RNA–Protein interactions for RNA: YHL035C

VMR1, Transcript of Vacuolar membrane protein, yeastyeast

Gene VMR1, Length 4,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMR1YHL035C DRS1P32892 752 aaKnown RBP5.58□□□□□ -1.52
VMR1YHL035C MTC1P47018 478 aaKnown RBP5.57□□□□□ -1.52
VMR1YHL035C BFR2Q06631 534 aaKnown RBP4.89□□□□□ -1.63
VMR1YHL035C TFA1P36100 482 aa4.83□□□□□ -1.64
VMR1YHL035C AVT3P36062 692 aa4.81□□□□□ -1.64
VMR1YHL035C DIP2Q12220 943 aaPredicted RBP4.75□□□□□ -1.65
VMR1YHL035C ISW2Q08773 1120 aa4.51□□□□□ -1.69
VMR1YHL035C RSE1Q04693 1361 aaKnown RBP4.51□□□□□ -1.69
VMR1YHL035C PRI1P10363 409 aa4.42□□□□□ -1.7
VMR1YHL035C RPG1P38249 964 aaKnown RBP4.35□□□□□ -1.71
VMR1YHL035C AAD16Q02895 342 aa4.3□□□□□ -1.72
VMR1YHL035C RQC2Q12532 1038 aaKnown RBP4.28□□□□□ -1.72
VMR1YHL035C RPL17AP05740 184 aaKnown RBP4.25□□□□□ -1.73
VMR1YHL035C RPL17BP46990 184 aaKnown RBP4.25□□□□□ -1.73
VMR1YHL035C FAP1P53971 965 aa4.24□□□□□ -1.73
VMR1YHL035C SPT21P35209 758 aa4.22□□□□□ -1.73
VMR1YHL035C RIM101P33400 625 aa4.21□□□□□ -1.73
VMR1YHL035C REB1P21538 810 aa4.19□□□□□ -1.74
VMR1YHL035C TSR3Q12094 313 aaKnown RBP4.06□□□□□ -1.76
VMR1YHL035C SSP1P38871 571 aa4.02□□□□□ -1.77
VMR1YHL035C YKR023WP36119 530 aaKnown RBP4.01□□□□□ -1.77
VMR1YHL035C MRPL32P25348 183 aa3.99□□□□□ -1.77
VMR1YHL035C OXP1P28273 1286 aa3.99□□□□□ -1.77
VMR1YHL035C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
VMR1YHL035C PRY3P47033 881 aa3.97□□□□□ -1.77
VMR1YHL035C HAA1Q12753 694 aaKnown RBP3.95□□□□□ -1.78
VMR1YHL035C TFC8Q12308 588 aa3.94□□□□□ -1.78
VMR1YHL035C RSM7P47150 247 aa3.91□□□□□ -1.78
VMR1YHL035C YIL055CP40523 627 aaKnown RBP3.91□□□□□ -1.78
VMR1YHL035C YLR271WQ06152 274 aa3.9□□□□□ -1.78
VMR1YHL035C MGA2P40578 1113 aa3.9□□□□□ -1.79
VMR1YHL035C PTP3P40048 928 aa3.89□□□□□ -1.79
VMR1YHL035C YCK3P39962 524 aa3.87□□□□□ -1.79
VMR1YHL035C PSD2P53037 1138 aaKnown RBP3.86□□□□□ -1.79
VMR1YHL035C SAS10Q12136 610 aaPredicted RBP3.86□□□□□ -1.79
VMR1YHL035C DMA1P38823 416 aa3.86□□□□□ -1.79
VMR1YHL035C UBP10P53874 792 aaPredicted RBP3.85□□□□□ -1.79
VMR1YHL035C CDC27P38042 758 aa3.84□□□□□ -1.79
VMR1YHL035C BBC1P47068 1157 aa3.82□□□□□ -1.8
VMR1YHL035C AI2P03876 854 aa3.81□□□□□ -1.8
VMR1YHL035C HOP09932 586 aa3.8□□□□□ -1.8
VMR1YHL035C NOP53Q12080 455 aaKnown RBP3.8□□□□□ -1.8
VMR1YHL035C YAH1Q12184 172 aaKnown RBP3.8□□□□□ -1.8
VMR1YHL035C LEO1P38439 464 aa3.79□□□□□ -1.8
VMR1YHL035C LEU3P08638 886 aa3.79□□□□□ -1.8
VMR1YHL035C BCH2P36122 765 aa3.78□□□□□ -1.8
VMR1YHL035C IFH1P39520 1085 aa3.78□□□□□ -1.81
VMR1YHL035C NSR1P27476 414 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
VMR1YHL035C YPR148CQ06523 435 aa3.77□□□□□ -1.81
VMR1YHL035C YGL015CP33199 130 aa3.76□□□□□ -1.81
VMR1YHL035C EPS1P40557 701 aa3.75□□□□□ -1.81
VMR1YHL035C CST9Q06032 482 aa3.74□□□□□ -1.81
VMR1YHL035C BDF1P35817 686 aa3.72□□□□□ -1.81
VMR1YHL035C MAK11P20484 414 aaKnown RBP3.71□□□□□ -1.82
VMR1YHL035C CKB1P43639 278 aa3.71□□□□□ -1.82
VMR1YHL035C RTG3P38165 486 aa3.71□□□□□ -1.82
VMR1YHL035C DCD1P06773 312 aa3.7□□□□□ -1.82
VMR1YHL035C RAM2P29703 316 aa3.69□□□□□ -1.82
VMR1YHL035C TAF7Q05021 590 aa3.68□□□□□ -1.82
VMR1YHL035C TGL3P40308 642 aa3.67□□□□□ -1.82
VMR1YHL035C SLX5P32828 619 aaKnown RBP3.66□□□□□ -1.82
VMR1YHL035C MAP2P38174 421 aaKnown RBP3.66□□□□□ -1.82
VMR1YHL035C SCY1P53009 804 aa3.66□□□□□ -1.82
VMR1YHL035C SET1P38827 1080 aaKnown RBP3.65□□□□□ -1.83
VMR1YHL035C MRM1P25270 412 aa3.64□□□□□ -1.83
VMR1YHL035C VPS29P38759 282 aa3.64□□□□□ -1.83
VMR1YHL035C YMR1P47147 688 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
VMR1YHL035C RPN1P38764 993 aaKnown RBP3.63□□□□□ -1.83
VMR1YHL035C TIF4632P39936 914 aaKnown RBP3.63□□□□□ -1.83
VMR1YHL035C MAK21Q12176 1025 aaKnown RBP3.62□□□□□ -1.83
VMR1YHL035C MST1P07236 462 aa3.62□□□□□ -1.83
VMR1YHL035C DSF2P38213 736 aa3.62□□□□□ -1.83
VMR1YHL035C ABP1P15891 592 aaKnown RBP3.59□□□□□ -1.83
VMR1YHL035C COQ8P27697 501 aa3.59□□□□□ -1.83
VMR1YHL035C YAP5P40574 245 aa3.59□□□□□ -1.83
VMR1YHL035C SAM3Q08986 587 aa3.58□□□□□ -1.84
VMR1YHL035C YNR021WP53723 404 aaKnown RBP3.57□□□□□ -1.84
VMR1YHL035C RCR1P38212 213 aa3.57□□□□□ -1.84
VMR1YHL035C AIM7Q12156 149 aa3.56□□□□□ -1.84
VMR1YHL035C REF2P42073 533 aaPredicted RBP3.56□□□□□ -1.84
VMR1YHL035C STS1P38637 319 aa3.55□□□□□ -1.84
VMR1YHL035C YOR238WQ08634 303 aa3.55□□□□□ -1.84
VMR1YHL035C VPS70P47161 811 aa3.54□□□□□ -1.84
VMR1YHL035C PBS2P08018 668 aa3.54□□□□□ -1.84
VMR1YHL035C COX6P00427 148 aa3.53□□□□□ -1.84
VMR1YHL035C PTC3P34221 468 aaKnown RBP3.53□□□□□ -1.84
VMR1YHL035C EDS1P38073 919 aa3.53□□□□□ -1.84
VMR1YHL035C DBP1P24784 617 aaKnown RBP3.53□□□□□ -1.84
VMR1YHL035C GUT1P32190 709 aa3.52□□□□□ -1.85
VMR1YHL035C VMA1P17255 1071 aaKnown RBP3.52□□□□□ -1.85
VMR1YHL035C MSB4Q12317 492 aa3.52□□□□□ -1.85
VMR1YHL035C MAM3Q12296 706 aa3.51□□□□□ -1.85
VMR1YHL035C SPB4P25808 606 aaPredicted RBP3.5□□□□□ -1.85
VMR1YHL035C MIF2P35201 549 aa3.49□□□□□ -1.85
VMR1YHL035C NUP42P49686 430 aaKnown RBP3.48□□□□□ -1.85
VMR1YHL035C NST1P53935 1240 aa3.48□□□□□ -1.85
VMR1YHL035C GRE2Q12068 342 aaKnown RBP3.48□□□□□ -1.85
VMR1YHL035C PSE1P32337 1089 aaKnown RBP3.48□□□□□ -1.85
VMR1YHL035C HGH1P48362 394 aaKnown RBP3.48□□□□□ -1.85
VMR1YHL035C AI4P03878 556 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms