RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W RQC2Q12532 1038 aaKnown RBP3.47□□□□□ -1.85
USO1YDL058W TFA1P36100 482 aa3.24□□□□□ -1.89
USO1YDL058W MTC1P47018 478 aaKnown RBP3.19□□□□□ -1.9
USO1YDL058W DRS1P32892 752 aaKnown RBP3.19□□□□□ -1.9
USO1YDL058W TAF7Q05021 590 aa3.13□□□□□ -1.91
USO1YDL058W BFR2Q06631 534 aaKnown RBP2.96□□□□□ -1.94
USO1YDL058W AIM44Q99299 758 aa2.95□□□□□ -1.94
USO1YDL058W AVT3P36062 692 aa2.92□□□□□ -1.94
USO1YDL058W LEO1P38439 464 aa2.91□□□□□ -1.94
USO1YDL058W SCT1P32784 759 aa2.9□□□□□ -1.95
USO1YDL058W MNN4P36044 1178 aa2.88□□□□□ -1.95
USO1YDL058W FPR3P38911 411 aaKnown RBP2.84□□□□□ -1.95
USO1YDL058W LEU3P08638 886 aa2.83□□□□□ -1.96
USO1YDL058W YRB30P53107 440 aaPredicted RBP2.81□□□□□ -1.96
USO1YDL058W NOP2P40991 618 aaKnown RBP2.79□□□□□ -1.96
USO1YDL058W TOP1P04786 769 aa2.77□□□□□ -1.97
USO1YDL058W ASF1P32447 279 aa2.77□□□□□ -1.97
USO1YDL058W MON2P48563 1636 aaPredicted RBP2.76□□□□□ -1.97
USO1YDL058W HGH1P48362 394 aaKnown RBP2.74□□□□□ -1.97
USO1YDL058W DIP2Q12220 943 aaPredicted RBP2.73□□□□□ -1.97
USO1YDL058W SAS10Q12136 610 aaPredicted RBP2.73□□□□□ -1.97
USO1YDL058W FAP1P53971 965 aa2.73□□□□□ -1.97
USO1YDL058W QCR6P00127 147 aa2.72□□□□□ -1.97
USO1YDL058W RNA1P11745 407 aaKnown RBP2.72□□□□□ -1.97
USO1YDL058W NAP1P25293 417 aaKnown RBP2.72□□□□□ -1.97
USO1YDL058W NAB3P38996 802 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
USO1YDL058W DOS2P54858 310 aa2.71□□□□□ -1.98
USO1YDL058W IFH1P39520 1085 aa2.71□□□□□ -1.98
USO1YDL058W CAB3P36076 571 aa2.7□□□□□ -1.98
USO1YDL058W NOP53Q12080 455 aaKnown RBP2.69□□□□□ -1.98
USO1YDL058W FUN12P39730 1002 aaKnown RBP2.68□□□□□ -1.98
USO1YDL058W ORC1P54784 914 aaPredicted RBP2.68□□□□□ -1.98
USO1YDL058W YGL081WP53156 320 aa2.67□□□□□ -1.98
USO1YDL058W RPN1P38764 993 aaKnown RBP2.67□□□□□ -1.98
USO1YDL058W SVF1Q05515 481 aa2.65□□□□□ -1.98
USO1YDL058W CKB1P43639 278 aa2.65□□□□□ -1.99
USO1YDL058W NOP8Q08287 484 aaPredicted RBP2.64□□□□□ -1.99
USO1YDL058W RPS0AP32905 252 aaKnown RBP2.63□□□□□ -1.99
USO1YDL058W FPR4Q06205 392 aaPredicted RBP2.63□□□□□ -1.99
USO1YDL058W DPB3P27344 201 aa2.62□□□□□ -1.99
USO1YDL058W DEF1P35732 738 aaKnown RBP2.62□□□□□ -1.99
USO1YDL058W RLF2Q12495 606 aa2.62□□□□□ -1.99
USO1YDL058W HSC82P15108 705 aaKnown RBP2.61□□□□□ -1.99
USO1YDL058W HSP82P02829 709 aaKnown RBP2.6□□□□□ -1.99
USO1YDL058W SUB1P54000 292 aaKnown RBP2.6□□□□□ -1.99
USO1YDL058W MAK21Q12176 1025 aaKnown RBP2.6□□□□□ -1.99
USO1YDL058W MFT1P33441 392 aaKnown RBP2.59□□□□□ -2
USO1YDL058W SIS2P36024 562 aa2.59□□□□□ -2
USO1YDL058W RPS0BP46654 252 aaKnown RBP2.58□□□□□ -2
USO1YDL058W YJL049WP47048 450 aa2.58□□□□□ -2
USO1YDL058W EBP2P36049 427 aaKnown RBP2.57□□□□□ -2
USO1YDL058W MAK16P10962 306 aaPredicted RBP2.57□□□□□ -2
USO1YDL058W AIM7Q12156 149 aa2.57□□□□□ -2
USO1YDL058W RSE1Q04693 1361 aaKnown RBP2.57□□□□□ -2
USO1YDL058W OSW7P43611 510 aa2.56□□□□□ -2
USO1YDL058W CEF1Q03654 590 aaPredicted RBP2.55□□□□□ -2
USO1YDL058W RIM101P33400 625 aa2.55□□□□□ -2
USO1YDL058W RMD1Q03441 430 aa2.55□□□□□ -2
USO1YDL058W VMS1Q04311 632 aaKnown RBP2.55□□□□□ -2
USO1YDL058W SLD2P34252 453 aa2.55□□□□□ -2
USO1YDL058W NMD2P38798 1089 aaKnown RBP2.55□□□□□ -2
USO1YDL058W YPR148CQ06523 435 aa2.55□□□□□ -2
USO1YDL058W ARP8Q12386 881 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
USO1YDL058W RIX1P38883 763 aaPredicted RBP2.54□□□□□ -2
USO1YDL058W VPS72Q03388 795 aa2.54□□□□□ -2
USO1YDL058W RLP24Q07915 199 aaKnown RBP2.54□□□□□ -2
USO1YDL058W KRI1P42846 591 aaKnown RBP2.53□□□□□ -2
USO1YDL058W NOP7P53261 605 aaKnown RBP2.53□□□□□ -2
USO1YDL058W ESF2P53743 316 aaKnown RBP2.53□□□□□ -2
USO1YDL058W PAP2P53632 584 aaKnown RBP2.53□□□□□ -2
USO1YDL058W TY1B-DR4Q07793 1604 aa2.53□□□□□ -2
USO1YDL058W NOP58Q12499 511 aaKnown RBP2.53□□□□□ -2
USO1YDL058W YNR021WP53723 404 aaKnown RBP2.53□□□□□ -2.01
USO1YDL058W SNU71P53207 620 aaKnown RBP2.52□□□□□ -2.01
USO1YDL058W HPC2Q01448 625 aa2.52□□□□□ -2.01
USO1YDL058W ISW2Q08773 1120 aa2.52□□□□□ -2.01
USO1YDL058W SPT21P35209 758 aa2.52□□□□□ -2.01
USO1YDL058W HOS4P40480 1083 aa2.51□□□□□ -2.01
USO1YDL058W COG8Q04632 607 aa2.51□□□□□ -2.01
USO1YDL058W PSH1Q12161 406 aa2.51□□□□□ -2.01
USO1YDL058W TRZ1P36159 838 aaPredicted RBP2.51□□□□□ -2.01
USO1YDL058W SPB4P25808 606 aaPredicted RBP2.51□□□□□ -2.01
USO1YDL058W SMY2P32909 740 aaKnown RBP2.51□□□□□ -2.01
USO1YDL058W ENT3P47160 408 aa2.51□□□□□ -2.01
USO1YDL058W PRI1P10363 409 aa2.5□□□□□ -2.01
USO1YDL058W UTP14Q04500 899 aaKnown RBP2.5□□□□□ -2.01
USO1YDL058W SWR1Q05471 1514 aa2.5□□□□□ -2.01
USO1YDL058W RRP14P36080 434 aaKnown RBP2.5□□□□□ -2.01
USO1YDL058W CBF5P33322 483 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
USO1YDL058W SWD1P39706 426 aa2.5□□□□□ -2.01
USO1YDL058W YTA6P40328 754 aa2.5□□□□□ -2.01
USO1YDL058W RRN3P36070 627 aa2.49□□□□□ -2.01
USO1YDL058W KOG1P38873 1557 aa2.49□□□□□ -2.01
USO1YDL058W SEC20P28791 383 aa2.49□□□□□ -2.01
USO1YDL058W ESC2Q06340 456 aa2.49□□□□□ -2.01
USO1YDL058W INO80P53115 1489 aa2.49□□□□□ -2.01
USO1YDL058W HEM3P28789 327 aa2.48□□□□□ -2.01
USO1YDL058W YLH47Q06493 454 aa2.48□□□□□ -2.01
USO1YDL058W YTA7P40340 1379 aa2.48□□□□□ -2.01
USO1YDL058W SPT5P27692 1063 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms