP36.02■■■■□ 3.36
LINC00708-201ENST00000428165 URB2Q14146 1524 aaKnown RBP35.98■■■■□ 3.35
LINC00708-201ENST00000428165 TOPBP1Q92547 1522 aa35.7■■■■□ 3.31
LINC00708-201ENST00000428165 DNMBPQ6XZF7 1577 aa35.66■■■■□ 3.3
LINC00708-201ENST00000428165 DNAJC5Q9H3Z4 198 aa35.59■■■■□ 3.29
LINC00708-201ENST00000428165 ABCC8Q09428 1581 aa35.59■■■■□ 3.29
LINC00708-201ENST00000428165 IFT140Q96RY7 1462 aa35.47■■■■□ 3.27
LINC00708-201ENST00000428165 ZNF608Q9ULD9 1512 aaPredicted RBP35.41■■■■□ 3.26
LINC00708-201ENST00000428165 CUX1P39880 1505 aa35.39■■■■□ 3.26
LINC00708-201ENST00000428165 TARBP1Q13395 1621 aaKnown RBP35.39■■■■□ 3.26
LINC00708-201ENST00000428165 POLA1P09884 1462 aaPredicted RBP35.38■■■■□ 3.25
LINC00708-201ENST00000428165 EIF4G3O43432 1585 aaKnown RBP35.32■■■■□ 3.24
LINC00708-201ENST00000428165 FGD5Q6ZNL6 1462 aa35.28■■■■□ 3.24
LINC00708-201ENST00000428165 RAD54L2Q9Y4B4 1467 aa35.24■■■■□ 3.23
LINC00708-201ENST00000428165 SOGA1O94964 1423 aa35.16■■■■□ 3.22
LINC00708-201ENST00000428165 AQRO60306 1485 aaKnown RBP eCLIP35.13■■■■□ 3.21
LINC00708-201ENST00000428165 WDR97A6NE52 1622 aa35.13■■■■□ 3.21
LINC00708-201ENST00000428165 BIVM-ERCC5R4GMW8 1640 aa35.08■■■■□ 3.21
LINC00708-201ENST00000428165 SYNJ1O43426 1573 aa35.06■■■■□ 3.2
LINC00708-201ENST00000428165 TOP2BQ02880 1626 aa35.03■■■■□ 3.2
LINC00708-201ENST00000428165 TDRD9Q8NDG6 1382 aaKnown RBP35.01■■■■□ 3.2
LINC00708-201ENST00000428165 WRNQ14191 1432 aaPredicted RBP eCLIP35.01■■■■□ 3.2
LINC00708-201ENST00000428165 CHD1O14646 1710 aa34.99■■■■□ 3.19
LINC00708-201ENST00000428165 PBRM1Q86U86 1689 aa34.92■■■■□ 3.18
LINC00708-201ENST00000428165 OSCARQ8IYS5 282 aa34.91■■■■□ 3.18
LINC00708-201ENST00000428165 ABCA10Q8WWZ4 1543 aa34.89■■■■□ 3.18
LINC00708-201ENST00000428165 ABCA5Q8WWZ7 1642 aa34.87■■■■□ 3.17
LINC00708-201ENST00000428165 SNAPC4Q5SXM2 1469 aa34.84■■■■□ 3.17
LINC00708-201ENST00000428165 GRIN2BQ13224 1484 aa34.79■■■■□ 3.16
LINC00708-201ENST00000428165 GAPVD1Q14C86 1478 aa34.79■■■■□ 3.16
LINC00708-201ENST00000428165 MAGI1Q96QZ7 1491 aaPredicted RBP34.73■■■■□ 3.15
LINC00708-201ENST00000428165 FBLN2P98095 1184 aa34.69■■■■□ 3.14
LINC00708-201ENST00000428165 SYNJ2O15056 1496 aa34.6■■■■□ 3.13
LINC00708-201ENST00000428165 RIMBP3CA6NJZ7 1639 aa34.59■■■■□ 3.13
LINC00708-201ENST00000428165 RIMBP3BA6NNM3 1639 aa34.59■■■■□ 3.13
LINC00708-201ENST00000428165 RIMBP3Q9UFD9 1639 aa34.59■■■■□ 3.13
LINC00708-201ENST00000428165 ADAMTS12P58397 1594 aa34.54■■■■□ 3.12
LINC00708-201ENST00000428165 CHMP7Q8WUX9 453 aaPredicted RBP34.53■■■■□ 3.12
LINC00708-201ENST00000428165 ARHGEF11O15085 1522 aa34.5■■■■□ 3.11
LINC00708-201ENST00000428165 CLASP1Q7Z460 1538 aa34.49■■■■□ 3.11
LINC00708-201ENST00000428165 ERICH3Q5RHP9 1530 aa34.47■■■■□ 3.11
LINC00708-201ENST00000428165 TRIM41Q8WV44 630 aa34.41■■■■□ 3.1
LINC00708-201ENST00000428165 GRIN2AQ12879 1464 aa34.39■■■■□ 3.1
LINC00708-201ENST00000428165 FHAD1B1AJZ9 1412 aa34.35■■■■□ 3.09
LINC00708-201ENST00000428165 CEP170Q5SW79 1584 aa34.3■■■■□ 3.08
LINC00708-201ENST00000428165 KIF27Q86VH2 1401 aa34.26■■■■□ 3.07
LINC00708-201ENST00000428165 NUP160Q12769 1436 aa34.21■■■■□ 3.07
LINC00708-201ENST00000428165 ARAP1Q96P48 1450 aa34.21■■■■□ 3.07
LINC00708-201ENST00000428165 CUL7Q14999 1698 aa34.19■■■■□ 3.06
LINC00708-201ENST00000428165 IGF1RP08069 1367 aa34.14■■■■□ 3.06
LINC00708-201ENST00000428165 CYB5RLQ6IPT4 315 aa34.09■■■■□ 3.05
LINC00708-201ENST00000428165 SHROOM2Q13796 1616 aa34.08■■■■□ 3.05
LINC00708-201ENST00000428165 ERCC6L2Q5T890 1561 aa34.05■■■■□ 3.04
LINC00708-201ENST00000428165 RUSC2Q8N2Y8 1516 aa34.04■■■■□ 3.04
LINC00708-201ENST00000428165 CARMIL1Q5VZK9 1371 aa33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 242.6 ms