RNA–Protein interactions for RNA: YLR176C

RFX1, Transcript of Major transcriptional repressor of DNA-damage-regulated genes, yeastyeast

Gene RFX1, Length 2,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFX1YLR176C MTC1P47018 478 aaKnown RBP6.96□□□□□ -1.3
RFX1YLR176C DRS1P32892 752 aaKnown RBP6.51□□□□□ -1.37
RFX1YLR176C FAP1P53971 965 aa6.28□□□□□ -1.4
RFX1YLR176C YCK3P39962 524 aa6.05□□□□□ -1.44
RFX1YLR176C PRI1P10363 409 aa6.01□□□□□ -1.45
RFX1YLR176C PRY3P47033 881 aa5.97□□□□□ -1.45
RFX1YLR176C AAD16Q02895 342 aa5.87□□□□□ -1.47
RFX1YLR176C RPG1P38249 964 aaKnown RBP5.7□□□□□ -1.5
RFX1YLR176C ISW2Q08773 1120 aa5.64□□□□□ -1.51
RFX1YLR176C TSR3Q12094 313 aaKnown RBP5.62□□□□□ -1.51
RFX1YLR176C BFR2Q06631 534 aaKnown RBP5.57□□□□□ -1.52
RFX1YLR176C DIP2Q12220 943 aaPredicted RBP5.57□□□□□ -1.52
RFX1YLR176C HAA1Q12753 694 aaKnown RBP5.55□□□□□ -1.52
RFX1YLR176C AVT3P36062 692 aa5.46□□□□□ -1.53
RFX1YLR176C RSE1Q04693 1361 aaKnown RBP5.34□□□□□ -1.55
RFX1YLR176C MRPL32P25348 183 aa5.24□□□□□ -1.57
RFX1YLR176C RPL17AP05740 184 aaKnown RBP5.21□□□□□ -1.58
RFX1YLR176C CDC27P38042 758 aa5.21□□□□□ -1.58
RFX1YLR176C RPL17BP46990 184 aaKnown RBP5.21□□□□□ -1.58
RFX1YLR176C SPT21P35209 758 aa5.2□□□□□ -1.58
RFX1YLR176C YKR023WP36119 530 aaKnown RBP5.17□□□□□ -1.58
RFX1YLR176C TFA1P36100 482 aa5.13□□□□□ -1.59
RFX1YLR176C REB1P21538 810 aa5.12□□□□□ -1.59
RFX1YLR176C YGL015CP33199 130 aa5.11□□□□□ -1.59
RFX1YLR176C DCD1P06773 312 aa5.03□□□□□ -1.6
RFX1YLR176C TFC8Q12308 588 aa5□□□□□ -1.61
RFX1YLR176C MAP2P38174 421 aaKnown RBP4.99□□□□□ -1.61
RFX1YLR176C HOP09932 586 aa4.97□□□□□ -1.61
RFX1YLR176C UBP10P53874 792 aaPredicted RBP4.92□□□□□ -1.62
RFX1YLR176C RIM101P33400 625 aa4.91□□□□□ -1.62
RFX1YLR176C BUD31P25337 157 aaPredicted RBP4.88□□□□□ -1.63
RFX1YLR176C BCH2P36122 765 aa4.85□□□□□ -1.63
RFX1YLR176C OXP1P28273 1286 aa4.8□□□□□ -1.64
RFX1YLR176C SCY1P53009 804 aa4.8□□□□□ -1.64
RFX1YLR176C TGL3P40308 642 aa4.71□□□□□ -1.66
RFX1YLR176C BDF1P35817 686 aa4.68□□□□□ -1.66
RFX1YLR176C SLX5P32828 619 aaKnown RBP4.67□□□□□ -1.66
RFX1YLR176C EPS1P40557 701 aa4.65□□□□□ -1.66
RFX1YLR176C MST1P07236 462 aa4.62□□□□□ -1.67
RFX1YLR176C YIL055CP40523 627 aaKnown RBP4.6□□□□□ -1.67
RFX1YLR176C YAH1Q12184 172 aaKnown RBP4.6□□□□□ -1.67
RFX1YLR176C PTP3P40048 928 aa4.59□□□□□ -1.67
RFX1YLR176C TIF4632P39936 914 aaKnown RBP4.58□□□□□ -1.68
RFX1YLR176C SSP1P38871 571 aa4.54□□□□□ -1.68
RFX1YLR176C RSM7P47150 247 aa4.52□□□□□ -1.69
RFX1YLR176C YLR271WQ06152 274 aa4.52□□□□□ -1.69
RFX1YLR176C NSR1P27476 414 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
RFX1YLR176C YBL029C-AQ3E756 94 aa4.5□□□□□ -1.69
RFX1YLR176C AI2P03876 854 aa4.5□□□□□ -1.69
RFX1YLR176C PSD2P53037 1138 aaKnown RBP4.48□□□□□ -1.69
RFX1YLR176C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
RFX1YLR176C VNX1P42839 908 aa4.44□□□□□ -1.7
RFX1YLR176C SIS1P25294 352 aaKnown RBP4.43□□□□□ -1.7
RFX1YLR176C UBP9P39967 754 aa4.43□□□□□ -1.7
RFX1YLR176C BBC1P47068 1157 aa4.43□□□□□ -1.7
RFX1YLR176C YOR238WQ08634 303 aa4.4□□□□□ -1.7
RFX1YLR176C MGA2P40578 1113 aa4.38□□□□□ -1.71
RFX1YLR176C CST9Q06032 482 aa4.38□□□□□ -1.71
RFX1YLR176C YAP5P40574 245 aa4.36□□□□□ -1.71
RFX1YLR176C AIR2Q12476 344 aaKnown RBP4.36□□□□□ -1.71
RFX1YLR176C RCR1P38212 213 aa4.34□□□□□ -1.72
RFX1YLR176C VPS29P38759 282 aa4.34□□□□□ -1.72
RFX1YLR176C IOC2Q12072 812 aa4.33□□□□□ -1.72
RFX1YLR176C MRM1P25270 412 aa4.32□□□□□ -1.72
RFX1YLR176C PIB1Q06651 286 aa4.31□□□□□ -1.72
RFX1YLR176C FKH1P40466 484 aa4.31□□□□□ -1.72
RFX1YLR176C STS1P38637 319 aa4.3□□□□□ -1.72
RFX1YLR176C WSC3Q12215 556 aa4.29□□□□□ -1.72
RFX1YLR176C SPP1Q03012 353 aa4.27□□□□□ -1.73
RFX1YLR176C TIF11P38912 153 aaKnown RBP4.26□□□□□ -1.73
RFX1YLR176C LDB19Q12502 818 aa4.25□□□□□ -1.73
RFX1YLR176C RTG3P38165 486 aa4.24□□□□□ -1.73
RFX1YLR176C DBP1P24784 617 aaKnown RBP4.22□□□□□ -1.73
RFX1YLR176C YFR006WP43590 535 aa4.21□□□□□ -1.74
RFX1YLR176C VMA1P17255 1071 aaKnown RBP4.2□□□□□ -1.74
RFX1YLR176C DMA1P38823 416 aa4.2□□□□□ -1.74
RFX1YLR176C YOL036WQ08206 761 aa4.2□□□□□ -1.74
RFX1YLR176C RQC2Q12532 1038 aaKnown RBP4.2□□□□□ -1.74
RFX1YLR176C YMR1P47147 688 aaKnown RBP RIP-Chip data4.2□□□□□ -1.74not detected
RFX1YLR176C DAN4P47179 1161 aa4.2□□□□□ -1.74
RFX1YLR176C SAM3Q08986 587 aa4.2□□□□□ -1.74
RFX1YLR176C RAM2P29703 316 aa4.19□□□□□ -1.74
RFX1YLR176C ULI1P43604 169 aa4.19□□□□□ -1.74
RFX1YLR176C TRP5P00931 707 aaKnown RBP4.18□□□□□ -1.74
RFX1YLR176C YDR344CQ05510 147 aa4.18□□□□□ -1.74
RFX1YLR176C SET4P42948 560 aa4.17□□□□□ -1.74
RFX1YLR176C MSB4Q12317 492 aa4.16□□□□□ -1.74
RFX1YLR176C NST1P53935 1240 aa4.15□□□□□ -1.75
RFX1YLR176C MAK11P20484 414 aaKnown RBP4.13□□□□□ -1.75
RFX1YLR176C RTG1P32607 177 aa4.11□□□□□ -1.75
RFX1YLR176C GTT3P39996 337 aa4.11□□□□□ -1.75
RFX1YLR176C EDS1P38073 919 aa4.09□□□□□ -1.75
RFX1YLR176C MIF2P35201 549 aa4.09□□□□□ -1.76
RFX1YLR176C SOL3P38858 249 aa4.08□□□□□ -1.76
RFX1YLR176C BMT6Q12291 365 aa4.08□□□□□ -1.76
RFX1YLR176C COQ8P27697 501 aa4.07□□□□□ -1.76
RFX1YLR176C SEC61P32915 480 aa4.07□□□□□ -1.76
RFX1YLR176C SET1P38827 1080 aaKnown RBP4.07□□□□□ -1.76
RFX1YLR176C YNL035CP53962 389 aaKnown RBP4.07□□□□□ -1.76
RFX1YLR176C NCR1Q12200 1170 aa4.07□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms