RNA–Protein interactions for RNA: YOR360C

PDE2, Transcript of High-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE2, Length 1,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE2YOR360C FAP1P53971 965 aa9.18□□□□□ -0.94
PDE2YOR360C PRY3P47033 881 aa8.72□□□□□ -1.01
PDE2YOR360C MTC1P47018 478 aaKnown RBP8.57□□□□□ -1.04
PDE2YOR360C HAA1Q12753 694 aaKnown RBP8.09□□□□□ -1.11
PDE2YOR360C YCK3P39962 524 aa8.05□□□□□ -1.12
PDE2YOR360C DRS1P32892 752 aaKnown RBP7.84□□□□□ -1.15
PDE2YOR360C AAD16Q02895 342 aa7.59□□□□□ -1.19
PDE2YOR360C BUD31P25337 157 aaPredicted RBP7.57□□□□□ -1.2
PDE2YOR360C PRI1P10363 409 aa7.33□□□□□ -1.24
PDE2YOR360C ISW2Q08773 1120 aa7.14□□□□□ -1.27
PDE2YOR360C RPG1P38249 964 aaKnown RBP7.08□□□□□ -1.28
PDE2YOR360C YGL015CP33199 130 aa7.03□□□□□ -1.28
PDE2YOR360C SIS1P25294 352 aaKnown RBP6.99□□□□□ -1.29
PDE2YOR360C DIP2Q12220 943 aaPredicted RBP6.95□□□□□ -1.3
PDE2YOR360C TSR3Q12094 313 aaKnown RBP6.91□□□□□ -1.3
PDE2YOR360C RSE1Q04693 1361 aaKnown RBP6.76□□□□□ -1.33
PDE2YOR360C AVT3P36062 692 aa6.65□□□□□ -1.34
PDE2YOR360C MRPL32P25348 183 aa6.65□□□□□ -1.35
PDE2YOR360C RPL17AP05740 184 aaKnown RBP6.55□□□□□ -1.36
PDE2YOR360C RPL17BP46990 184 aaKnown RBP6.55□□□□□ -1.36
PDE2YOR360C REB1P21538 810 aa6.53□□□□□ -1.36
PDE2YOR360C BFR2Q06631 534 aaKnown RBP6.44□□□□□ -1.38
PDE2YOR360C UBP9P39967 754 aa6.4□□□□□ -1.38
PDE2YOR360C CDC27P38042 758 aa6.28□□□□□ -1.4
PDE2YOR360C SPT21P35209 758 aa6.26□□□□□ -1.41
PDE2YOR360C YKR023WP36119 530 aaKnown RBP6.23□□□□□ -1.41
PDE2YOR360C UBP10P53874 792 aaPredicted RBP6.13□□□□□ -1.43
PDE2YOR360C HOP09932 586 aa6.1□□□□□ -1.43
PDE2YOR360C MAP2P38174 421 aaKnown RBP6.1□□□□□ -1.43
PDE2YOR360C TFC8Q12308 588 aa6.1□□□□□ -1.43
PDE2YOR360C DCD1P06773 312 aa6.06□□□□□ -1.44
PDE2YOR360C RGA2Q06407 1009 aa6.06□□□□□ -1.44
PDE2YOR360C RIM101P33400 625 aa6.02□□□□□ -1.45
PDE2YOR360C SCY1P53009 804 aa5.95□□□□□ -1.46
PDE2YOR360C BCH2P36122 765 aa5.9□□□□□ -1.46
PDE2YOR360C SLX5P32828 619 aaKnown RBP5.89□□□□□ -1.47
PDE2YOR360C TIF4632P39936 914 aaKnown RBP5.87□□□□□ -1.47
PDE2YOR360C TGL3P40308 642 aa5.87□□□□□ -1.47
PDE2YOR360C OXP1P28273 1286 aa5.81□□□□□ -1.48
PDE2YOR360C EPS1P40557 701 aa5.74□□□□□ -1.49
PDE2YOR360C BDF1P35817 686 aa5.72□□□□□ -1.49
PDE2YOR360C YIL055CP40523 627 aaKnown RBP5.72□□□□□ -1.49
PDE2YOR360C PTP3P40048 928 aa5.7□□□□□ -1.5
PDE2YOR360C RSM7P47150 247 aa5.64□□□□□ -1.51
PDE2YOR360C YJL171CP46992 396 aa5.63□□□□□ -1.51
PDE2YOR360C MST1P07236 462 aa5.61□□□□□ -1.51
PDE2YOR360C AI2P03876 854 aa5.6□□□□□ -1.51
PDE2YOR360C BBC1P47068 1157 aa5.6□□□□□ -1.51
PDE2YOR360C YAH1Q12184 172 aaKnown RBP5.59□□□□□ -1.51
PDE2YOR360C TFA1P36100 482 aa5.58□□□□□ -1.52
PDE2YOR360C YOR238WQ08634 303 aa5.57□□□□□ -1.52
PDE2YOR360C NSR1P27476 414 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
PDE2YOR360C YLR271WQ06152 274 aa5.52□□□□□ -1.53
PDE2YOR360C YBL029C-AQ3E756 94 aa5.51□□□□□ -1.53
PDE2YOR360C YAP5P40574 245 aa5.5□□□□□ -1.53
PDE2YOR360C VNX1P42839 908 aa5.47□□□□□ -1.53
PDE2YOR360C PSD2P53037 1138 aaKnown RBP5.45□□□□□ -1.54
PDE2YOR360C AIR2Q12476 344 aaKnown RBP5.45□□□□□ -1.54
PDE2YOR360C RGA1P39083 1007 aa5.42□□□□□ -1.54
PDE2YOR360C SPP1Q03012 353 aa5.42□□□□□ -1.54
PDE2YOR360C WSC3Q12215 556 aa5.42□□□□□ -1.54
PDE2YOR360C SSP1P38871 571 aa5.4□□□□□ -1.55
PDE2YOR360C MRM1P25270 412 aa5.38□□□□□ -1.55
PDE2YOR360C GTT3P39996 337 aa5.38□□□□□ -1.55
PDE2YOR360C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
PDE2YOR360C TIF11P38912 153 aaKnown RBP5.36□□□□□ -1.55
PDE2YOR360C PIB1Q06651 286 aa5.35□□□□□ -1.55
PDE2YOR360C CST9Q06032 482 aa5.3□□□□□ -1.56
PDE2YOR360C FKH1P40466 484 aa5.29□□□□□ -1.56
PDE2YOR360C MGA2P40578 1113 aa5.29□□□□□ -1.56
PDE2YOR360C ULI1P43604 169 aa5.29□□□□□ -1.56
PDE2YOR360C VPS29P38759 282 aa5.28□□□□□ -1.56
PDE2YOR360C IOC2Q12072 812 aa5.28□□□□□ -1.56
PDE2YOR360C YMR1P47147 688 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
PDE2YOR360C BMT6Q12291 365 aa5.27□□□□□ -1.57
PDE2YOR360C LDB19Q12502 818 aa5.27□□□□□ -1.57
PDE2YOR360C RTG3P38165 486 aa5.26□□□□□ -1.57
PDE2YOR360C DBP1P24784 617 aaKnown RBP5.25□□□□□ -1.57
PDE2YOR360C MSB4Q12317 492 aa5.25□□□□□ -1.57
PDE2YOR360C EAP1P36041 632 aaKnown RBP5.23□□□□□ -1.57
PDE2YOR360C YFR006WP43590 535 aa5.23□□□□□ -1.57
PDE2YOR360C YOL036WQ08206 761 aa5.22□□□□□ -1.57
PDE2YOR360C STS1P38637 319 aa5.21□□□□□ -1.57
PDE2YOR360C SET4P42948 560 aa5.21□□□□□ -1.57
PDE2YOR360C VMA1P17255 1071 aaKnown RBP5.2□□□□□ -1.58
PDE2YOR360C TRP5P00931 707 aaKnown RBP5.19□□□□□ -1.58
PDE2YOR360C RCR1P38212 213 aa5.19□□□□□ -1.58
PDE2YOR360C SAM3Q08986 587 aa5.19□□□□□ -1.58
PDE2YOR360C RTG1P32607 177 aa5.17□□□□□ -1.58
PDE2YOR360C NCR1Q12200 1170 aa5.16□□□□□ -1.58
PDE2YOR360C YNL035CP53962 389 aaKnown RBP5.14□□□□□ -1.59
PDE2YOR360C SEC61P32915 480 aa5.13□□□□□ -1.59
PDE2YOR360C GYP5Q12344 894 aa5.1□□□□□ -1.59
PDE2YOR360C ABP1P15891 592 aaKnown RBP5.08□□□□□ -1.6
PDE2YOR360C DAN4P47179 1161 aa5.08□□□□□ -1.6
PDE2YOR360C JIP4Q03361 876 aa5.08□□□□□ -1.6
PDE2YOR360C TFG1P41895 735 aaPredicted RBP5.07□□□□□ -1.6
PDE2YOR360C HTA1P04911 132 aaKnown RBP5.06□□□□□ -1.6
PDE2YOR360C HTA2P04912 132 aa5.06□□□□□ -1.6
PDE2YOR360C DCW1P36091 449 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms