RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W MTC1P47018 478 aaKnown RBP12.09□□□□□ -0.47
YCK3YER123W FAP1P53971 965 aa11.85□□□□□ -0.51
YCK3YER123W PRY3P47033 881 aa11.16□□□□□ -0.62
YCK3YER123W AAD16Q02895 342 aa10.73□□□□□ -0.69
YCK3YER123W PRI1P10363 409 aa10.66□□□□□ -0.7
YCK3YER123W HAA1Q12753 694 aaKnown RBP10.46□□□□□ -0.74
YCK3YER123W YCK3P39962 524 aa10.45□□□□□ -0.74
YCK3YER123W DRS1P32892 752 aaKnown RBP10.42□□□□□ -0.74
YCK3YER123W ISW2Q08773 1120 aa10.23□□□□□ -0.77
YCK3YER123W RPG1P38249 964 aaKnown RBP10.11□□□□□ -0.79
YCK3YER123W TSR3Q12094 313 aaKnown RBP10.01□□□□□ -0.81
YCK3YER123W MRPL32P25348 183 aa9.67□□□□□ -0.86
YCK3YER123W YGL015CP33199 130 aa9.53□□□□□ -0.88
YCK3YER123W DIP2Q12220 943 aaPredicted RBP9.45□□□□□ -0.9
YCK3YER123W RSE1Q04693 1361 aaKnown RBP9.39□□□□□ -0.91
YCK3YER123W REB1P21538 810 aa9.2□□□□□ -0.94
YCK3YER123W BUD31P25337 157 aaPredicted RBP9.15□□□□□ -0.95
YCK3YER123W RPL17AP05740 184 aaKnown RBP9.13□□□□□ -0.95
YCK3YER123W RPL17BP46990 184 aaKnown RBP9.13□□□□□ -0.95
YCK3YER123W CDC27P38042 758 aa8.99□□□□□ -0.97
YCK3YER123W UBP10P53874 792 aaPredicted RBP8.9□□□□□ -0.98
YCK3YER123W AVT3P36062 692 aa8.85□□□□□ -0.99
YCK3YER123W MAP2P38174 421 aaKnown RBP8.82□□□□□ -1
YCK3YER123W YKR023WP36119 530 aaKnown RBP8.76□□□□□ -1.01
YCK3YER123W SPT21P35209 758 aa8.66□□□□□ -1.02
YCK3YER123W SIS1P25294 352 aaKnown RBP8.59□□□□□ -1.03
YCK3YER123W TFC8Q12308 588 aa8.59□□□□□ -1.03
YCK3YER123W HOP09932 586 aa8.57□□□□□ -1.04
YCK3YER123W TIF4632P39936 914 aaKnown RBP8.56□□□□□ -1.04
YCK3YER123W UBP9P39967 754 aa8.55□□□□□ -1.04
YCK3YER123W DCD1P06773 312 aa8.54□□□□□ -1.04
YCK3YER123W TGL3P40308 642 aa8.52□□□□□ -1.04
YCK3YER123W SCY1P53009 804 aa8.49□□□□□ -1.05
YCK3YER123W SLX5P32828 619 aaKnown RBP8.46□□□□□ -1.06
YCK3YER123W BCH2P36122 765 aa8.27□□□□□ -1.09
YCK3YER123W BFR2Q06631 534 aaKnown RBP8.26□□□□□ -1.09
YCK3YER123W RIM101P33400 625 aa8.18□□□□□ -1.1
YCK3YER123W MST1P07236 462 aa8.05□□□□□ -1.12
YCK3YER123W YBL029C-AQ3E756 94 aa8.04□□□□□ -1.12
YCK3YER123W EPS1P40557 701 aa8.01□□□□□ -1.13
YCK3YER123W BDF1P35817 686 aa8□□□□□ -1.13
YCK3YER123W YOR238WQ08634 303 aa7.99□□□□□ -1.13
YCK3YER123W VNX1P42839 908 aa7.93□□□□□ -1.14
YCK3YER123W NSR1P27476 414 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
YCK3YER123W SPP1Q03012 353 aa7.87□□□□□ -1.15
YCK3YER123W OXP1P28273 1286 aa7.86□□□□□ -1.15
YCK3YER123W YAP5P40574 245 aa7.82□□□□□ -1.16
YCK3YER123W PTP3P40048 928 aa7.81□□□□□ -1.16
YCK3YER123W YIL055CP40523 627 aaKnown RBP7.8□□□□□ -1.16
YCK3YER123W YJL171CP46992 396 aa7.8□□□□□ -1.16
YCK3YER123W WSC3Q12215 556 aa7.79□□□□□ -1.16
YCK3YER123W AIR2Q12476 344 aaKnown RBP7.77□□□□□ -1.17
YCK3YER123W BBC1P47068 1157 aa7.76□□□□□ -1.17
YCK3YER123W TIF11P38912 153 aaKnown RBP7.73□□□□□ -1.17
YCK3YER123W FKH1P40466 484 aa7.73□□□□□ -1.17
YCK3YER123W GTT3P39996 337 aa7.68□□□□□ -1.18
YCK3YER123W RSM7P47150 247 aa7.67□□□□□ -1.18
YCK3YER123W AI2P03876 854 aa7.66□□□□□ -1.18
YCK3YER123W BMT6Q12291 365 aa7.61□□□□□ -1.19
YCK3YER123W LDB19Q12502 818 aa7.61□□□□□ -1.19
YCK3YER123W ULI1P43604 169 aa7.59□□□□□ -1.2
YCK3YER123W IOC2Q12072 812 aa7.56□□□□□ -1.2
YCK3YER123W YAH1Q12184 172 aaKnown RBP7.51□□□□□ -1.21
YCK3YER123W MSB4Q12317 492 aa7.47□□□□□ -1.21
YCK3YER123W EAP1P36041 632 aaKnown RBP7.46□□□□□ -1.21
YCK3YER123W PIB1Q06651 286 aa7.46□□□□□ -1.21
YCK3YER123W RTG1P32607 177 aa7.4□□□□□ -1.22
YCK3YER123W NCR1Q12200 1170 aa7.39□□□□□ -1.23
YCK3YER123W PSD2P53037 1138 aaKnown RBP7.36□□□□□ -1.23
YCK3YER123W TRP5P00931 707 aaKnown RBP7.35□□□□□ -1.23
YCK3YER123W YLR271WQ06152 274 aa7.35□□□□□ -1.23
YCK3YER123W YOL036WQ08206 761 aa7.35□□□□□ -1.23
YCK3YER123W SET4P42948 560 aa7.34□□□□□ -1.23
YCK3YER123W MRM1P25270 412 aa7.33□□□□□ -1.24
YCK3YER123W YNL035CP53962 389 aaKnown RBP7.33□□□□□ -1.24
YCK3YER123W SEC61P32915 480 aa7.33□□□□□ -1.24
YCK3YER123W TFG1P41895 735 aaPredicted RBP7.27□□□□□ -1.25
YCK3YER123W YMR1P47147 688 aaKnown RBP RIP-Chip data7.25□□□□□ -1.25not detected
YCK3YER123W RGA2Q06407 1009 aa7.25□□□□□ -1.25
YCK3YER123W DBP1P24784 617 aaKnown RBP7.23□□□□□ -1.25
YCK3YER123W BCK2P33306 851 aa7.21□□□□□ -1.25
YCK3YER123W VMA1P17255 1071 aaKnown RBP7.2□□□□□ -1.26
YCK3YER123W SAM3Q08986 587 aa7.2□□□□□ -1.26
YCK3YER123W SAP30P38429 201 aa7.19□□□□□ -1.26
YCK3YER123W VPS29P38759 282 aa7.18□□□□□ -1.26
YCK3YER123W YFR006WP43590 535 aa7.17□□□□□ -1.26
YCK3YER123W CHL1P22516 861 aaPredicted RBP7.16□□□□□ -1.26
YCK3YER123W JIP4Q03361 876 aa7.16□□□□□ -1.26
YCK3YER123W DAN4P47179 1161 aa7.15□□□□□ -1.27
YCK3YER123W TFA1P36100 482 aa7.14□□□□□ -1.27
YCK3YER123W RTG3P38165 486 aa7.14□□□□□ -1.27
YCK3YER123W YDL129WQ07555 291 aa7.14□□□□□ -1.27
YCK3YER123W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.14□□□□□ -1.27not detected
YCK3YER123W ABP1P15891 592 aaKnown RBP7.12□□□□□ -1.27
YCK3YER123W STS1P38637 319 aa7.12□□□□□ -1.27
YCK3YER123W PRE3P38624 215 aa7.11□□□□□ -1.27
YCK3YER123W SSP1P38871 571 aa7.07□□□□□ -1.28
YCK3YER123W GYP5Q12344 894 aa7.07□□□□□ -1.28
YCK3YER123W HTA1P04911 132 aaKnown RBP7.05□□□□□ -1.28
YCK3YER123W HTA2P04912 132 aa7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms