RNA–Protein interactions for RNA: YLR266C

PDR8, Transcript of Transcription factor, yeastyeast

Gene PDR8, Length 2,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDR8YLR266C FAP1P53971 965 aa7.45□□□□□ -1.22
PDR8YLR266C PRY3P47033 881 aa7.01□□□□□ -1.29
PDR8YLR266C MTC1P47018 478 aaKnown RBP6.85□□□□□ -1.31
PDR8YLR266C HAA1Q12753 694 aaKnown RBP6.59□□□□□ -1.35
PDR8YLR266C AAD16Q02895 342 aa6.52□□□□□ -1.37
PDR8YLR266C PRI1P10363 409 aa6.34□□□□□ -1.39
PDR8YLR266C YCK3P39962 524 aa6.32□□□□□ -1.4
PDR8YLR266C ISW2Q08773 1120 aa6.02□□□□□ -1.45
PDR8YLR266C TSR3Q12094 313 aaKnown RBP5.93□□□□□ -1.46
PDR8YLR266C YGL015CP33199 130 aa5.9□□□□□ -1.47
PDR8YLR266C RPG1P38249 964 aaKnown RBP5.89□□□□□ -1.47
PDR8YLR266C MRPL32P25348 183 aa5.84□□□□□ -1.47
PDR8YLR266C BUD31P25337 157 aaPredicted RBP5.81□□□□□ -1.48
PDR8YLR266C SIS1P25294 352 aaKnown RBP5.53□□□□□ -1.52
PDR8YLR266C UBP9P39967 754 aa5.39□□□□□ -1.55
PDR8YLR266C DRS1P32892 752 aaKnown RBP5.35□□□□□ -1.55
PDR8YLR266C UBP10P53874 792 aaPredicted RBP5.33□□□□□ -1.56
PDR8YLR266C REB1P21538 810 aa5.27□□□□□ -1.57
PDR8YLR266C RSE1Q04693 1361 aaKnown RBP5.26□□□□□ -1.57
PDR8YLR266C TIF4632P39936 914 aaKnown RBP5.2□□□□□ -1.58
PDR8YLR266C MAP2P38174 421 aaKnown RBP5.18□□□□□ -1.58
PDR8YLR266C CDC27P38042 758 aa5.17□□□□□ -1.58
PDR8YLR266C RPL17AP05740 184 aaKnown RBP5.13□□□□□ -1.59
PDR8YLR266C RPL17BP46990 184 aaKnown RBP5.13□□□□□ -1.59
PDR8YLR266C TGL3P40308 642 aa5.11□□□□□ -1.59
PDR8YLR266C DIP2Q12220 943 aaPredicted RBP5.06□□□□□ -1.6
PDR8YLR266C SLX5P32828 619 aaKnown RBP5□□□□□ -1.61
PDR8YLR266C SCY1P53009 804 aa4.93□□□□□ -1.62
PDR8YLR266C YKR023WP36119 530 aaKnown RBP4.89□□□□□ -1.63
PDR8YLR266C YJL171CP46992 396 aa4.87□□□□□ -1.63
PDR8YLR266C TFC8Q12308 588 aa4.84□□□□□ -1.63
PDR8YLR266C HOP09932 586 aa4.82□□□□□ -1.64
PDR8YLR266C YBL029C-AQ3E756 94 aa4.79□□□□□ -1.64
PDR8YLR266C DCD1P06773 312 aa4.77□□□□□ -1.65
PDR8YLR266C SPP1Q03012 353 aa4.73□□□□□ -1.65
PDR8YLR266C YOR238WQ08634 303 aa4.73□□□□□ -1.65
PDR8YLR266C SPT21P35209 758 aa4.71□□□□□ -1.66
PDR8YLR266C VNX1P42839 908 aa4.71□□□□□ -1.66
PDR8YLR266C MST1P07236 462 aa4.69□□□□□ -1.66
PDR8YLR266C AIR2Q12476 344 aaKnown RBP4.67□□□□□ -1.66
PDR8YLR266C FKH1P40466 484 aa4.66□□□□□ -1.66
PDR8YLR266C BMT6Q12291 365 aa4.65□□□□□ -1.67
PDR8YLR266C BCH2P36122 765 aa4.61□□□□□ -1.67
PDR8YLR266C TIF11P38912 153 aaKnown RBP4.6□□□□□ -1.67
PDR8YLR266C WSC3Q12215 556 aa4.6□□□□□ -1.67
PDR8YLR266C NSR1P27476 414 aaKnown RBP RIP-Chip data4.56□□□□□ -1.68not detected
PDR8YLR266C GTT3P39996 337 aa4.55□□□□□ -1.68
PDR8YLR266C YAP5P40574 245 aa4.54□□□□□ -1.68
PDR8YLR266C LDB19Q12502 818 aa4.5□□□□□ -1.69
PDR8YLR266C AVT3P36062 692 aa4.49□□□□□ -1.69
PDR8YLR266C EPS1P40557 701 aa4.48□□□□□ -1.69
PDR8YLR266C ULI1P43604 169 aa4.48□□□□□ -1.69
PDR8YLR266C BDF1P35817 686 aa4.45□□□□□ -1.7
PDR8YLR266C RGA2Q06407 1009 aa4.42□□□□□ -1.7
PDR8YLR266C EAP1P36041 632 aaKnown RBP4.4□□□□□ -1.7
PDR8YLR266C BCK2P33306 851 aa4.4□□□□□ -1.71
PDR8YLR266C IOC2Q12072 812 aa4.39□□□□□ -1.71
PDR8YLR266C TFG1P41895 735 aaPredicted RBP4.36□□□□□ -1.71
PDR8YLR266C NCR1Q12200 1170 aa4.36□□□□□ -1.71
PDR8YLR266C MSB4Q12317 492 aa4.36□□□□□ -1.71
PDR8YLR266C RTG1P32607 177 aa4.35□□□□□ -1.71
PDR8YLR266C RIM101P33400 625 aa4.35□□□□□ -1.71
PDR8YLR266C BBC1P47068 1157 aa4.34□□□□□ -1.71
PDR8YLR266C SEC61P32915 480 aa4.3□□□□□ -1.72
PDR8YLR266C YNL035CP53962 389 aaKnown RBP4.29□□□□□ -1.72
PDR8YLR266C CHL1P22516 861 aaPredicted RBP4.27□□□□□ -1.73
PDR8YLR266C PTP3P40048 928 aa4.26□□□□□ -1.73
PDR8YLR266C RGA1P39083 1007 aa4.25□□□□□ -1.73
PDR8YLR266C YIL055CP40523 627 aaKnown RBP4.25□□□□□ -1.73
PDR8YLR266C TRP5P00931 707 aaKnown RBP4.22□□□□□ -1.73
PDR8YLR266C XDJ1P39102 459 aa4.22□□□□□ -1.73
PDR8YLR266C SAP30P38429 201 aa4.2□□□□□ -1.74
PDR8YLR266C PRE3P38624 215 aa4.19□□□□□ -1.74
PDR8YLR266C DPS1P04802 557 aaKnown RBP4.18□□□□□ -1.74
PDR8YLR266C SET4P42948 560 aa4.18□□□□□ -1.74
PDR8YLR266C YOL036WQ08206 761 aa4.18□□□□□ -1.74
PDR8YLR266C PIB1Q06651 286 aa4.16□□□□□ -1.74
PDR8YLR266C YDL129WQ07555 291 aa4.16□□□□□ -1.74
PDR8YLR266C AI2P03876 854 aa4.14□□□□□ -1.75
PDR8YLR266C VRP1P37370 817 aa4.13□□□□□ -1.75
PDR8YLR266C JIP4Q03361 876 aa4.13□□□□□ -1.75
PDR8YLR266C RSM7P47150 247 aa4.12□□□□□ -1.75
PDR8YLR266C OXP1P28273 1286 aa4.11□□□□□ -1.75
PDR8YLR266C ABP1P15891 592 aaKnown RBP4.08□□□□□ -1.76
PDR8YLR266C ELP4Q02884 456 aaKnown RBP4.04□□□□□ -1.76
PDR8YLR266C DAN4P47179 1161 aa4.01□□□□□ -1.77
PDR8YLR266C SAM3Q08986 587 aa4□□□□□ -1.77
PDR8YLR266C HTA1P04911 132 aaKnown RBP3.98□□□□□ -1.77
PDR8YLR266C HTA2P04912 132 aa3.98□□□□□ -1.77
PDR8YLR266C YMR1P47147 688 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
PDR8YLR266C BFR2Q06631 534 aaKnown RBP3.98□□□□□ -1.77
PDR8YLR266C VMA1P17255 1071 aaKnown RBP3.97□□□□□ -1.77
PDR8YLR266C PTC4P38089 393 aa3.97□□□□□ -1.77
PDR8YLR266C SRC1Q03707 834 aa3.95□□□□□ -1.78
PDR8YLR266C YAH1Q12184 172 aaKnown RBP3.94□□□□□ -1.78
PDR8YLR266C GYP5Q12344 894 aa3.94□□□□□ -1.78
PDR8YLR266C DBP1P24784 617 aaKnown RBP3.94□□□□□ -1.78
PDR8YLR266C MRM1P25270 412 aa3.93□□□□□ -1.78
PDR8YLR266C YEL023CP39992 682 aa3.91□□□□□ -1.78
PDR8YLR266C SPT23P35210 1082 aa3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms