Protein–RNA interactions for Protein: P43609

RSC8, Chromatin structure-remodeling complex protein RSC8, yeastyeast

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC8P43609 DNF1YER166W 4716 nt2.44□□□□□ -2.02
RSC8P43609 MGM1YOR211C 2646 nt2.44□□□□□ -2.02
RSC8P43609 YDR286CYDR286C 345 nt2.43□□□□□ -2.02
RSC8P43609 UPS1YLR193C 528 nt2.43□□□□□ -2.02
RSC8P43609 YOL155W-AYOL155W-A 135 nt2.43□□□□□ -2.02
RSC8P43609 YBR064WYBR064W 429 nt2.43□□□□□ -2.02
RSC8P43609 EFR3YMR212C 2349 nt2.43□□□□□ -2.02
RSC8P43609 BNI1YNL271C 5862 nt2.43□□□□□ -2.02
RSC8P43609 SAP190YKR028W 3102 nt2.43□□□□□ -2.02
RSC8P43609 TRL1YJL087C 2484 nt2.43□□□□□ -2.02
RSC8P43609 CDC60YPL160W 3273 nt2.42□□□□□ -2.02
RSC8P43609 YDR426CYDR426C 378 nt2.42□□□□□ -2.02
RSC8P43609 VPS34YLR240W 2628 nt2.42□□□□□ -2.02
RSC8P43609 VPS13YLL040C 9435 nt2.41□□□□□ -2.02
RSC8P43609 STB4YMR019W 2850 nt2.41□□□□□ -2.02
RSC8P43609 VMR1YHL035C 4779 nt2.41□□□□□ -2.02
RSC8P43609 IRC8YJL051W 2469 nt2.41□□□□□ -2.02
RSC8P43609 NOP53YPL146C 1368 nt2.41□□□□□ -2.02
RSC8P43609 snR60snR60 104 nt2.41□□□□□ -2.02
RSC8P43609 BRP1YGL007W 378 nt2.41□□□□□ -2.02
RSC8P43609 YGR250CYGR250C 2346 nt2.41□□□□□ -2.02
RSC8P43609 GRR1YJR090C 3456 nt2.41□□□□□ -2.02
RSC8P43609 SET2YJL168C 2202 nt2.4□□□□□ -2.03
RSC8P43609 RTT101YJL047C 2529 nt2.4□□□□□ -2.03
RSC8P43609 EMP24YGL200C 612 nt2.39□□□□□ -2.03
RSC8P43609 YLR146W-AYLR146W-A 189 nt2.39□□□□□ -2.03
RSC8P43609 SLM1YIL105C 2061 nt2.38□□□□□ -2.03
RSC8P43609 MVP1YMR004W 1536 nt2.38□□□□□ -2.03
RSC8P43609 YGL007C-AYGL007C-A 87 nt2.38□□□□□ -2.03
RSC8P43609 TRX1YLR043C 312 nt2.38□□□□□ -2.03
RSC8P43609 YPR002C-AYPR002C-A 198 nt2.38□□□□□ -2.03
RSC8P43609 COS111YBR203W 2775 nt2.38□□□□□ -2.03
RSC8P43609 SCW11YGL028C 1629 nt2.38□□□□□ -2.03
RSC8P43609 PXA2YKL188C 2562 nt2.37□□□□□ -2.03
RSC8P43609 CFT2YLR115W 2580 nt2.37□□□□□ -2.03
RSC8P43609 RPL42BYHR141C 321 nt2.37□□□□□ -2.03
RSC8P43609 YMR141W-AYMR141W-A 225 nt2.37□□□□□ -2.03
RSC8P43609 YMR307C-AYMR307C-A 195 nt2.37□□□□□ -2.03
RSC8P43609 RPL42AYNL162W 321 nt2.37□□□□□ -2.03
RSC8P43609 YBL083CYBL083C 426 nt2.37□□□□□ -2.03
RSC8P43609 ZRG8YER033C 3231 nt2.36□□□□□ -2.03
RSC8P43609 snR55snR55 98 nt2.36□□□□□ -2.03
RSC8P43609 CYB5YNL111C 363 nt2.36□□□□□ -2.03
RSC8P43609 YNL114CYNL114C 372 nt2.36□□□□□ -2.03
RSC8P43609 PET309YLR067C 2898 nt2.36□□□□□ -2.03
RSC8P43609 IST2YBR086C 2841 nt2.36□□□□□ -2.03
RSC8P43609 YDR341CYDR341C 1824 nt2.35□□□□□ -2.03
RSC8P43609 RTT107YHR154W 3213 nt2.35□□□□□ -2.03
RSC8P43609 YCR102W-AYCR102W-A 198 nt2.35□□□□□ -2.03
RSC8P43609 APQ12YIL040W 417 nt2.35□□□□□ -2.03
RSC8P43609 YKR075W-AYKR075W-A 270 nt2.35□□□□□ -2.03
RSC8P43609 YOR394C-AYOR394C-A 168 nt2.35□□□□□ -2.03
RSC8P43609 YCK3YER123W 1575 nt2.35□□□□□ -2.03
RSC8P43609 SWI6YLR182W 2412 nt2.34□□□□□ -2.03
RSC8P43609 SEC16YPL085W 6588 nt2.34□□□□□ -2.04
RSC8P43609 NAM7YMR080C 2916 nt2.33□□□□□ -2.04
RSC8P43609 GYP5YPL249C 2685 nt2.33□□□□□ -2.04
RSC8P43609 YHR071C-AYHR071C-A 321 nt2.33□□□□□ -2.04
RSC8P43609 YNL028WYNL028W 318 nt2.33□□□□□ -2.04
RSC8P43609 YNL198CYNL198C 303 nt2.33□□□□□ -2.04
RSC8P43609 UBP2YOR124C 3819 nt2.33□□□□□ -2.04
RSC8P43609 IES4YOR189W 351 nt2.33□□□□□ -2.04
RSC8P43609 RPH1YER169W 2391 nt2.33□□□□□ -2.04
RSC8P43609 YLL032CYLL032C 2478 nt2.33□□□□□ -2.04
RSC8P43609 UTP22YGR090W 3714 nt2.33□□□□□ -2.04
RSC8P43609 LCD1YDR499W 2244 nt2.33□□□□□ -2.04
RSC8P43609 MUK1YPL070W 1839 nt2.33□□□□□ -2.04
RSC8P43609 IRR1YIL026C 3453 nt2.32□□□□□ -2.04
RSC8P43609 VPS8YAL002W 3825 nt2.32□□□□□ -2.04
RSC8P43609 YMR172C-AYMR172C-A 384 nt2.32□□□□□ -2.04
RSC8P43609 INP2YMR163C 2118 nt2.32□□□□□ -2.04
RSC8P43609 MDM20YOL076W 2391 nt2.31□□□□□ -2.04
RSC8P43609 SYH1YPL105C 2550 nt2.31□□□□□ -2.04
RSC8P43609 PLC1YPL268W 2610 nt2.31□□□□□ -2.04
RSC8P43609 RPL37BYDR500C 267 nt2.31□□□□□ -2.04
RSC8P43609 CSE2YNR010W 450 nt2.31□□□□□ -2.04
RSC8P43609 NPR2YEL062W 1848 nt2.31□□□□□ -2.04
RSC8P43609 YCR043CYCR043C 384 nt2.3□□□□□ -2.04
RSC8P43609 YGL052WYGL052W 306 nt2.3□□□□□ -2.04
RSC8P43609 PAM16YJL104W 450 nt2.3□□□□□ -2.04
RSC8P43609 YJL197C-AYJL197C-A 282 nt2.3□□□□□ -2.04
RSC8P43609 YMR230W-AYMR230W-A 189 nt2.3□□□□□ -2.04
RSC8P43609 SAP185YJL098W 3177 nt2.3□□□□□ -2.04
RSC8P43609 SWI5YDR146C 2130 nt2.29□□□□□ -2.04
RSC8P43609 SSS1YDR086C 243 nt2.29□□□□□ -2.04
RSC8P43609 GPG1YGL121C 381 nt2.29□□□□□ -2.04
RSC8P43609 YLR294CYLR294C 330 nt2.29□□□□□ -2.04
RSC8P43609 HER1YOR227W 3741 nt2.29□□□□□ -2.04
RSC8P43609 VIK1YPL253C 1944 nt2.29□□□□□ -2.04
RSC8P43609 PAU2YEL049W 363 nt2.28□□□□□ -2.04
RSC8P43609 YJL135WYJL135W 318 nt2.28□□□□□ -2.04
RSC8P43609 RPB10YOR210W 213 nt2.28□□□□□ -2.04
RSC8P43609 RFX1YLR176C 2436 nt2.28□□□□□ -2.04
RSC8P43609 PFD1YJL179W 330 nt2.27□□□□□ -2.05
RSC8P43609 YLR120W-AYLR120W-A 102 nt2.27□□□□□ -2.05
RSC8P43609 TFC8YPL007C 1767 nt2.27□□□□□ -2.05
RSC8P43609 SLY1YDR189W 2001 nt2.27□□□□□ -2.05
RSC8P43609 CAT2YML042W 2013 nt2.26□□□□□ -2.05
RSC8P43609 ISD11YER048W-A 285 nt2.26□□□□□ -2.05
RSC8P43609 YHR073W-AYHR073W-A 177 nt2.26□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 64.2 ms