RNA–Protein interactions for RNA: YDR285W

ZIP1, Transcript of Transverse filament protein of the synaptonemal complex, yeastyeast

Gene ZIP1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ZIP1YDR285W FAP1P53971 965 aa8.28□□□□□ -1.08
ZIP1YDR285W PRY3P47033 881 aa7.76□□□□□ -1.17
ZIP1YDR285W MTC1P47018 478 aaKnown RBP7.43□□□□□ -1.22
ZIP1YDR285W HAA1Q12753 694 aaKnown RBP7.27□□□□□ -1.25
ZIP1YDR285W AAD16Q02895 342 aa7.17□□□□□ -1.26
ZIP1YDR285W PRI1P10363 409 aa6.91□□□□□ -1.3
ZIP1YDR285W YCK3P39962 524 aa6.82□□□□□ -1.32
ZIP1YDR285W ISW2Q08773 1120 aa6.62□□□□□ -1.35
ZIP1YDR285W TSR3Q12094 313 aaKnown RBP6.51□□□□□ -1.37
ZIP1YDR285W YGL015CP33199 130 aa6.5□□□□□ -1.37
ZIP1YDR285W MRPL32P25348 183 aa6.46□□□□□ -1.38
ZIP1YDR285W RPG1P38249 964 aaKnown RBP6.44□□□□□ -1.38
ZIP1YDR285W BUD31P25337 157 aaPredicted RBP6.38□□□□□ -1.39
ZIP1YDR285W SIS1P25294 352 aaKnown RBP6.16□□□□□ -1.42
ZIP1YDR285W UBP9P39967 754 aa5.99□□□□□ -1.45
ZIP1YDR285W UBP10P53874 792 aaPredicted RBP5.81□□□□□ -1.48
ZIP1YDR285W REB1P21538 810 aa5.8□□□□□ -1.48
ZIP1YDR285W DRS1P32892 752 aaKnown RBP5.79□□□□□ -1.48
ZIP1YDR285W RSE1Q04693 1361 aaKnown RBP5.75□□□□□ -1.49
ZIP1YDR285W TIF4632P39936 914 aaKnown RBP5.74□□□□□ -1.49
ZIP1YDR285W MAP2P38174 421 aaKnown RBP5.66□□□□□ -1.5
ZIP1YDR285W RPL17AP05740 184 aaKnown RBP5.61□□□□□ -1.51
ZIP1YDR285W RPL17BP46990 184 aaKnown RBP5.61□□□□□ -1.51
ZIP1YDR285W CDC27P38042 758 aa5.61□□□□□ -1.51
ZIP1YDR285W TGL3P40308 642 aa5.58□□□□□ -1.52
ZIP1YDR285W SLX5P32828 619 aaKnown RBP5.49□□□□□ -1.53
ZIP1YDR285W DIP2Q12220 943 aaPredicted RBP5.48□□□□□ -1.53
ZIP1YDR285W YJL171CP46992 396 aa5.42□□□□□ -1.54
ZIP1YDR285W SCY1P53009 804 aa5.4□□□□□ -1.55
ZIP1YDR285W YKR023WP36119 530 aaKnown RBP5.27□□□□□ -1.57
ZIP1YDR285W HOP09932 586 aa5.26□□□□□ -1.57
ZIP1YDR285W TFC8Q12308 588 aa5.24□□□□□ -1.57
ZIP1YDR285W YBL029C-AQ3E756 94 aa5.24□□□□□ -1.57
ZIP1YDR285W SPP1Q03012 353 aa5.22□□□□□ -1.57
ZIP1YDR285W YOR238WQ08634 303 aa5.19□□□□□ -1.58
ZIP1YDR285W DCD1P06773 312 aa5.18□□□□□ -1.58
ZIP1YDR285W VNX1P42839 908 aa5.13□□□□□ -1.59
ZIP1YDR285W BMT6Q12291 365 aa5.13□□□□□ -1.59
ZIP1YDR285W WSC3Q12215 556 aa5.09□□□□□ -1.59
ZIP1YDR285W AIR2Q12476 344 aaKnown RBP5.09□□□□□ -1.6
ZIP1YDR285W FKH1P40466 484 aa5.07□□□□□ -1.6
ZIP1YDR285W MST1P07236 462 aa5.06□□□□□ -1.6
ZIP1YDR285W GTT3P39996 337 aa5.06□□□□□ -1.6
ZIP1YDR285W TIF11P38912 153 aaKnown RBP5.04□□□□□ -1.6
ZIP1YDR285W SPT21P35209 758 aa5.04□□□□□ -1.6
ZIP1YDR285W BCH2P36122 765 aa4.99□□□□□ -1.61
ZIP1YDR285W YAP5P40574 245 aa4.96□□□□□ -1.61
ZIP1YDR285W BFR2Q06631 534 aaKnown RBP4.94□□□□□ -1.62
ZIP1YDR285W LDB19Q12502 818 aa4.93□□□□□ -1.62
ZIP1YDR285W ULI1P43604 169 aa4.92□□□□□ -1.62
ZIP1YDR285W NSR1P27476 414 aaKnown RBP RIP-Chip data4.91□□□□□ -1.62not detected
ZIP1YDR285W AVT3P36062 692 aa4.89□□□□□ -1.63
ZIP1YDR285W EPS1P40557 701 aa4.86□□□□□ -1.63
ZIP1YDR285W TFG1P41895 735 aaPredicted RBP4.86□□□□□ -1.63
ZIP1YDR285W BCK2P33306 851 aa4.83□□□□□ -1.64
ZIP1YDR285W EAP1P36041 632 aaKnown RBP4.83□□□□□ -1.64
ZIP1YDR285W BDF1P35817 686 aa4.82□□□□□ -1.64
ZIP1YDR285W RGA2Q06407 1009 aa4.79□□□□□ -1.64
ZIP1YDR285W NCR1Q12200 1170 aa4.79□□□□□ -1.64
ZIP1YDR285W RTG1P32607 177 aa4.77□□□□□ -1.65
ZIP1YDR285W BBC1P47068 1157 aa4.76□□□□□ -1.65
ZIP1YDR285W IOC2Q12072 812 aa4.75□□□□□ -1.65
ZIP1YDR285W MSB4Q12317 492 aa4.75□□□□□ -1.65
ZIP1YDR285W TFA1P36100 482 aa4.71□□□□□ -1.66
ZIP1YDR285W SEC61P32915 480 aa4.69□□□□□ -1.66
ZIP1YDR285W YNL035CP53962 389 aaKnown RBP4.69□□□□□ -1.66
ZIP1YDR285W YIL055CP40523 627 aaKnown RBP4.68□□□□□ -1.66
ZIP1YDR285W CHL1P22516 861 aaPredicted RBP4.68□□□□□ -1.66
ZIP1YDR285W PTP3P40048 928 aa4.67□□□□□ -1.66
ZIP1YDR285W RIM101P33400 625 aa4.66□□□□□ -1.66
ZIP1YDR285W RGA1P39083 1007 aa4.64□□□□□ -1.67
ZIP1YDR285W SAP30P38429 201 aa4.61□□□□□ -1.67
ZIP1YDR285W XDJ1P39102 459 aa4.61□□□□□ -1.67
ZIP1YDR285W DPS1P04802 557 aaKnown RBP4.6□□□□□ -1.67
ZIP1YDR285W TRP5P00931 707 aaKnown RBP4.59□□□□□ -1.67
ZIP1YDR285W PRE3P38624 215 aa4.58□□□□□ -1.68
ZIP1YDR285W SET4P42948 560 aa4.57□□□□□ -1.68
ZIP1YDR285W PIB1Q06651 286 aa4.56□□□□□ -1.68
ZIP1YDR285W YDL129WQ07555 291 aa4.54□□□□□ -1.68
ZIP1YDR285W YOL036WQ08206 761 aa4.54□□□□□ -1.68
ZIP1YDR285W VRP1P37370 817 aa4.53□□□□□ -1.68
ZIP1YDR285W JIP4Q03361 876 aa4.51□□□□□ -1.69
ZIP1YDR285W AI2P03876 854 aa4.49□□□□□ -1.69
ZIP1YDR285W RSM7P47150 247 aa4.47□□□□□ -1.69
ZIP1YDR285W ELP4Q02884 456 aaKnown RBP4.46□□□□□ -1.69
ZIP1YDR285W ABP1P15891 592 aaKnown RBP4.44□□□□□ -1.7
ZIP1YDR285W OXP1P28273 1286 aa4.39□□□□□ -1.71
ZIP1YDR285W HTA1P04911 132 aaKnown RBP4.35□□□□□ -1.71
ZIP1YDR285W HTA2P04912 132 aa4.35□□□□□ -1.71
ZIP1YDR285W GBP2P25555 427 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
ZIP1YDR285W YMR1P47147 688 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
ZIP1YDR285W DAN4P47179 1161 aa4.31□□□□□ -1.72
ZIP1YDR285W PTC4P38089 393 aa4.31□□□□□ -1.72
ZIP1YDR285W SAM3Q08986 587 aa4.31□□□□□ -1.72
ZIP1YDR285W YAH1Q12184 172 aaKnown RBP4.31□□□□□ -1.72
ZIP1YDR285W GYP5Q12344 894 aa4.31□□□□□ -1.72
ZIP1YDR285W VMA1P17255 1071 aaKnown RBP4.3□□□□□ -1.72
ZIP1YDR285W DBP1P24784 617 aaKnown RBP4.28□□□□□ -1.72
ZIP1YDR285W MRM1P25270 412 aa4.27□□□□□ -1.73
ZIP1YDR285W PEX29Q03370 554 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms