RNA–Protein interactions for RNA: YMR072W

ABF2, Transcript of Mitochondrial DNA-binding protein, yeastyeast

Gene ABF2, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF2YMR072W MTC1P47018 478 aaKnown RBP10.91□□□□□ -0.66
ABF2YMR072W FAP1P53971 965 aa10.62□□□□□ -0.71
ABF2YMR072W PRY3P47033 881 aa10□□□□□ -0.81
ABF2YMR072W DRS1P32892 752 aaKnown RBP9.68□□□□□ -0.86
ABF2YMR072W AAD16Q02895 342 aa9.5□□□□□ -0.89
ABF2YMR072W PRI1P10363 409 aa9.49□□□□□ -0.89
ABF2YMR072W HAA1Q12753 694 aaKnown RBP9.39□□□□□ -0.91
ABF2YMR072W YCK3P39962 524 aa9.2□□□□□ -0.94
ABF2YMR072W ISW2Q08773 1120 aa9.16□□□□□ -0.94
ABF2YMR072W RPG1P38249 964 aaKnown RBP9.08□□□□□ -0.96
ABF2YMR072W TSR3Q12094 313 aaKnown RBP8.93□□□□□ -0.98
ABF2YMR072W DIP2Q12220 943 aaPredicted RBP8.68□□□□□ -1.02
ABF2YMR072W MRPL32P25348 183 aa8.61□□□□□ -1.03
ABF2YMR072W RSE1Q04693 1361 aaKnown RBP8.53□□□□□ -1.04
ABF2YMR072W YGL015CP33199 130 aa8.4□□□□□ -1.06
ABF2YMR072W BUD31P25337 157 aaPredicted RBP8.39□□□□□ -1.07
ABF2YMR072W REB1P21538 810 aa8.31□□□□□ -1.08
ABF2YMR072W RPL17AP05740 184 aaKnown RBP8.29□□□□□ -1.08
ABF2YMR072W RPL17BP46990 184 aaKnown RBP8.29□□□□□ -1.08
ABF2YMR072W AVT3P36062 692 aa8.21□□□□□ -1.1
ABF2YMR072W CDC27P38042 758 aa8.06□□□□□ -1.12
ABF2YMR072W YKR023WP36119 530 aaKnown RBP7.92□□□□□ -1.14
ABF2YMR072W UBP10P53874 792 aaPredicted RBP7.92□□□□□ -1.14
ABF2YMR072W SPT21P35209 758 aa7.88□□□□□ -1.15
ABF2YMR072W SIS1P25294 352 aaKnown RBP7.87□□□□□ -1.15
ABF2YMR072W MAP2P38174 421 aaKnown RBP7.87□□□□□ -1.15
ABF2YMR072W BFR2Q06631 534 aaKnown RBP7.8□□□□□ -1.16
ABF2YMR072W TFC8Q12308 588 aa7.77□□□□□ -1.17
ABF2YMR072W HOP09932 586 aa7.75□□□□□ -1.17
ABF2YMR072W DCD1P06773 312 aa7.72□□□□□ -1.17
ABF2YMR072W UBP9P39967 754 aa7.63□□□□□ -1.19
ABF2YMR072W SCY1P53009 804 aa7.62□□□□□ -1.19
ABF2YMR072W TIF4632P39936 914 aaKnown RBP7.61□□□□□ -1.19
ABF2YMR072W TGL3P40308 642 aa7.58□□□□□ -1.2
ABF2YMR072W SLX5P32828 619 aaKnown RBP7.57□□□□□ -1.2
ABF2YMR072W RIM101P33400 625 aa7.51□□□□□ -1.21
ABF2YMR072W BCH2P36122 765 aa7.49□□□□□ -1.21
ABF2YMR072W EPS1P40557 701 aa7.27□□□□□ -1.25
ABF2YMR072W BDF1P35817 686 aa7.25□□□□□ -1.25
ABF2YMR072W OXP1P28273 1286 aa7.23□□□□□ -1.25
ABF2YMR072W MST1P07236 462 aa7.21□□□□□ -1.26
ABF2YMR072W YOR238WQ08634 303 aa7.16□□□□□ -1.26
ABF2YMR072W PTP3P40048 928 aa7.15□□□□□ -1.26
ABF2YMR072W YIL055CP40523 627 aaKnown RBP7.15□□□□□ -1.26
ABF2YMR072W YBL029C-AQ3E756 94 aa7.14□□□□□ -1.27
ABF2YMR072W NSR1P27476 414 aaKnown RBP RIP-Chip data7.09□□□□□ -1.27not detected
ABF2YMR072W VNX1P42839 908 aa7.06□□□□□ -1.28
ABF2YMR072W BBC1P47068 1157 aa7.06□□□□□ -1.28
ABF2YMR072W RSM7P47150 247 aa7.04□□□□□ -1.28
ABF2YMR072W YAP5P40574 245 aa7.03□□□□□ -1.28
ABF2YMR072W AI2P03876 854 aa7.01□□□□□ -1.29
ABF2YMR072W SPP1Q03012 353 aa6.99□□□□□ -1.29
ABF2YMR072W WSC3Q12215 556 aa6.97□□□□□ -1.29
ABF2YMR072W YAH1Q12184 172 aaKnown RBP6.95□□□□□ -1.3
ABF2YMR072W TIF11P38912 153 aaKnown RBP6.9□□□□□ -1.3
ABF2YMR072W GTT3P39996 337 aa6.89□□□□□ -1.31
ABF2YMR072W AIR2Q12476 344 aaKnown RBP6.89□□□□□ -1.31
ABF2YMR072W YJL171CP46992 396 aa6.88□□□□□ -1.31
ABF2YMR072W FKH1P40466 484 aa6.87□□□□□ -1.31
ABF2YMR072W YLR271WQ06152 274 aa6.82□□□□□ -1.32
ABF2YMR072W ULI1P43604 169 aa6.8□□□□□ -1.32
ABF2YMR072W LDB19Q12502 818 aa6.79□□□□□ -1.32
ABF2YMR072W PSD2P53037 1138 aaKnown RBP6.78□□□□□ -1.32
ABF2YMR072W PIB1Q06651 286 aa6.77□□□□□ -1.33
ABF2YMR072W IOC2Q12072 812 aa6.77□□□□□ -1.33
ABF2YMR072W TFA1P36100 482 aa6.75□□□□□ -1.33
ABF2YMR072W BMT6Q12291 365 aa6.74□□□□□ -1.33
ABF2YMR072W MRM1P25270 412 aa6.72□□□□□ -1.33
ABF2YMR072W MSB4Q12317 492 aa6.72□□□□□ -1.33
ABF2YMR072W EAP1P36041 632 aaKnown RBP6.69□□□□□ -1.34
ABF2YMR072W RTG1P32607 177 aa6.64□□□□□ -1.35
ABF2YMR072W SET4P42948 560 aa6.64□□□□□ -1.35
ABF2YMR072W YOL036WQ08206 761 aa6.64□□□□□ -1.35
ABF2YMR072W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
ABF2YMR072W TRP5P00931 707 aaKnown RBP6.62□□□□□ -1.35
ABF2YMR072W YMR1P47147 688 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
ABF2YMR072W SSP1P38871 571 aa6.61□□□□□ -1.35
ABF2YMR072W NCR1Q12200 1170 aa6.61□□□□□ -1.35
ABF2YMR072W DBP1P24784 617 aaKnown RBP6.6□□□□□ -1.35
ABF2YMR072W VPS29P38759 282 aa6.6□□□□□ -1.35
ABF2YMR072W YNL035CP53962 389 aaKnown RBP6.58□□□□□ -1.36
ABF2YMR072W SEC61P32915 480 aa6.57□□□□□ -1.36
ABF2YMR072W RTG3P38165 486 aa6.56□□□□□ -1.36
ABF2YMR072W YFR006WP43590 535 aa6.56□□□□□ -1.36
ABF2YMR072W VMA1P17255 1071 aaKnown RBP6.55□□□□□ -1.36
ABF2YMR072W CST9Q06032 482 aa6.54□□□□□ -1.36
ABF2YMR072W SAM3Q08986 587 aa6.54□□□□□ -1.36
ABF2YMR072W STS1P38637 319 aa6.53□□□□□ -1.36
ABF2YMR072W MGA2P40578 1113 aa6.51□□□□□ -1.37
ABF2YMR072W TFG1P41895 735 aaPredicted RBP6.5□□□□□ -1.37
ABF2YMR072W RGA2Q06407 1009 aa6.49□□□□□ -1.37
ABF2YMR072W JIP4Q03361 876 aa6.46□□□□□ -1.38
ABF2YMR072W DAN4P47179 1161 aa6.45□□□□□ -1.38
ABF2YMR072W ABP1P15891 592 aaKnown RBP6.44□□□□□ -1.38
ABF2YMR072W SAP30P38429 201 aa6.44□□□□□ -1.38
ABF2YMR072W GYP5Q12344 894 aa6.43□□□□□ -1.38
ABF2YMR072W RCR1P38212 213 aa6.42□□□□□ -1.38
ABF2YMR072W YDL129WQ07555 291 aa6.41□□□□□ -1.38
ABF2YMR072W HTA1P04911 132 aaKnown RBP6.4□□□□□ -1.38
ABF2YMR072W HTA2P04912 132 aa6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms