RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W MON2P48563 1636 aaPredicted RBP4.61□□□□□ -1.67
HER1YOR227W TY1B-DR4Q07793 1604 aa4.5□□□□□ -1.69
HER1YOR227W SWR1Q05471 1514 aa4.27□□□□□ -1.73
HER1YOR227W INO80P53115 1489 aa4.24□□□□□ -1.73
HER1YOR227W TCB3Q03640 1545 aaKnown RBP4.24□□□□□ -1.73
HER1YOR227W DRS1P32892 752 aaKnown RBP4.17□□□□□ -1.74
HER1YOR227W HSL1P34244 1518 aa4.1□□□□□ -1.75
HER1YOR227W KOG1P38873 1557 aa4.09□□□□□ -1.76
HER1YOR227W DNA2P38859 1522 aa4.07□□□□□ -1.76
HER1YOR227W PEP1P32319 1579 aa4.05□□□□□ -1.76
HER1YOR227W THO2P53552 1597 aaKnown RBP4.05□□□□□ -1.76
HER1YOR227W SIN3P22579 1536 aa4.03□□□□□ -1.76
HER1YOR227W SSK2P53599 1579 aa4.02□□□□□ -1.77
HER1YOR227W HIR3P47171 1648 aa4.01□□□□□ -1.77
HER1YOR227W ATG2P53855 1592 aa3.99□□□□□ -1.77
HER1YOR227W SGS1P35187 1447 aa3.96□□□□□ -1.78
HER1YOR227W SPT6P23615 1451 aaKnown RBP3.94□□□□□ -1.78
HER1YOR227W TFA1P36100 482 aa3.93□□□□□ -1.78
HER1YOR227W TY1B-BRQ12193 1756 aa3.91□□□□□ -1.78
HER1YOR227W TY1B-GR3Q12316 1755 aa3.91□□□□□ -1.78
HER1YOR227W TY1B-ORQ92393 1755 aa3.91□□□□□ -1.78
HER1YOR227W TY2B-LR1P0C2J3 1770 aa3.9□□□□□ -1.79
HER1YOR227W TY2B-FP0CX63 1770 aa3.9□□□□□ -1.79
HER1YOR227W TY2B-GR2P0CX64 1770 aa3.9□□□□□ -1.79
HER1YOR227W TY2B-CP25384 1770 aa3.9□□□□□ -1.79
HER1YOR227W TY2B-DR2Q03494 1770 aa3.9□□□□□ -1.79
HER1YOR227W TY1B-DR1Q03855 1755 aa3.9□□□□□ -1.79
HER1YOR227W TY2B-DR3Q07791 1770 aaKnown RBP3.9□□□□□ -1.79
HER1YOR227W TY2B-OR1Q12113 1770 aa3.9□□□□□ -1.79
HER1YOR227W TY2B-DR1Q12472 1770 aa3.9□□□□□ -1.79
HER1YOR227W TY2B-OR2Q12501 1770 aa3.9□□□□□ -1.79
HER1YOR227W SPA2P23201 1466 aaKnown RBP3.88□□□□□ -1.79
HER1YOR227W TY1B-DR3Q99231 1755 aa3.87□□□□□ -1.79
HER1YOR227W TY1B-HO13535 1793 aa3.87□□□□□ -1.79
HER1YOR227W TY1B-DR5P0C2I2 1755 aa3.87□□□□□ -1.79
HER1YOR227W TY1B-DR6P0C2I3 1755 aa3.87□□□□□ -1.79
HER1YOR227W TY1B-LR2P0C2I5 1755 aa3.87□□□□□ -1.79
HER1YOR227W TY1B-LR3P0C2I6 1755 aaKnown RBP3.87□□□□□ -1.79
HER1YOR227W TY1B-PR1P0C2I9 1755 aaKnown RBP3.87□□□□□ -1.79
HER1YOR227W TY1B-PR2P0C2J0 1756 aa3.87□□□□□ -1.79
HER1YOR227W TY1B-PR3P0C2J1 1755 aaKnown RBP3.87□□□□□ -1.79
HER1YOR227W TY1B-JR1P47098 1755 aa3.87□□□□□ -1.79
HER1YOR227W TY1B-ML2Q03434 1755 aaKnown RBP3.87□□□□□ -1.79
HER1YOR227W TY1B-ER1Q03612 1755 aa3.87□□□□□ -1.79
HER1YOR227W TY1B-ML1Q04711 1755 aaKnown RBP3.87□□□□□ -1.79
HER1YOR227W TY1B-GR2Q12269 1755 aa3.87□□□□□ -1.79
HER1YOR227W TY1B-OLQ12273 1755 aa3.87□□□□□ -1.79
HER1YOR227W TY1B-PLQ12414 1755 aaKnown RBP3.87□□□□□ -1.79
HER1YOR227W ESP1Q03018 1630 aa3.86□□□□□ -1.79
HER1YOR227W TY2B-BQ12491 1770 aa3.85□□□□□ -1.79
HER1YOR227W REV3P14284 1504 aa3.83□□□□□ -1.8
HER1YOR227W MDS3P53094 1487 aa3.83□□□□□ -1.8
HER1YOR227W MTC1P47018 478 aaKnown RBP3.78□□□□□ -1.8
HER1YOR227W BUD4P47136 1447 aa3.78□□□□□ -1.8
HER1YOR227W RPA190P10964 1664 aaKnown RBP3.76□□□□□ -1.81
HER1YOR227W SSN2P38931 1420 aa3.76□□□□□ -1.81
HER1YOR227W BFR2Q06631 534 aaKnown RBP3.76□□□□□ -1.81
HER1YOR227W TY1B-JR2P47100 1755 aaKnown RBP3.76□□□□□ -1.81
HER1YOR227W TY1B-ER2Q03619 1755 aa3.76□□□□□ -1.81
HER1YOR227W TY1B-MR1Q04214 1755 aa3.76□□□□□ -1.81
HER1YOR227W TY1B-MR2Q04670 1755 aaKnown RBP3.76□□□□□ -1.81
HER1YOR227W TY1B-LR1Q12088 1755 aaKnown RBP3.76□□□□□ -1.81
HER1YOR227W TY1B-NL1Q12112 1755 aa3.76□□□□□ -1.81
HER1YOR227W TY1B-GR1Q12141 1755 aa3.76□□□□□ -1.81
HER1YOR227W TY1B-BLQ12490 1755 aa3.76□□□□□ -1.81
HER1YOR227W XRN1P22147 1528 aaKnown RBP3.73□□□□□ -1.81
HER1YOR227W YPK9Q12697 1472 aa3.72□□□□□ -1.81
HER1YOR227W MYO2P19524 1574 aaKnown RBP3.7□□□□□ -1.82
HER1YOR227W RPO31P04051 1460 aa3.7□□□□□ -1.82
HER1YOR227W YRF1-1P0CX20 1796 aa3.69□□□□□ -1.82
HER1YOR227W YRF1-5P0CX21 1796 aa3.69□□□□□ -1.82
HER1YOR227W YRF1-8P0CX22 1796 aa3.69□□□□□ -1.82
HER1YOR227W SCC2Q04002 1493 aa3.69□□□□□ -1.82
HER1YOR227W YCF1P39109 1515 aaKnown RBP3.69□□□□□ -1.82
HER1YOR227W RPO21P04050 1733 aaKnown RBP3.67□□□□□ -1.82
HER1YOR227W BNI1P41832 1953 aa3.66□□□□□ -1.82
HER1YOR227W CDC25P04821 1589 aa3.66□□□□□ -1.82
HER1YOR227W BPT1P14772 1559 aa3.66□□□□□ -1.82
HER1YOR227W ECM5Q03214 1411 aa3.65□□□□□ -1.83
HER1YOR227W NTE1Q04958 1679 aa3.64□□□□□ -1.83
HER1YOR227W ESC1Q03661 1658 aaKnown RBP3.64□□□□□ -1.83
HER1YOR227W DNF1P32660 1571 aa3.62□□□□□ -1.83
HER1YOR227W AVT3P36062 692 aa3.59□□□□□ -1.83
HER1YOR227W RKR1Q04781 1562 aa3.59□□□□□ -1.83
HER1YOR227W POL1P13382 1468 aa3.59□□□□□ -1.84
HER1YOR227W IRC20Q06554 1556 aa3.58□□□□□ -1.84
HER1YOR227W MLP2P40457 1679 aa3.56□□□□□ -1.84
HER1YOR227W SPO14P36126 1683 aa3.55□□□□□ -1.84
HER1YOR227W TAF7Q05021 590 aa3.55□□□□□ -1.84
HER1YOR227W ULS1Q08562 1619 aa3.54□□□□□ -1.84
HER1YOR227W YOR1P53049 1477 aa3.54□□□□□ -1.84
HER1YOR227W MET5P47169 1442 aa3.53□□□□□ -1.84
HER1YOR227W TOP2P06786 1428 aaKnown RBP3.52□□□□□ -1.85
HER1YOR227W RQC2Q12532 1038 aaKnown RBP3.52□□□□□ -1.85
HER1YOR227W CHD1P32657 1468 aa3.51□□□□□ -1.85
HER1YOR227W SMC4Q12267 1418 aa3.5□□□□□ -1.85
HER1YOR227W PAN1P32521 1480 aa3.5□□□□□ -1.85
HER1YOR227W PDR12Q02785 1511 aa3.49□□□□□ -1.85
HER1YOR227W YBT1P32386 1661 aa3.49□□□□□ -1.85
HER1YOR227W SNQ2P32568 1501 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms