RNA–Protein interactions for RNA: ENST00000430149.2

CDKN1C-203, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-203ENST00000430149 NISCHQ9Y2I1 1504 aa47.77■■■■■ 5.24
CDKN1C-203ENST00000430149 CCDC180Q9P1Z9 1646 aa42.12■■■■■ 4.33
CDKN1C-203ENST00000430149 ABCC9O60706 1549 aa40.95■■■■■ 4.15
CDKN1C-203ENST00000430149 ZCCHC6Q5VYS8 1495 aaKnown RBP39.89■■■■□ 3.98
CDKN1C-203ENST00000430149 DCAF8L2P0C7V8 631 aa39.86■■■■□ 3.97
CDKN1C-203ENST00000430149 NACADO15069 1562 aa39.52■■■■□ 3.92
CDKN1C-203ENST00000430149 RB1CC1Q8TDY2 1594 aa39.44■■■■□ 3.9
CDKN1C-203ENST00000430149 DCAF1Q9Y4B6 1507 aa39.44■■■■□ 3.9
CDKN1C-203ENST00000430149 MYO15BQ96JP2 1530 aa39.38■■■■□ 3.9
CDKN1C-203ENST00000430149 SCRIBQ14160 1630 aa38.65■■■■□ 3.78
CDKN1C-203ENST00000430149 UNC13AQ9UPW8 1703 aa38.63■■■■□ 3.77
CDKN1C-203ENST00000430149 PABPN1Q86U42 306 aaKnown RBP eCLIP38.43■■■■□ 3.74
CDKN1C-203ENST00000430149 BICRAQ9NZM4 1560 aa38.34■■■■□ 3.73
CDKN1C-203ENST00000430149 SHROOM4Q9ULL8 1493 aa38.23■■■■□ 3.71
CDKN1C-203ENST00000430149 CECR2Q9BXF3 1484 aa37.27■■■■□ 3.56
CDKN1C-203ENST00000430149 EIF4G1Q04637 1599 aaKnown RBP37.26■■■■□ 3.55
CDKN1C-203ENST00000430149 DNAJC5BQ9UF47 199 aa37.23■■■■□ 3.55
CDKN1C-203ENST00000430149 CC2D2AQ9P2K1 1620 aa36.99■■■■□ 3.51
CDKN1C-203ENST00000430149 SMARCA4P51532 1647 aa36.95■■■■□ 3.51
CDKN1C-203ENST00000430149 BAZ1AQ9NRL2 1556 aaPredicted RBP36.93■■■■□ 3.5
CDKN1C-203ENST00000430149 MROH2BQ7Z745 1585 aa36.9■■■■□ 3.5
CDKN1C-203ENST00000430149 ATAD2BQ9ULI0 1458 aa36.65■■■■□ 3.46
CDKN1C-203ENST00000430149 RSF1Q96T23 1441 aaPredicted RBP36.64■■■■□ 3.46
CDKN1C-203ENST00000430149 SMARCA2P51531 1590 aa36.54■■■■□ 3.44
CDKN1C-203ENST00000430149 WIZO95785 1651 aa36.52■■■■□ 3.44
CDKN1C-203ENST00000430149 PEG3Q9GZU2 1588 aa36.51■■■■□ 3.44
CDKN1C-203ENST00000430149 NCAPD3P42695 1498 aa36.51■■■■□ 3.43
CDKN1C-203ENST00000430149 BAZ1BQ9UIG0 1483 aaKnown RBP36.35■■■■□ 3.41
CDKN1C-203ENST00000430149 HMGXB3Q12766 1538 aa36.33■■■■□ 3.41
CDKN1C-203ENST00000430149 SUPT5HO00267 1087 aaKnown RBP36.19■■■■□ 3.38
CDKN1C-203ENST00000430149 TOP2AP11388 1531 aaKnown RBP36.07■■■■□ 3.37
CDKN1C-203ENST00000430149 CCDC88BA6NC98 1476 aa35.72■■■■□ 3.31
CDKN1C-203ENST00000430149 NESP48681 1621 aa35.62■■■■□ 3.29
CDKN1C-203ENST00000430149 CADPSQ9ULU8 1353 aa35.5■■■■□ 3.27
CDKN1C-203ENST00000430149 LAMC3Q9Y6N6 1575 aa35.41■■■■□ 3.26
CDKN1C-203ENST00000430149 CFTRP13569 1480 aa35.39■■■■□ 3.26
CDKN1C-203ENST00000430149 PDS5BQ9NTI5 1447 aa35.19■■■■□ 3.22
CDKN1C-203ENST00000430149 ERCC6Q03468 1493 aa35.18■■■■□ 3.22
CDKN1C-203ENST00000430149 KIF21AQ7Z4S6 1674 aa35.12■■■■□ 3.21
CDKN1C-203ENST00000430149 FANCD2Q9BXW9 1451 aa35.11■■■■□ 3.21
CDKN1C-203ENST00000430149 PRDM2Q13029 1718 aa35.05■■■■□ 3.2
CDKN1C-203ENST00000430149 CEP164Q9UPV0 1460 aa34.97■■■■□ 3.19
CDKN1C-203ENST00000430149 THOC2Q8NI27 1593 aaKnown RBP34.85■■■■□ 3.17
CDKN1C-203ENST00000430149 MRC2Q9UBG0 1479 aa34.83■■■■□ 3.17
CDKN1C-203ENST00000430149 URB2Q14146 1524 aaKnown RBP34.76■■■■□ 3.16
CDKN1C-203ENST00000430149 WDR62O43379 1518 aa34.69■■■■□ 3.14
CDKN1C-203ENST00000430149 ABCC8Q09428 1581 aa34.61■■■■□ 3.13
CDKN1C-203ENST00000430149 TOPBP1Q92547 1522 aa34.61■■■■□ 3.13
CDKN1C-203ENST00000430149 CUX1P39880 1505 aa34.56■■■■□ 3.12
CDKN1C-203ENST00000430149 DNMBPQ6XZF7 1577 aa34.56■■■■□ 3.12
CDKN1C-203ENST00000430149 CUX2O14529 1486 aa34.55■■■■□ 3.12
CDKN1C-203ENST00000430149 WRNQ14191 1432 aaPredicted RBP eCLIP34.49■■■■□ 3.11
CDKN1C-203ENST00000430149 SYNJ1O43426 1573 aa34.42■■■■□ 3.1
CDKN1C-203ENST00000430149 POLA1P09884 1462 aaPredicted RBP34.36■■■■□ 3.09
CDKN1C-203ENST00000430149 FGD5Q6ZNL6 1462 aa34.35■■■■□ 3.09
CDKN1C-203ENST00000430149 TOP2BQ02880 1626 aa34.33■■■■□ 3.09
CDKN1C-203ENST00000430149 BIVM-ERCC5R4GMW8 1640 aa34.31■■■■□ 3.08
CDKN1C-203ENST00000430149 RAD54L2Q9Y4B4 1467 aa34.27■■■■□ 3.08
CDKN1C-203ENST00000430149 SOGA1O94964 1423 aa34.22■■■■□ 3.07
CDKN1C-203ENST00000430149 IFT140Q96RY7 1462 aa34.21■■■■□ 3.07
CDKN1C-203ENST00000430149 TARBP1Q13395 1621 aaKnown RBP34.18■■■■□ 3.06
CDKN1C-203ENST00000430149 ZNF608Q9ULD9 1512 aaPredicted RBP34.14■■■■□ 3.06
CDKN1C-203ENST00000430149 TRIM41Q8WV44 630 aa34.06■■■■□ 3.04
CDKN1C-203ENST00000430149 CHIC1Q5VXU3 224 aa34.04■■■■□ 3.04
CDKN1C-203ENST00000430149 TDRD9Q8NDG6 1382 aaKnown RBP34.03■■■■□ 3.04
CDKN1C-203ENST00000430149 AQRO60306 1485 aaKnown RBP eCLIP34.01■■■■□ 3.031e-6■■■□□ 16.1
CDKN1C-203ENST00000430149 ABCA10Q8WWZ4 1543 aa33.99■■■■□ 3.03
CDKN1C-203ENST00000430149 WDR97A6NE52 1622 aa33.98■■■■□ 3.03
CDKN1C-203ENST00000430149 EIF4G3O43432 1585 aaKnown RBP33.94■■■■□ 3.02
CDKN1C-203ENST00000430149 GAPVD1Q14C86 1478 aa33.82■■■■□ 3
CDKN1C-203ENST00000430149 ABCA5Q8WWZ7 1642 aa33.81■■■■□ 3
CDKN1C-203ENST00000430149 GRIN2BQ13224 1484 aa33.72■■■□□ 2.99
CDKN1C-203ENST00000430149 RUSC2Q8N2Y8 1516 aa33.71■■■□□ 2.99
CDKN1C-203ENST00000430149 KIF27Q86VH2 1401 aa33.7■■■□□ 2.99
CDKN1C-203ENST00000430149 PBRM1Q86U86 1689 aa33.68■■■□□ 2.98
CDKN1C-203ENST00000430149 SNAPC4Q5SXM2 1469 aa33.66■■■□□ 2.98
CDKN1C-203ENST00000430149 IGF1RP08069 1367 aa33.58■■■□□ 2.97
CDKN1C-203ENST00000430149 ERICH3Q5RHP9 1530 aa33.56■■■□□ 2.96
CDKN1C-203ENST00000430149 MAGI1Q96QZ7 1491 aaPredicted RBP33.54■■■□□ 2.96
CDKN1C-203ENST00000430149 FBLN2P98095 1184 aa33.51■■■□□ 2.95
CDKN1C-203ENST00000430149 FAM9AQ8IZU1 332 aaPredicted RBP33.49■■■□□ 2.95
CDKN1C-203ENST00000430149 ADAMTS12P58397 1594 aa33.46■■■□□ 2.95
CDKN1C-203ENST00000430149 SYNJ2O15056 1496 aa33.43■■■□□ 2.94
CDKN1C-203ENST00000430149 CHMP7Q8WUX9 453 aaPredicted RBP33.43■■■□□ 2.94
CDKN1C-203ENST00000430149 FHAD1B1AJZ9 1412 aa33.42■■■□□ 2.94
CDKN1C-203ENST00000430149 CHD1O14646 1710 aa33.42■■■□□ 2.94
CDKN1C-203ENST00000430149 CARMIL1Q5VZK9 1371 aa33.37■■■□□ 2.93
CDKN1C-203ENST00000430149 CSRNP3Q8WYN3 585 aa33.34■■■□□ 2.93
CDKN1C-203ENST00000430149 CUL7Q14999 1698 aa33.32■■■□□ 2.93
CDKN1C-203ENST00000430149 EEA1Q15075 1411 aa33.32■■■□□ 2.92
CDKN1C-203ENST00000430149 GRIN2AQ12879 1464 aa33.3■■■□□ 2.92
CDKN1C-203ENST00000430149 OSCARQ8IYS5 282 aa33.29■■■□□ 2.92
CDKN1C-203ENST00000430149 PRXQ9BXM0 1461 aa33.21■■■□□ 2.91
CDKN1C-203ENST00000430149 DNAJC5Q9H3Z4 198 aa33.19■■■□□ 2.9
CDKN1C-203ENST00000430149 RAPGEF2Q9Y4G8 1499 aa33.18■■■□□ 2.9
CDKN1C-203ENST00000430149 CEP170Q5SW79 1584 aa33.15■■■□□ 2.9
CDKN1C-203ENST00000430149 NUP160Q12769 1436 aa33.13■■■□□ 2.89
CDKN1C-203ENST00000430149 EHMT2Q96KQ7 1210 aa33.09■■■□□ 2.89
CDKN1C-203ENST00000430149 CLASP1Q7Z460 1538 aa33.06■■■□□ 2.88
CDKN1C-203ENST00000430149 KIF21BO75037 1637 aa32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms