RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeastyeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APQ12YIL040W MTC1P47018 478 aaKnown RBP11.41□□□□□ -0.58
APQ12YIL040W FAP1P53971 965 aa11.14□□□□□ -0.63
APQ12YIL040W PRY3P47033 881 aa10.47□□□□□ -0.73
APQ12YIL040W DRS1P32892 752 aaKnown RBP10.04□□□□□ -0.8
APQ12YIL040W AAD16Q02895 342 aa10.04□□□□□ -0.8
APQ12YIL040W PRI1P10363 409 aa9.98□□□□□ -0.81
APQ12YIL040W HAA1Q12753 694 aaKnown RBP9.74□□□□□ -0.85
APQ12YIL040W YCK3P39962 524 aa9.7□□□□□ -0.86
APQ12YIL040W ISW2Q08773 1120 aa9.66□□□□□ -0.86
APQ12YIL040W RPG1P38249 964 aaKnown RBP9.56□□□□□ -0.88
APQ12YIL040W TSR3Q12094 313 aaKnown RBP9.44□□□□□ -0.9
APQ12YIL040W MRPL32P25348 183 aa9.11□□□□□ -0.95
APQ12YIL040W DIP2Q12220 943 aaPredicted RBP9.03□□□□□ -0.96
APQ12YIL040W RSE1Q04693 1361 aaKnown RBP8.93□□□□□ -0.98
APQ12YIL040W YGL015CP33199 130 aa8.89□□□□□ -0.99
APQ12YIL040W REB1P21538 810 aa8.76□□□□□ -1.01
APQ12YIL040W RPL17AP05740 184 aaKnown RBP8.69□□□□□ -1.02
APQ12YIL040W RPL17BP46990 184 aaKnown RBP8.69□□□□□ -1.02
APQ12YIL040W BUD31P25337 157 aaPredicted RBP8.54□□□□□ -1.04
APQ12YIL040W AVT3P36062 692 aa8.45□□□□□ -1.06
APQ12YIL040W CDC27P38042 758 aa8.45□□□□□ -1.06
APQ12YIL040W UBP10P53874 792 aaPredicted RBP8.32□□□□□ -1.08
APQ12YIL040W MAP2P38174 421 aaKnown RBP8.3□□□□□ -1.08
APQ12YIL040W YKR023WP36119 530 aaKnown RBP8.26□□□□□ -1.09
APQ12YIL040W SPT21P35209 758 aa8.18□□□□□ -1.1
APQ12YIL040W HOP09932 586 aa8.15□□□□□ -1.1
APQ12YIL040W DCD1P06773 312 aa8.13□□□□□ -1.11
APQ12YIL040W TFC8Q12308 588 aa8.11□□□□□ -1.11
APQ12YIL040W TIF4632P39936 914 aaKnown RBP8.05□□□□□ -1.12
APQ12YIL040W SCY1P53009 804 aa8.04□□□□□ -1.12
APQ12YIL040W BFR2Q06631 534 aaKnown RBP8.04□□□□□ -1.12
APQ12YIL040W SIS1P25294 352 aaKnown RBP8.02□□□□□ -1.13
APQ12YIL040W UBP9P39967 754 aa7.99□□□□□ -1.13
APQ12YIL040W SLX5P32828 619 aaKnown RBP7.97□□□□□ -1.13
APQ12YIL040W TGL3P40308 642 aa7.96□□□□□ -1.14
APQ12YIL040W BCH2P36122 765 aa7.82□□□□□ -1.16
APQ12YIL040W RIM101P33400 625 aa7.76□□□□□ -1.17
APQ12YIL040W EPS1P40557 701 aa7.6□□□□□ -1.19
APQ12YIL040W BDF1P35817 686 aa7.57□□□□□ -1.2
APQ12YIL040W YBL029C-AQ3E756 94 aa7.56□□□□□ -1.2
APQ12YIL040W YOR238WQ08634 303 aa7.53□□□□□ -1.2
APQ12YIL040W PTP3P40048 928 aa7.51□□□□□ -1.21
APQ12YIL040W MST1P07236 462 aa7.49□□□□□ -1.21
APQ12YIL040W YIL055CP40523 627 aaKnown RBP7.48□□□□□ -1.21
APQ12YIL040W OXP1P28273 1286 aa7.47□□□□□ -1.21
APQ12YIL040W VNX1P42839 908 aa7.42□□□□□ -1.22
APQ12YIL040W SPP1Q03012 353 aa7.41□□□□□ -1.22
APQ12YIL040W BBC1P47068 1157 aa7.4□□□□□ -1.22
APQ12YIL040W WSC3Q12215 556 aa7.39□□□□□ -1.23
APQ12YIL040W YAP5P40574 245 aa7.38□□□□□ -1.23
APQ12YIL040W NSR1P27476 414 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
APQ12YIL040W YJL171CP46992 396 aa7.32□□□□□ -1.24
APQ12YIL040W RSM7P47150 247 aa7.31□□□□□ -1.24
APQ12YIL040W AI2P03876 854 aa7.3□□□□□ -1.24
APQ12YIL040W GTT3P39996 337 aa7.29□□□□□ -1.24
APQ12YIL040W YAH1Q12184 172 aaKnown RBP7.27□□□□□ -1.25
APQ12YIL040W TIF11P38912 153 aaKnown RBP7.26□□□□□ -1.25
APQ12YIL040W AIR2Q12476 344 aaKnown RBP7.25□□□□□ -1.25
APQ12YIL040W FKH1P40466 484 aa7.21□□□□□ -1.26
APQ12YIL040W LDB19Q12502 818 aa7.17□□□□□ -1.26
APQ12YIL040W ULI1P43604 169 aa7.15□□□□□ -1.26
APQ12YIL040W PIB1Q06651 286 aa7.14□□□□□ -1.27
APQ12YIL040W BMT6Q12291 365 aa7.13□□□□□ -1.27
APQ12YIL040W IOC2Q12072 812 aa7.07□□□□□ -1.28
APQ12YIL040W YLR271WQ06152 274 aa7.03□□□□□ -1.28
APQ12YIL040W MRM1P25270 412 aa7.02□□□□□ -1.29
APQ12YIL040W EAP1P36041 632 aaKnown RBP7.02□□□□□ -1.29
APQ12YIL040W MSB4Q12317 492 aa7.02□□□□□ -1.29
APQ12YIL040W PSD2P53037 1138 aaKnown RBP6.99□□□□□ -1.29
APQ12YIL040W RTG1P32607 177 aa6.98□□□□□ -1.29
APQ12YIL040W SET4P42948 560 aa6.97□□□□□ -1.29
APQ12YIL040W YOL036WQ08206 761 aa6.95□□□□□ -1.3
APQ12YIL040W NCR1Q12200 1170 aa6.95□□□□□ -1.3
APQ12YIL040W TRP5P00931 707 aaKnown RBP6.93□□□□□ -1.3
APQ12YIL040W TFA1P36100 482 aa6.9□□□□□ -1.3
APQ12YIL040W YMR1P47147 688 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
APQ12YIL040W YNL035CP53962 389 aaKnown RBP6.89□□□□□ -1.31
APQ12YIL040W TFG1P41895 735 aaPredicted RBP6.88□□□□□ -1.31
APQ12YIL040W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
APQ12YIL040W DBP1P24784 617 aaKnown RBP6.87□□□□□ -1.31
APQ12YIL040W SEC61P32915 480 aa6.87□□□□□ -1.31
APQ12YIL040W YFR006WP43590 535 aa6.87□□□□□ -1.31
APQ12YIL040W VMA1P17255 1071 aaKnown RBP6.83□□□□□ -1.32
APQ12YIL040W RTG3P38165 486 aa6.82□□□□□ -1.32
APQ12YIL040W VPS29P38759 282 aa6.81□□□□□ -1.32
APQ12YIL040W SSP1P38871 571 aa6.8□□□□□ -1.32
APQ12YIL040W SAP30P38429 201 aa6.79□□□□□ -1.32
APQ12YIL040W STS1P38637 319 aa6.77□□□□□ -1.33
APQ12YIL040W CST9Q06032 482 aa6.76□□□□□ -1.33
APQ12YIL040W SAM3Q08986 587 aa6.76□□□□□ -1.33
APQ12YIL040W BCK2P33306 851 aa6.75□□□□□ -1.33
APQ12YIL040W JIP4Q03361 876 aa6.73□□□□□ -1.33
APQ12YIL040W CHL1P22516 861 aaPredicted RBP6.71□□□□□ -1.34
APQ12YIL040W MGA2P40578 1113 aa6.71□□□□□ -1.34
APQ12YIL040W YDL129WQ07555 291 aa6.71□□□□□ -1.34
APQ12YIL040W GYP5Q12344 894 aa6.71□□□□□ -1.34
APQ12YIL040W ABP1P15891 592 aaKnown RBP6.7□□□□□ -1.34
APQ12YIL040W DAN4P47179 1161 aa6.7□□□□□ -1.34
APQ12YIL040W HTA1P04911 132 aaKnown RBP6.69□□□□□ -1.34
APQ12YIL040W HTA2P04912 132 aa6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms