RNA–Protein interactions for RNA: YLR043C

TRX1, Transcript of Cytoplasmic thioredoxin isoenzyme, yeastyeast

Gene TRX1, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRX1YLR043C MTC1P47018 478 aaKnown RBP8.01□□□□□ -1.13
TRX1YLR043C DRS1P32892 752 aaKnown RBP7.66□□□□□ -1.18
TRX1YLR043C FAP1P53971 965 aa7.18□□□□□ -1.26
TRX1YLR043C PRY3P47033 881 aa6.73□□□□□ -1.33
TRX1YLR043C PRI1P10363 409 aa6.71□□□□□ -1.34
TRX1YLR043C DIP2Q12220 943 aaPredicted RBP6.68□□□□□ -1.34
TRX1YLR043C AAD16Q02895 342 aa6.67□□□□□ -1.34
TRX1YLR043C ISW2Q08773 1120 aa6.63□□□□□ -1.35
TRX1YLR043C RPG1P38249 964 aaKnown RBP6.61□□□□□ -1.35
TRX1YLR043C AVT3P36062 692 aa6.43□□□□□ -1.38
TRX1YLR043C BFR2Q06631 534 aaKnown RBP6.42□□□□□ -1.38
TRX1YLR043C TSR3Q12094 313 aaKnown RBP6.41□□□□□ -1.38
TRX1YLR043C RSE1Q04693 1361 aaKnown RBP6.4□□□□□ -1.39
TRX1YLR043C YCK3P39962 524 aa6.32□□□□□ -1.4
TRX1YLR043C HAA1Q12753 694 aaKnown RBP6.26□□□□□ -1.41
TRX1YLR043C RPL17AP05740 184 aaKnown RBP6.22□□□□□ -1.41
TRX1YLR043C RPL17BP46990 184 aaKnown RBP6.22□□□□□ -1.41
TRX1YLR043C REB1P21538 810 aa6.18□□□□□ -1.42
TRX1YLR043C MRPL32P25348 183 aa6.12□□□□□ -1.43
TRX1YLR043C SPT21P35209 758 aa5.89□□□□□ -1.47
TRX1YLR043C YKR023WP36119 530 aaKnown RBP5.85□□□□□ -1.47
TRX1YLR043C CDC27P38042 758 aa5.84□□□□□ -1.47
TRX1YLR043C YGL015CP33199 130 aa5.83□□□□□ -1.48
TRX1YLR043C HOP09932 586 aa5.77□□□□□ -1.49
TRX1YLR043C DCD1P06773 312 aa5.76□□□□□ -1.49
TRX1YLR043C RIM101P33400 625 aa5.74□□□□□ -1.49
TRX1YLR043C TFC8Q12308 588 aa5.71□□□□□ -1.5
TRX1YLR043C TFA1P36100 482 aa5.69□□□□□ -1.5
TRX1YLR043C MAP2P38174 421 aaKnown RBP5.64□□□□□ -1.51
TRX1YLR043C OXP1P28273 1286 aa5.58□□□□□ -1.52
TRX1YLR043C SCY1P53009 804 aa5.57□□□□□ -1.52
TRX1YLR043C UBP10P53874 792 aaPredicted RBP5.57□□□□□ -1.52
TRX1YLR043C BCH2P36122 765 aa5.56□□□□□ -1.52
TRX1YLR043C YIL055CP40523 627 aaKnown RBP5.52□□□□□ -1.53
TRX1YLR043C PTP3P40048 928 aa5.5□□□□□ -1.53
TRX1YLR043C YAH1Q12184 172 aaKnown RBP5.48□□□□□ -1.53
TRX1YLR043C SLX5P32828 619 aaKnown RBP5.45□□□□□ -1.54
TRX1YLR043C EPS1P40557 701 aa5.41□□□□□ -1.54
TRX1YLR043C RSM7P47150 247 aa5.41□□□□□ -1.54
TRX1YLR043C BDF1P35817 686 aa5.39□□□□□ -1.55
TRX1YLR043C TIF4632P39936 914 aaKnown RBP5.38□□□□□ -1.55
TRX1YLR043C TGL3P40308 642 aa5.36□□□□□ -1.55
TRX1YLR043C AI2P03876 854 aa5.35□□□□□ -1.55
TRX1YLR043C YLR271WQ06152 274 aa5.34□□□□□ -1.55
TRX1YLR043C BBC1P47068 1157 aa5.33□□□□□ -1.56
TRX1YLR043C SSP1P38871 571 aa5.29□□□□□ -1.56
TRX1YLR043C BUD31P25337 157 aaPredicted RBP5.25□□□□□ -1.57
TRX1YLR043C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
TRX1YLR043C PSD2P53037 1138 aaKnown RBP5.2□□□□□ -1.58
TRX1YLR043C MRM1P25270 412 aa5.18□□□□□ -1.58
TRX1YLR043C CST9Q06032 482 aa5.17□□□□□ -1.58
TRX1YLR043C UBP9P39967 754 aa5.16□□□□□ -1.58
TRX1YLR043C YOR238WQ08634 303 aa5.15□□□□□ -1.59
TRX1YLR043C MGA2P40578 1113 aa5.14□□□□□ -1.59
TRX1YLR043C YAP5P40574 245 aa5.12□□□□□ -1.59
TRX1YLR043C MST1P07236 462 aa5.11□□□□□ -1.59
TRX1YLR043C PIB1Q06651 286 aa5.11□□□□□ -1.59
TRX1YLR043C YBL029C-AQ3E756 94 aa5.08□□□□□ -1.6
TRX1YLR043C SIS1P25294 352 aaKnown RBP5.07□□□□□ -1.6
TRX1YLR043C NSR1P27476 414 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6 RIP-Chip
TRX1YLR043C WSC3Q12215 556 aa5.06□□□□□ -1.6
TRX1YLR043C RTG3P38165 486 aa5.05□□□□□ -1.6
TRX1YLR043C RCR1P38212 213 aa5.04□□□□□ -1.6
TRX1YLR043C VPS29P38759 282 aa5.03□□□□□ -1.6
TRX1YLR043C GTT3P39996 337 aa5.03□□□□□ -1.6
TRX1YLR043C YFR006WP43590 535 aa5.03□□□□□ -1.6
TRX1YLR043C VNX1P42839 908 aa5.02□□□□□ -1.61
TRX1YLR043C DBP1P24784 617 aaKnown RBP5.01□□□□□ -1.61
TRX1YLR043C YMR1P47147 688 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
TRX1YLR043C SPP1Q03012 353 aa5□□□□□ -1.61
TRX1YLR043C STS1P38637 319 aa4.97□□□□□ -1.61
TRX1YLR043C TIF11P38912 153 aaKnown RBP4.93□□□□□ -1.62
TRX1YLR043C SET4P42948 560 aa4.92□□□□□ -1.62
TRX1YLR043C VMA1P17255 1071 aaKnown RBP4.91□□□□□ -1.62
TRX1YLR043C RAM2P29703 316 aa4.9□□□□□ -1.63
TRX1YLR043C ULI1P43604 169 aa4.9□□□□□ -1.63
TRX1YLR043C YOL036WQ08206 761 aa4.88□□□□□ -1.63
TRX1YLR043C MIF2P35201 549 aa4.86□□□□□ -1.63
TRX1YLR043C IOC2Q12072 812 aa4.86□□□□□ -1.63
TRX1YLR043C LDB19Q12502 818 aa4.86□□□□□ -1.63
TRX1YLR043C TRP5P00931 707 aaKnown RBP4.85□□□□□ -1.63
TRX1YLR043C SAM3Q08986 587 aa4.84□□□□□ -1.63
TRX1YLR043C MSB4Q12317 492 aa4.84□□□□□ -1.63
TRX1YLR043C GYP5Q12344 894 aa4.84□□□□□ -1.63
TRX1YLR043C EAP1P36041 632 aaKnown RBP4.83□□□□□ -1.64
TRX1YLR043C DCW1P36091 449 aa4.83□□□□□ -1.64
TRX1YLR043C MAK11P20484 414 aaKnown RBP4.82□□□□□ -1.64
TRX1YLR043C AIR2Q12476 344 aaKnown RBP4.81□□□□□ -1.64
TRX1YLR043C RTG1P32607 177 aa4.8□□□□□ -1.64
TRX1YLR043C EDS1P38073 919 aa4.8□□□□□ -1.64
TRX1YLR043C YJL171CP46992 396 aa4.8□□□□□ -1.64
TRX1YLR043C COQ8P27697 501 aa4.79□□□□□ -1.64
TRX1YLR043C FKH1P40466 484 aa4.79□□□□□ -1.64
TRX1YLR043C NCR1Q12200 1170 aa4.78□□□□□ -1.64
TRX1YLR043C PTC3P34221 468 aaKnown RBP4.77□□□□□ -1.65
TRX1YLR043C GRE2Q12068 342 aaKnown RBP4.77□□□□□ -1.65
TRX1YLR043C HTA1P04911 132 aaKnown RBP4.76□□□□□ -1.65
TRX1YLR043C HTA2P04912 132 aa4.76□□□□□ -1.65
TRX1YLR043C ATH1P48016 1211 aa4.76□□□□□ -1.65
TRX1YLR043C YNL035CP53962 389 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms