RNA–Protein interactions for RNA: ENST00000450587.1

UBE2SP1-201, Transcript of ubiquitin conjugating enzyme E2 S pseudogene 1, humanhuman

BASIC

Gene UBE2SP1, Length 669 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2SP1-201ENST00000450587 NISCHQ9Y2I1 1504 aa49.29■■■■■ 5.48
UBE2SP1-201ENST00000450587 CCDC180Q9P1Z9 1646 aa44.21■■■■■ 4.67
UBE2SP1-201ENST00000450587 ABCC9O60706 1549 aa44.07■■■■■ 4.65
UBE2SP1-201ENST00000450587 RB1CC1Q8TDY2 1594 aa42.06■■■■■ 4.32
UBE2SP1-201ENST00000450587 NACADO15069 1562 aa41.81■■■■■ 4.28
UBE2SP1-201ENST00000450587 DCAF8L2P0C7V8 631 aa41.59■■■■■ 4.25
UBE2SP1-201ENST00000450587 MYO15BQ96JP2 1530 aa41.3■■■■■ 4.2
UBE2SP1-201ENST00000450587 DNAJC5BQ9UF47 199 aa41.26■■■■■ 4.2
UBE2SP1-201ENST00000450587 PABPN1Q86U42 306 aaKnown RBP eCLIP41.05■■■■■ 4.16
UBE2SP1-201ENST00000450587 UNC13AQ9UPW8 1703 aa41■■■■■ 4.15
UBE2SP1-201ENST00000450587 ZCCHC6Q5VYS8 1495 aaKnown RBP40.84■■■■■ 4.13
UBE2SP1-201ENST00000450587 DCAF1Q9Y4B6 1507 aa40.78■■■■■ 4.12
UBE2SP1-201ENST00000450587 BICRAQ9NZM4 1560 aa40.75■■■■■ 4.11
UBE2SP1-201ENST00000450587 SHROOM4Q9ULL8 1493 aa40.35■■■■■ 4.05
UBE2SP1-201ENST00000450587 SCRIBQ14160 1630 aa40.2■■■■■ 4.03
UBE2SP1-201ENST00000450587 CC2D2AQ9P2K1 1620 aa39.83■■■■□ 3.97
UBE2SP1-201ENST00000450587 EIF4G1Q04637 1599 aaKnown RBP39.78■■■■□ 3.96
UBE2SP1-201ENST00000450587 CECR2Q9BXF3 1484 aa39.73■■■■□ 3.95
UBE2SP1-201ENST00000450587 NCAPD3P42695 1498 aa38.6■■■■□ 3.77
UBE2SP1-201ENST00000450587 ATAD2BQ9ULI0 1458 aa38.45■■■■□ 3.75
UBE2SP1-201ENST00000450587 SMARCA4P51532 1647 aa38.4■■■■□ 3.74
UBE2SP1-201ENST00000450587 SMARCA2P51531 1590 aa38.39■■■■□ 3.74
UBE2SP1-201ENST00000450587 HMGXB3Q12766 1538 aa38.29■■■■□ 3.72
UBE2SP1-201ENST00000450587 BAZ1AQ9NRL2 1556 aaPredicted RBP38.28■■■■□ 3.72
UBE2SP1-201ENST00000450587 ERCC6Q03468 1493 aa38.09■■■■□ 3.69
UBE2SP1-201ENST00000450587 BAZ1BQ9UIG0 1483 aaKnown RBP38.09■■■■□ 3.69
UBE2SP1-201ENST00000450587 PEG3Q9GZU2 1588 aa38.08■■■■□ 3.69
UBE2SP1-201ENST00000450587 CUX2O14529 1486 aa38.03■■■■□ 3.68
UBE2SP1-201ENST00000450587 DNAJC5Q9H3Z4 198 aa37.94■■■■□ 3.66
UBE2SP1-201ENST00000450587 MROH2BQ7Z745 1585 aa37.93■■■■□ 3.66
UBE2SP1-201ENST00000450587 NESP48681 1621 aa37.85■■■■□ 3.65
UBE2SP1-201ENST00000450587 LAMC3Q9Y6N6 1575 aa37.71■■■■□ 3.63
UBE2SP1-201ENST00000450587 PDS5BQ9NTI5 1447 aa37.53■■■■□ 3.6
UBE2SP1-201ENST00000450587 WIZO95785 1651 aa37.47■■■■□ 3.59
UBE2SP1-201ENST00000450587 THOC2Q8NI27 1593 aaKnown RBP37.46■■■■□ 3.59
UBE2SP1-201ENST00000450587 CADPSQ9ULU8 1353 aa37.43■■■■□ 3.58
UBE2SP1-201ENST00000450587 KIF21AQ7Z4S6 1674 aa37.37■■■■□ 3.57
UBE2SP1-201ENST00000450587 RSF1Q96T23 1441 aaPredicted RBP37.21■■■■□ 3.55
UBE2SP1-201ENST00000450587 MRC2Q9UBG0 1479 aa37.13■■■■□ 3.53
UBE2SP1-201ENST00000450587 TOP2AP11388 1531 aaKnown RBP37.05■■■■□ 3.52
UBE2SP1-201ENST00000450587 WDR62O43379 1518 aa37.02■■■■□ 3.52
UBE2SP1-201ENST00000450587 CFTRP13569 1480 aa37.01■■■■□ 3.51
UBE2SP1-201ENST00000450587 CEP164Q9UPV0 1460 aa37.01■■■■□ 3.51
UBE2SP1-201ENST00000450587 FANCD2Q9BXW9 1451 aa36.96■■■■□ 3.51
UBE2SP1-201ENST00000450587 CCDC88BA6NC98 1476 aa36.62■■■■□ 3.45
UBE2SP1-201ENST00000450587 URB2Q14146 1524 aaKnown RBP36.61■■■■□ 3.45
UBE2SP1-201ENST00000450587 PRDM2Q13029 1718 aa36.6■■■■□ 3.45
UBE2SP1-201ENST00000450587 OSCARQ8IYS5 282 aa36.37■■■■□ 3.41
UBE2SP1-201ENST00000450587 ABCC8Q09428 1581 aa36.32■■■■□ 3.4
UBE2SP1-201ENST00000450587 IFT140Q96RY7 1462 aa36.29■■■■□ 3.4
UBE2SP1-201ENST00000450587 TOPBP1Q92547 1522 aa36.26■■■■□ 3.4
UBE2SP1-201ENST00000450587 TRIM41Q8WV44 630 aa36.24■■■■□ 3.39
UBE2SP1-201ENST00000450587 DNMBPQ6XZF7 1577 aa36.15■■■■□ 3.38
UBE2SP1-201ENST00000450587 ZNF608Q9ULD9 1512 aaPredicted RBP36.13■■■■□ 3.38
UBE2SP1-201ENST00000450587 EIF4G3O43432 1585 aaKnown RBP35.94■■■■□ 3.34
UBE2SP1-201ENST00000450587 TARBP1Q13395 1621 aaKnown RBP35.92■■■■□ 3.34
UBE2SP1-201ENST00000450587 POLA1P09884 1462 aaPredicted RBP35.89■■■■□ 3.34
UBE2SP1-201ENST00000450587 AQRO60306 1485 aaKnown RBP eCLIP35.85■■■■□ 3.33
UBE2SP1-201ENST00000450587 SOGA1O94964 1423 aa35.78■■■■□ 3.32
UBE2SP1-201ENST00000450587 RIMBP3CA6NJZ7 1639 aa35.75■■■■□ 3.31
UBE2SP1-201ENST00000450587 RIMBP3BA6NNM3 1639 aa35.75■■■■□ 3.31
UBE2SP1-201ENST00000450587 RIMBP3Q9UFD9 1639 aa35.75■■■■□ 3.31
UBE2SP1-201ENST00000450587 RAD54L2Q9Y4B4 1467 aa35.73■■■■□ 3.31
UBE2SP1-201ENST00000450587 ARHGEF11O15085 1522 aa35.67■■■■□ 3.3
UBE2SP1-201ENST00000450587 FGD5Q6ZNL6 1462 aa35.67■■■■□ 3.3
UBE2SP1-201ENST00000450587 TDRD9Q8NDG6 1382 aaKnown RBP35.65■■■■□ 3.3
UBE2SP1-201ENST00000450587 WDR97A6NE52 1622 aa35.65■■■■□ 3.3
UBE2SP1-201ENST00000450587 FBLN2P98095 1184 aa35.65■■■■□ 3.3
UBE2SP1-201ENST00000450587 CHD1O14646 1710 aa35.65■■■■□ 3.3
UBE2SP1-201ENST00000450587 CUX1P39880 1505 aa35.63■■■■□ 3.29
UBE2SP1-201ENST00000450587 SUPT5HO00267 1087 aaKnown RBP35.63■■■■□ 3.29
UBE2SP1-201ENST00000450587 SNAPC4Q5SXM2 1469 aa35.48■■■■□ 3.27
UBE2SP1-201ENST00000450587 GRIN2BQ13224 1484 aa35.46■■■■□ 3.27
UBE2SP1-201ENST00000450587 MAGI1Q96QZ7 1491 aaPredicted RBP35.46■■■■□ 3.27
UBE2SP1-201ENST00000450587 CYB5RLQ6IPT4 315 aa35.45■■■■□ 3.27
UBE2SP1-201ENST00000450587 CHMP7Q8WUX9 453 aaPredicted RBP35.45■■■■□ 3.27
UBE2SP1-201ENST00000450587 GAPVD1Q14C86 1478 aa35.33■■■■□ 3.25
UBE2SP1-201ENST00000450587 SYNJ2O15056 1496 aa35.32■■■■□ 3.24
UBE2SP1-201ENST00000450587 SYNJ1O43426 1573 aa35.32■■■■□ 3.24
UBE2SP1-201ENST00000450587 ABCA10Q8WWZ4 1543 aa35.32■■■■□ 3.24
UBE2SP1-201ENST00000450587 ARAP1Q96P48 1450 aa35.3■■■■□ 3.24
UBE2SP1-201ENST00000450587 CLASP1Q7Z460 1538 aa35.28■■■■□ 3.24
UBE2SP1-201ENST00000450587 PBRM1Q86U86 1689 aa35.25■■■■□ 3.23
UBE2SP1-201ENST00000450587 WRNQ14191 1432 aaPredicted RBP eCLIP35.22■■■■□ 3.23
UBE2SP1-201ENST00000450587 ABCA5Q8WWZ7 1642 aa35.2■■■■□ 3.23
UBE2SP1-201ENST00000450587 TOP2BQ02880 1626 aa35.13■■■■□ 3.21
UBE2SP1-201ENST00000450587 BIVM-ERCC5R4GMW8 1640 aa35.11■■■■□ 3.21
UBE2SP1-201ENST00000450587 TRHP20396 242 aaPredicted RBP35.05■■■■□ 3.2
UBE2SP1-201ENST00000450587 GRIN2AQ12879 1464 aa34.97■■■■□ 3.19
UBE2SP1-201ENST00000450587 ADAMTS12P58397 1594 aa34.92■■■■□ 3.18
UBE2SP1-201ENST00000450587 FHAD1B1AJZ9 1412 aa34.91■■■■□ 3.18
UBE2SP1-201ENST00000450587 ERICH3Q5RHP9 1530 aa34.89■■■■□ 3.18
UBE2SP1-201ENST00000450587 NUP160Q12769 1436 aa34.86■■■■□ 3.17
UBE2SP1-201ENST00000450587 CEP170Q5SW79 1584 aa34.79■■■■□ 3.16
UBE2SP1-201ENST00000450587 SHROOM2Q13796 1616 aa34.68■■■■□ 3.14
UBE2SP1-201ENST00000450587 ERCC6L2Q5T890 1561 aa34.66■■■■□ 3.14
UBE2SP1-201ENST00000450587 JPH4Q96JJ6 628 aa34.57■■■■□ 3.12
UBE2SP1-201ENST00000450587 PRG4Q92954 1404 aaPredicted RBP34.53■■■■□ 3.12
UBE2SP1-201ENST00000450587 KIF27Q86VH2 1401 aa34.5■■■■□ 3.11
UBE2SP1-201ENST00000450587 IGF1RP08069 1367 aa34.46■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms