RNA–Protein interactions for RNA: YIL126W

STH1, Transcript of ATPase component of the RSC chromatin remodeling complex, yeast

Gene STH1, Length 4,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STH1	YIL126W	DRS1	P32892	752 aa	Known RBP	4.14	□□□□□ -1.75
STH1	YIL126W	MTC1	P47018	478 aa	Known RBP	4.09	□□□□□ -1.75
STH1	YIL126W	MON2	P48563	1636 aa	Predicted RBP	3.79	□□□□□ -1.8
STH1	YIL126W	BFR2	Q06631	534 aa	Known RBP	3.72	□□□□□ -1.81
STH1	YIL126W	RQC2	Q12532	1038 aa	Known RBP	3.57	□□□□□ -1.84
STH1	YIL126W	INO80	P53115	1489 aa		3.57	□□□□□ -1.84
STH1	YIL126W	RSE1	Q04693	1361 aa	Known RBP	3.52	□□□□□ -1.85
STH1	YIL126W	PTP3	P40048	928 aa		3.52	□□□□□ -1.85
STH1	YIL126W	KOG1	P38873	1557 aa		3.51	□□□□□ -1.85
STH1	YIL126W	DMA1	P38823	416 aa		3.46	□□□□□ -1.85
STH1	YIL126W	DIP2	Q12220	943 aa	Predicted RBP	3.45	□□□□□ -1.86
STH1	YIL126W	FAP1	P53971	965 aa		3.45	□□□□□ -1.86
STH1	YIL126W	SWR1	Q05471	1514 aa		3.43	□□□□□ -1.86
STH1	YIL126W	DNA2	P38859	1522 aa		3.43	□□□□□ -1.86
STH1	YIL126W	MIF2	P35201	549 aa		3.39	□□□□□ -1.87
STH1	YIL126W	TY1B-DR4	Q07793	1604 aa		3.39	□□□□□ -1.87
STH1	YIL126W	TCB3	Q03640	1545 aa	Known RBP	3.38	□□□□□ -1.87
STH1	YIL126W	AVT3	P36062	692 aa		3.38	□□□□□ -1.87
STH1	YIL126W	ISW2	Q08773	1120 aa		3.37	□□□□□ -1.87
STH1	YIL126W	PRI1	P10363	409 aa		3.33	□□□□□ -1.88
STH1	YIL126W	SPA2	P23201	1466 aa	Known RBP	3.31	□□□□□ -1.88
STH1	YIL126W	SCT1	P32784	759 aa		3.31	□□□□□ -1.88
STH1	YIL126W	AAD16	Q02895	342 aa		3.3	□□□□□ -1.88
STH1	YIL126W	RPG1	P38249	964 aa	Known RBP	3.3	□□□□□ -1.88
STH1	YIL126W	ABP1	P15891	592 aa	Known RBP	3.27	□□□□□ -1.89
STH1	YIL126W	THO2	P53552	1597 aa	Known RBP	3.26	□□□□□ -1.89
STH1	YIL126W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	3.25	□□□□□ -1.89	not detected
STH1	YIL126W	YTA7	P40340	1379 aa		3.24	□□□□□ -1.89
STH1	YIL126W	URN1	Q06525	465 aa	Known RBP	3.24	□□□□□ -1.89
STH1	YIL126W	YAH1	Q12184	172 aa	Known RBP	3.24	□□□□□ -1.89
STH1	YIL126W	PRY3	P47033	881 aa		3.22	□□□□□ -1.89
STH1	YIL126W	TFA1	P36100	482 aa		3.2	□□□□□ -1.9
STH1	YIL126W	NAP1	P25293	417 aa	Known RBP	3.19	□□□□□ -1.9
STH1	YIL126W	RPL17A	P05740	184 aa	Known RBP	3.17	□□□□□ -1.9
STH1	YIL126W	RPL17B	P46990	184 aa	Known RBP	3.17	□□□□□ -1.9
STH1	YIL126W	REB1	P21538	810 aa		3.16	□□□□□ -1.9
STH1	YIL126W	TSR3	Q12094	313 aa	Known RBP	3.15	□□□□□ -1.91
STH1	YIL126W	REV3	P14284	1504 aa		3.14	□□□□□ -1.91
STH1	YIL126W	TAF7	Q05021	590 aa		3.14	□□□□□ -1.91
STH1	YIL126W	PEP1	P32319	1579 aa		3.13	□□□□□ -1.91
STH1	YIL126W	HSL1	P34244	1518 aa		3.12	□□□□□ -1.91
STH1	YIL126W	SSK2	P53599	1579 aa		3.12	□□□□□ -1.91
STH1	YIL126W	MDS3	P53094	1487 aa		3.11	□□□□□ -1.91
STH1	YIL126W	YFR006W	P43590	535 aa		3.11	□□□□□ -1.91
STH1	YIL126W	BUD4	P47136	1447 aa		3.1	□□□□□ -1.91
STH1	YIL126W	SAS10	Q12136	610 aa	Predicted RBP	3.1	□□□□□ -1.91
STH1	YIL126W	SPT6	P23615	1451 aa	Known RBP	3.1	□□□□□ -1.91
STH1	YIL126W	RTT106	P40161	455 aa		3.09	□□□□□ -1.91
STH1	YIL126W	UBP1	P25037	809 aa		3.09	□□□□□ -1.92
STH1	YIL126W	CAB3	P36076	571 aa		3.09	□□□□□ -1.92
STH1	YIL126W	YJL181W	P46987	611 aa		3.08	□□□□□ -1.92
STH1	YIL126W	LEU3	P08638	886 aa		3.08	□□□□□ -1.92
STH1	YIL126W	DMA2	P53924	522 aa		3.07	□□□□□ -1.92
STH1	YIL126W	HAA1	Q12753	694 aa	Known RBP	3.07	□□□□□ -1.92
STH1	YIL126W	MYO2	P19524	1574 aa	Known RBP	3.07	□□□□□ -1.92
STH1	YIL126W	MRPL32	P25348	183 aa		3.06	□□□□□ -1.92
STH1	YIL126W	NOP2	P40991	618 aa	Known RBP	3.06	□□□□□ -1.92
STH1	YIL126W	BPT1	P14772	1559 aa		3.05	□□□□□ -1.92
STH1	YIL126W	SPT21	P35209	758 aa		3.03	□□□□□ -1.92
STH1	YIL126W	HIR3	P47171	1648 aa		3.03	□□□□□ -1.92
STH1	YIL126W	ESC1	Q03661	1658 aa	Known RBP	3.02	□□□□□ -1.93
STH1	YIL126W	DNF1	P32660	1571 aa		3.02	□□□□□ -1.93
STH1	YIL126W	RRT14	P40470	206 aa		3.02	□□□□□ -1.93
STH1	YIL126W	LTE1	P07866	1435 aa		3.02	□□□□□ -1.93
STH1	YIL126W	ECM5	Q03214	1411 aa		3.02	□□□□□ -1.93
STH1	YIL126W	YCF1	P39109	1515 aa	Known RBP	3.01	□□□□□ -1.93
STH1	YIL126W	ENP1	P38333	483 aa	Known RBP	3.01	□□□□□ -1.93
STH1	YIL126W	YCK3	P39962	524 aa		3.01	□□□□□ -1.93
STH1	YIL126W	SGS1	P35187	1447 aa		3.01	□□□□□ -1.93
STH1	YIL126W	MET5	P47169	1442 aa		3.01	□□□□□ -1.93
STH1	YIL126W	ATG2	P53855	1592 aa		3	□□□□□ -1.93
STH1	YIL126W	EBP2	P36049	427 aa	Known RBP	3	□□□□□ -1.93
STH1	YIL126W	PAF1	P38351	445 aa		3	□□□□□ -1.93
STH1	YIL126W	YMR196W	Q04336	1088 aa		2.99	□□□□□ -1.93
STH1	YIL126W	YIL055C	P40523	627 aa	Known RBP	2.99	□□□□□ -1.93
STH1	YIL126W	RIM101	P33400	625 aa		2.98	□□□□□ -1.93
STH1	YIL126W	IRC20	Q06554	1556 aa		2.98	□□□□□ -1.93
STH1	YIL126W	SIN3	P22579	1536 aa		2.98	□□□□□ -1.93
STH1	YIL126W	RPA190	P10964	1664 aa	Known RBP	2.97	□□□□□ -1.93
STH1	YIL126W	BNR1	P40450	1375 aa		2.97	□□□□□ -1.93
STH1	YIL126W	UGA2	P38067	497 aa		2.96	□□□□□ -1.94
STH1	YIL126W	MRX12	P47084	519 aa		2.96	□□□□□ -1.94
STH1	YIL126W	AIM44	Q99299	758 aa		2.96	□□□□□ -1.94
STH1	YIL126W	DRS2	P39524	1355 aa		2.96	□□□□□ -1.94
STH1	YIL126W	TAF2	P23255	1407 aa		2.95	□□□□□ -1.94
STH1	YIL126W	CDC25	P04821	1589 aa		2.95	□□□□□ -1.94
STH1	YIL126W	MNN4	P36044	1178 aa		2.95	□□□□□ -1.94
STH1	YIL126W	LEO1	P38439	464 aa		2.95	□□□□□ -1.94
STH1	YIL126W	YKR023W	P36119	530 aa	Known RBP	2.94	□□□□□ -1.94
STH1	YIL126W	SIS2	P36024	562 aa		2.93	□□□□□ -1.94
STH1	YIL126W	RKR1	Q04781	1562 aa		2.93	□□□□□ -1.94
STH1	YIL126W	RPS9B	P05755	195 aa	Known RBP	2.93	□□□□□ -1.94
STH1	YIL126W	PRP40	P33203	583 aa	Known RBP	2.93	□□□□□ -1.94
STH1	YIL126W	ESP1	Q03018	1630 aa		2.93	□□□□□ -1.94
STH1	YIL126W	BNI1	P41832	1953 aa		2.92	□□□□□ -1.94
STH1	YIL126W	DCD1	P06773	312 aa		2.92	□□□□□ -1.94
STH1	YIL126W	GEA2	P39993	1459 aa	Known RBP	2.92	□□□□□ -1.94
STH1	YIL126W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	2.9	□□□□□ -1.94	not detected
STH1	YIL126W	CDC27	P38042	758 aa		2.9	□□□□□ -1.95
STH1	YIL126W	TFC8	Q12308	588 aa		2.9	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms