RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C MTC1P47018 478 aaKnown RBP8.17□□□□□ -1.1
SSS1YDR086C DRS1P32892 752 aaKnown RBP7.61□□□□□ -1.19
SSS1YDR086C FAP1P53971 965 aa7.4□□□□□ -1.22
SSS1YDR086C PRY3P47033 881 aa6.96□□□□□ -1.3
SSS1YDR086C PRI1P10363 409 aa6.89□□□□□ -1.31
SSS1YDR086C AAD16Q02895 342 aa6.86□□□□□ -1.31
SSS1YDR086C ISW2Q08773 1120 aa6.78□□□□□ -1.32
SSS1YDR086C RPG1P38249 964 aaKnown RBP6.7□□□□□ -1.34
SSS1YDR086C DIP2Q12220 943 aaPredicted RBP6.68□□□□□ -1.34
SSS1YDR086C YCK3P39962 524 aa6.54□□□□□ -1.36
SSS1YDR086C HAA1Q12753 694 aaKnown RBP6.54□□□□□ -1.36
SSS1YDR086C TSR3Q12094 313 aaKnown RBP6.53□□□□□ -1.36
SSS1YDR086C RSE1Q04693 1361 aaKnown RBP6.45□□□□□ -1.38
SSS1YDR086C AVT3P36062 692 aa6.41□□□□□ -1.38
SSS1YDR086C BFR2Q06631 534 aaKnown RBP6.32□□□□□ -1.4
SSS1YDR086C RPL17AP05740 184 aaKnown RBP6.26□□□□□ -1.41
SSS1YDR086C MRPL32P25348 183 aa6.26□□□□□ -1.41
SSS1YDR086C RPL17BP46990 184 aaKnown RBP6.26□□□□□ -1.41
SSS1YDR086C REB1P21538 810 aa6.24□□□□□ -1.41
SSS1YDR086C YGL015CP33199 130 aa6.05□□□□□ -1.44
SSS1YDR086C SPT21P35209 758 aa5.98□□□□□ -1.45
SSS1YDR086C CDC27P38042 758 aa5.95□□□□□ -1.46
SSS1YDR086C YKR023WP36119 530 aaKnown RBP5.91□□□□□ -1.46
SSS1YDR086C HOP09932 586 aa5.82□□□□□ -1.48
SSS1YDR086C UBP10P53874 792 aaPredicted RBP5.82□□□□□ -1.48
SSS1YDR086C DCD1P06773 312 aa5.8□□□□□ -1.48
SSS1YDR086C TFC8Q12308 588 aa5.8□□□□□ -1.48
SSS1YDR086C MAP2P38174 421 aaKnown RBP5.77□□□□□ -1.49
SSS1YDR086C RIM101P33400 625 aa5.75□□□□□ -1.49
SSS1YDR086C SCY1P53009 804 aa5.66□□□□□ -1.5
SSS1YDR086C BCH2P36122 765 aa5.61□□□□□ -1.51
SSS1YDR086C TIF4632P39936 914 aaKnown RBP5.59□□□□□ -1.51
SSS1YDR086C SLX5P32828 619 aaKnown RBP5.58□□□□□ -1.52
SSS1YDR086C OXP1P28273 1286 aa5.56□□□□□ -1.52
SSS1YDR086C TGL3P40308 642 aa5.56□□□□□ -1.52
SSS1YDR086C BUD31P25337 157 aaPredicted RBP5.55□□□□□ -1.52
SSS1YDR086C TFA1P36100 482 aa5.52□□□□□ -1.53
SSS1YDR086C PTP3P40048 928 aa5.51□□□□□ -1.53
SSS1YDR086C YIL055CP40523 627 aaKnown RBP5.49□□□□□ -1.53
SSS1YDR086C EPS1P40557 701 aa5.47□□□□□ -1.53
SSS1YDR086C BDF1P35817 686 aa5.45□□□□□ -1.54
SSS1YDR086C UBP9P39967 754 aa5.43□□□□□ -1.54
SSS1YDR086C YAH1Q12184 172 aaKnown RBP5.43□□□□□ -1.54
SSS1YDR086C RSM7P47150 247 aa5.41□□□□□ -1.54
SSS1YDR086C BBC1P47068 1157 aa5.37□□□□□ -1.55
SSS1YDR086C AI2P03876 854 aa5.36□□□□□ -1.55
SSS1YDR086C NSR1P27476 414 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
SSS1YDR086C MST1P07236 462 aa5.32□□□□□ -1.56
SSS1YDR086C YLR271WQ06152 274 aa5.31□□□□□ -1.56
SSS1YDR086C YOR238WQ08634 303 aa5.29□□□□□ -1.56
SSS1YDR086C SIS1P25294 352 aaKnown RBP5.28□□□□□ -1.56
SSS1YDR086C YAP5P40574 245 aa5.25□□□□□ -1.57
SSS1YDR086C PSD2P53037 1138 aaKnown RBP5.24□□□□□ -1.57
SSS1YDR086C SSP1P38871 571 aa5.23□□□□□ -1.57
SSS1YDR086C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
SSS1YDR086C YBL029C-AQ3E756 94 aa5.22□□□□□ -1.57
SSS1YDR086C MRM1P25270 412 aa5.18□□□□□ -1.58
SSS1YDR086C VNX1P42839 908 aa5.15□□□□□ -1.59
SSS1YDR086C CST9Q06032 482 aa5.14□□□□□ -1.59
SSS1YDR086C WSC3Q12215 556 aa5.14□□□□□ -1.59
SSS1YDR086C GTT3P39996 337 aa5.13□□□□□ -1.59
SSS1YDR086C PIB1Q06651 286 aa5.13□□□□□ -1.59
SSS1YDR086C MGA2P40578 1113 aa5.12□□□□□ -1.59
SSS1YDR086C SPP1Q03012 353 aa5.11□□□□□ -1.59
SSS1YDR086C TIF11P38912 153 aaKnown RBP5.08□□□□□ -1.6
SSS1YDR086C RTG3P38165 486 aa5.05□□□□□ -1.6
SSS1YDR086C VPS29P38759 282 aa5.04□□□□□ -1.6
SSS1YDR086C YMR1P47147 688 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
SSS1YDR086C MSB4Q12317 492 aa5.04□□□□□ -1.6
SSS1YDR086C DBP1P24784 617 aaKnown RBP5.03□□□□□ -1.6
SSS1YDR086C YFR006WP43590 535 aa5.03□□□□□ -1.6
SSS1YDR086C EAP1P36041 632 aaKnown RBP5.02□□□□□ -1.61
SSS1YDR086C RCR1P38212 213 aa5.02□□□□□ -1.61
SSS1YDR086C STS1P38637 319 aa5.01□□□□□ -1.61
SSS1YDR086C FKH1P40466 484 aa5.01□□□□□ -1.61
SSS1YDR086C ULI1P43604 169 aa5□□□□□ -1.61
SSS1YDR086C SET4P42948 560 aa4.98□□□□□ -1.61
SSS1YDR086C YJL171CP46992 396 aa4.98□□□□□ -1.61
SSS1YDR086C YOL036WQ08206 761 aa4.98□□□□□ -1.61
SSS1YDR086C IOC2Q12072 812 aa4.98□□□□□ -1.61
SSS1YDR086C AIR2Q12476 344 aaKnown RBP4.98□□□□□ -1.61
SSS1YDR086C LDB19Q12502 818 aa4.98□□□□□ -1.61
SSS1YDR086C VMA1P17255 1071 aaKnown RBP4.97□□□□□ -1.61
SSS1YDR086C SAM3Q08986 587 aa4.96□□□□□ -1.62
SSS1YDR086C ABP1P15891 592 aaKnown RBP4.94□□□□□ -1.62
SSS1YDR086C TRP5P00931 707 aaKnown RBP4.93□□□□□ -1.62
SSS1YDR086C BMT6Q12291 365 aa4.92□□□□□ -1.62
SSS1YDR086C YNL035CP53962 389 aaKnown RBP4.91□□□□□ -1.62
SSS1YDR086C RTG1P32607 177 aa4.9□□□□□ -1.63
SSS1YDR086C SEC61P32915 480 aa4.9□□□□□ -1.63
SSS1YDR086C NCR1Q12200 1170 aa4.88□□□□□ -1.63
SSS1YDR086C JIP4Q03361 876 aa4.87□□□□□ -1.63
SSS1YDR086C GYP5Q12344 894 aa4.87□□□□□ -1.63
SSS1YDR086C TFG1P41895 735 aaPredicted RBP4.86□□□□□ -1.63
SSS1YDR086C RAM2P29703 316 aa4.85□□□□□ -1.63
SSS1YDR086C HTA1P04911 132 aaKnown RBP4.84□□□□□ -1.63
SSS1YDR086C HTA2P04912 132 aa4.84□□□□□ -1.63
SSS1YDR086C MAK11P20484 414 aaKnown RBP4.84□□□□□ -1.63
SSS1YDR086C DCW1P36091 449 aa4.84□□□□□ -1.63
SSS1YDR086C MIF2P35201 549 aa4.83□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms