Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 EMP24YGL200C 612 nt2.49□□□□□ -2.01
TY4A-JP47023 HCS1YKL017C 2052 nt2.49□□□□□ -2.01
TY4A-JP47023 PXA2YKL188C 2562 nt2.49□□□□□ -2.01
TY4A-JP47023 snR55snR55 98 nt2.48□□□□□ -2.01
TY4A-JP47023 YCR018C-AYCR018C-A 255 nt2.48□□□□□ -2.01
TY4A-JP47023 ABF2YMR072W 552 nt2.48□□□□□ -2.01
TY4A-JP47023 CYB5YNL111C 363 nt2.48□□□□□ -2.01
TY4A-JP47023 INP2YMR163C 2118 nt2.48□□□□□ -2.01
TY4A-JP47023 SSQ1YLR369W 1974 nt2.47□□□□□ -2.01
TY4A-JP47023 snR80snR80 171 nt2.47□□□□□ -2.01
TY4A-JP47023 MNE1YOR350C 1992 nt2.47□□□□□ -2.01
TY4A-JP47023 SCW11YGL028C 1629 nt2.46□□□□□ -2.02
TY4A-JP47023 ARP8YOR141C 2646 nt2.46□□□□□ -2.02
TY4A-JP47023 CDC60YPL160W 3273 nt2.46□□□□□ -2.02
TY4A-JP47023 YCR043CYCR043C 384 nt2.46□□□□□ -2.02
TY4A-JP47023 YEL020C-BYEL020C-B 198 nt2.46□□□□□ -2.02
TY4A-JP47023 YLR255CYLR255C 354 nt2.46□□□□□ -2.02
TY4A-JP47023 YNL028WYNL028W 318 nt2.46□□□□□ -2.02
TY4A-JP47023 YOR394C-AYOR394C-A 168 nt2.46□□□□□ -2.02
TY4A-JP47023 YBL005W-BYBL005W-B 5268 nt2.46□□□□□ -2.02
TY4A-JP47023 PET309YLR067C 2898 nt2.45□□□□□ -2.02
TY4A-JP47023 YHR073W-AYHR073W-A 177 nt2.45□□□□□ -2.02
TY4A-JP47023 YMR307C-AYMR307C-A 195 nt2.45□□□□□ -2.02
TY4A-JP47023 YBR064WYBR064W 429 nt2.45□□□□□ -2.02
TY4A-JP47023 PDR8YLR266C 2106 nt2.45□□□□□ -2.02
TY4A-JP47023 RFX1YLR176C 2436 nt2.44□□□□□ -2.02
TY4A-JP47023 YPL216WYPL216W 3309 nt2.44□□□□□ -2.02
TY4A-JP47023 IRC8YJL051W 2469 nt2.44□□□□□ -2.02
TY4A-JP47023 MVP1YMR004W 1536 nt2.44□□□□□ -2.02
TY4A-JP47023 YKR075W-AYKR075W-A 270 nt2.44□□□□□ -2.02
TY4A-JP47023 CAT2YML042W 2013 nt2.44□□□□□ -2.02
TY4A-JP47023 LCD1YDR499W 2244 nt2.44□□□□□ -2.02
TY4A-JP47023 SAC3YDR159W 3906 nt2.43□□□□□ -2.02
TY4A-JP47023 PTP3YER075C 2787 nt2.43□□□□□ -2.02
TY4A-JP47023 MCD1YDL003W 1701 nt2.42□□□□□ -2.02
TY4A-JP47023 SEC26YDR238C 2922 nt2.42□□□□□ -2.02
TY4A-JP47023 HER1YOR227W 3741 nt2.42□□□□□ -2.02
TY4A-JP47023 SVL3YPL032C 2478 nt2.42□□□□□ -2.02
TY4A-JP47023 DNA2YHR164C 4569 nt2.41□□□□□ -2.02
TY4A-JP47023 YGL041CYGL041C 204 nt2.41□□□□□ -2.02
TY4A-JP47023 YMR230W-AYMR230W-A 189 nt2.41□□□□□ -2.02
TY4A-JP47023 CSE2YNR010W 450 nt2.41□□□□□ -2.02
TY4A-JP47023 PLC1YPL268W 2610 nt2.41□□□□□ -2.02
TY4A-JP47023 MGA2YIR033W 3342 nt2.41□□□□□ -2.02
TY4A-JP47023 IRR1YIL026C 3453 nt2.41□□□□□ -2.02
TY4A-JP47023 SPT21YMR179W 2277 nt2.4□□□□□ -2.02
TY4A-JP47023 YMR141W-AYMR141W-A 225 nt2.4□□□□□ -2.03
TY4A-JP47023 ZIP1YDR285W 2628 nt2.4□□□□□ -2.03
TY4A-JP47023 VIK1YPL253C 1944 nt2.39□□□□□ -2.03
TY4A-JP47023 BRP1YGL007W 378 nt2.39□□□□□ -2.03
TY4A-JP47023 YJL135WYJL135W 318 nt2.39□□□□□ -2.03
TY4A-JP47023 LYS14YDR034C 2373 nt2.39□□□□□ -2.03
TY4A-JP47023 PDR3YBL005W 2931 nt2.39□□□□□ -2.03
TY4A-JP47023 NAM7YMR080C 2916 nt2.38□□□□□ -2.03
TY4A-JP47023 STH1YIL126W 4080 nt2.38□□□□□ -2.03
TY4A-JP47023 USO1YDL058W 5373 nt2.38□□□□□ -2.03
TY4A-JP47023 VPS13YLL040C 9435 nt2.38□□□□□ -2.03
TY4A-JP47023 YHR071C-AYHR071C-A 321 nt2.38□□□□□ -2.03
TY4A-JP47023 TMA7YLR262C-A 195 nt2.38□□□□□ -2.03
TY4A-JP47023 MAK10YEL053C 2202 nt2.38□□□□□ -2.03
TY4A-JP47023 RPL37BYDR500C 267 nt2.37□□□□□ -2.03
TY4A-JP47023 YJL197C-AYJL197C-A 282 nt2.37□□□□□ -2.03
TY4A-JP47023 YOR055WYOR055W 435 nt2.37□□□□□ -2.03
TY4A-JP47023 YDR341CYDR341C 1824 nt2.37□□□□□ -2.03
TY4A-JP47023 SSD1YDR293C 3753 nt2.37□□□□□ -2.03
TY4A-JP47023 SAS3YBL052C 2496 nt2.36□□□□□ -2.03
TY4A-JP47023 ELG1YOR144C 2376 nt2.36□□□□□ -2.03
TY4A-JP47023 SYH1YPL105C 2550 nt2.36□□□□□ -2.03
TY4A-JP47023 YIL156W-BYIL156W-B 222 nt2.36□□□□□ -2.03
TY4A-JP47023 PAU18YLL064C 363 nt2.36□□□□□ -2.03
TY4A-JP47023 PAU6YNR076W 363 nt2.36□□□□□ -2.03
TY4A-JP47023 SSS1YDR086C 243 nt2.35□□□□□ -2.03
TY4A-JP47023 YGL052WYGL052W 306 nt2.35□□□□□ -2.03
TY4A-JP47023 PDR1YGL013C 3207 nt2.35□□□□□ -2.03
TY4A-JP47023 ZRG17YNR039C 1818 nt2.35□□□□□ -2.03
TY4A-JP47023 UBP1YDL122W 2430 nt2.34□□□□□ -2.03
TY4A-JP47023 IRE1YHR079C 3348 nt2.34□□□□□ -2.03
TY4A-JP47023 PDR11YIL013C 4236 nt2.34□□□□□ -2.03
TY4A-JP47023 snR72snR72 98 nt2.34□□□□□ -2.03
TY4A-JP47023 YCL046WYCL046W 324 nt2.34□□□□□ -2.03
TY4A-JP47023 HMI1YOL095C 2121 nt2.33□□□□□ -2.04
TY4A-JP47023 PDE2YOR360C 1581 nt2.33□□□□□ -2.04
TY4A-JP47023 PAU2YEL049W 363 nt2.33□□□□□ -2.04
TY4A-JP47023 PUT3YKL015W 2940 nt2.32□□□□□ -2.04
TY4A-JP47023 YLL032CYLL032C 2478 nt2.32□□□□□ -2.04
TY4A-JP47023 GPG1YGL121C 381 nt2.32□□□□□ -2.04
TY4A-JP47023 YMR172C-AYMR172C-A 384 nt2.32□□□□□ -2.04
TY4A-JP47023 IES4YOR189W 351 nt2.32□□□□□ -2.04
TY4A-JP47023 Q0032Q0032 291 nt2.31□□□□□ -2.04
TY4A-JP47023 YCR087C-AYCR087C-A 462 nt2.31□□□□□ -2.04
TY4A-JP47023 YOR218CYOR218C 420 nt2.31□□□□□ -2.04
TY4A-JP47023 NOP14YDL148C 2433 nt2.31□□□□□ -2.04
TY4A-JP47023 MSC6YOR354C 2079 nt2.3□□□□□ -2.04
TY4A-JP47023 SEC31YDL195W 3822 nt2.3□□□□□ -2.04
TY4A-JP47023 SRP14YDL092W 441 nt2.3□□□□□ -2.04
TY4A-JP47023 PFD1YJL179W 330 nt2.3□□□□□ -2.04
TY4A-JP47023 YLR120W-AYLR120W-A 102 nt2.3□□□□□ -2.04
TY4A-JP47023 YOR108C-AYOR108C-A 210 nt2.3□□□□□ -2.04
TY4A-JP47023 STE11YLR362W 2154 nt2.3□□□□□ -2.04
TY4A-JP47023 YOL098CYOL098C 3114 nt2.3□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 428 ms